Novosphingobium capsulatum: U0041_11405
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Entry
U0041_11405 CDS
T10206
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ncp Novosphingobium capsulatum
Pathway
ncp01501
beta-Lactam resistance
ncp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
U0041_11405
01503 Cationic antimicrobial peptide (CAMP) resistance
U0041_11405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncp02000
]
U0041_11405
01504 Antimicrobial resistance genes [BR:
ncp01504
]
U0041_11405
Transporters [BR:
ncp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
U0041_11405
Antimicrobial resistance genes [BR:
ncp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
U0041_11405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
WQD91620
LinkDB
All DBs
Position
2500874..2504128
Genome browser
AA seq
1084 aa
AA seq
DB search
MLQLVKLALSKPYTFVVLAILIVLSGSIAWLRTPTDIFPDIRIPVIAAVWQYRGLPPEDM
AGRVVYYYERSLTSTVNDIDHIESQSMNGVGVVKIFFRPGVDIRTATAQVTSVSQTVLKQ
MPPGITPPLILNYSAATVPILQMALSSGKLSEQAIYDLGQNGIRPRLATVQGAAVPSPYG
GRERQIQIDLDPAALLQHNLSAADVGAALAAQNQIVPAGTTKIGEFEYSIRLNNSPQVID
QLNALPIRTVDGTTVTIGDVAHVHDGSPPQVNEVRVDGGRAVLMTILKSGSASTVDIVND
VKALLPKLKETLPDSLKIQLLSDQSLFVKAAVSGVVREGVLAAALTSLMILLFLGSWRST
VIIATSIPLAILAAVAGLAVTGETLNIMTLGGLALAVGILVDDATVTIENINWHLEQGKG
VAEAIMDGAEQIVRPAFVSLLCICIAFLPMFFLPGVAGFLFAPMAKSVVFAMIASFVLSR
TLVPTMSNFLLRAHGSEHAVDIMVSHDAMTGQKPGMHPLRRFQHGFETRFEAIRAWYVDV
LRAALDSRRRFVPGFMIVVLASLVLVPFLGRNFFPSVDSGQISLHVRAPVGTRLEETAAL
FDKVEDQIRATVPRDELVSIVDNIGMSSSGINTAYANSGSIGAQDGDILVTLAEDHRPTA
GYVRALRERLPHLFPGTTFSFLPADIISQILNFGAPAPIDVMVTGPDTKANADYARMLAG
RINRVAGIADVRMQQATNAPELRFDIDRAQADRLGVTENDVTKSLSVNLAGSAQVAPTFW
LNPKNGVSYPIVVQTPQYRTDSIGALDNIPVSSARPGSVQLLGALGTMTREPTAALISHY
AVQPAFDVYATTQGRDLGAVAGDVQKILNDTAASLPKGSTVKIRGQVETMNAAFTGLVLG
LVGAIVLIYLLIVVNFQSWIDPAVIVSALPAALAGIAWTLFATHTPLSVPALTGAIMCMG
VATANSVLVVSFARERLAVLGNATLAAIEAGSTRFRPVLMTALAMIIGMAPMALGLGEGG
EQNAPLGRAVIGGLICATIATLVFVPVVFSIVHRKERRGGATSQPTPPPSDDPTFIKGDL
VHAE
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaattggtcaagcttgcgctcagcaagccatataccttcgtcgtcctggccatc
ctgatcgtgctttcgggttcgatcgcctggctacgcacccccaccgacatctttcccgat
atccgcatcccggtgattgccgcggtgtggcagtatcgcgggctgccgcccgaagacatg
gccggccgggtggtctattattacgaacgctcgctcacctcgacggtcaacgatatcgat
catatcgaaagccagtcgatgaacggcgtgggtgtggtcaagattttcttccgtcccggc
gtcgatatccgcacggcgaccgcgcaggtcacctcggtgtcgcaaaccgtgctcaagcag
atgccgcccggcatcacgccgccgctgatcctcaactacagtgcggccacggtgccgatc
ctgcagatggcgctgtcttcgggcaagctttccgaacaggcgatctatgacttggggcag
aacggcattcgcccgcgcctggccacggtgcagggcgcggccgtgccatcgccctatggc
ggccgcgaacgccagatccagatcgacctcgatcccgccgcgctgttgcagcacaatctc
tctgccgcagacgtcggcgccgcgctcgccgcgcagaaccagatcgtgcccgccggcacc
accaagatcggcgagttcgaatattccatccgcctcaacaacagcccgcaggtaatcgac
cagctcaacgcgctgccgatccgcacggtcgatggcaccacggtgacgatcggtgacgtt
gcccacgtgcacgatggttcgccgccgcaggtgaacgaagtgcgcgtggatggcgggcgc
gcggtcttgatgacgatcctcaagtcgggctcggcctcgaccgtcgatatcgtcaacgac
gtcaaggcgctgctgcccaagctcaaggaaacgctgcccgacagcctcaagattcagctg
ctgtcagaccagtcgctgttcgtgaaggcggccgtttcgggcgtggtgcgcgaaggcgtg
ctggcggcggccctgaccagcctgatgatcctgctgttcctgggctcgtggcggtcaacc
gtgatcatcgccacctcgatcccgctggcgattctcgccgccgtggcgggcctggcggtg
accggcgaaacgctcaacatcatgacgctgggtggcctggcgcttgccgttggcatcctc
gtggacgacgccaccgtcaccatcgaaaacatcaactggcacctcgaacagggcaagggc
gtggctgaggcgatcatggacggggccgagcagatcgtgcgcccggccttcgtctcgctg
ctgtgcatctgcatcgcgttcctgccgatgttcttcctgcccggcgtggccggcttcctg
tttgccccgatggccaagtcggtggtctttgcgatgatcgccagcttcgtgctgtcgcgc
acgctggtcccgaccatgagcaacttcctgttgcgcgcgcatggttcggagcatgccgtg
gacatcatggtcagccatgatgccatgaccgggcaaaagcccggcatgcacccgctgcgc
cggttccagcatggctttgaaacccggttcgaggcgatccgcgcctggtatgtggacgtg
ctgcgcgctgcgctcgacagccgccggcgtttcgtgcccgggttcatgatcgtggtgctg
gcctcgttggtgctggtgccgttcctcgggcgcaacttcttccccagcgtcgattccggc
cagatcagcctgcacgtgcgcgcgccggtcggcacgcgcctggaagaaaccgctgccttg
ttcgacaaggtggaggaccagatccgcgccaccgtgcctcgcgatgagctggtgtcgatc
gtcgacaacatcggcatgtcgtcttcgggcatcaacaccgcctatgccaacagcggcagt
atcggtgcgcaggatggcgacattctggtgaccctggccgaagatcaccggccgaccgcc
ggctatgtccgcgccctgcgtgaacgtctgccgcatctgttccccggcaccacgttttcg
ttcctgccggccgacatcatcagccagatcctcaacttcggcgcgcccgccccgatcgac
gtgatggtgaccgggcccgataccaaggccaacgccgattacgcgcggatgctggccggc
cgcatcaaccgtgtggccgggattgccgatgtgcgcatgcagcaggcgaccaatgccccg
gaactgcgctttgacatcgatcgtgcccaagccgatcggcttggcgtgaccgaaaacgac
gtgaccaagagcctttcggtcaatcttgccggcagtgcgcaggtggcgcccacgttctgg
ctcaatcccaaaaacggcgtgtcctatccgatcgtggtgcagaccccgcaataccgcacc
gacagcatcggcgcgctcgacaacatcccggtcagttcggcccggcccggttcggtccag
ctgctgggtgccctgggcaccatgacgcgggagccaacggcggcgctgatttcgcactat
gcggtgcagccggcgttcgacgtctatgccaccacccaagggcgcgatctgggcgccgtg
gcgggcgacgtgcagaagatcctgaacgatacggccgccagcctgcccaagggttcgacc
gtaaagatccggggccaggtggaaaccatgaacgcggccttcaccgggctggtcctgggt
ctggttggcgcgatcgtgctgatctacctgctgatcgtggtcaacttccagagctggatc
gatccggcggtgatcgtttcggccctgccggctgcgcttgccgggattgcctggacgctg
tttgccacgcacacgccgctatcggtgccggccttgaccggggcgatcatgtgcatgggc
gtggccacggccaactcggtgctggtggtcagctttgcccgcgaacgcctggccgtgctg
ggcaatgccaccctggccgcgatcgaagccggttccacccgcttccgcccggtgctgatg
acggcgctggccatgatcatcggcatggcgccgatggcgctcggcctgggcgaggggggc
gaacagaacgccccgctcggccgcgccgtgatcggcggcctgatctgcgccaccattgcc
acgctggtgttcgtgcccgtggtcttctccatcgtccatcgcaaggaacgccggggcggc
gccacgtcgcagcccaccccgccgccgtccgatgatcccactttcatcaagggagacctt
gtccatgcagaatga
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