Novosphingobium capsulatum: U0041_11410
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Entry
U0041_11410 CDS
T10206
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ncp Novosphingobium capsulatum
Pathway
ncp01501
beta-Lactam resistance
ncp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
U0041_11410
01503 Cationic antimicrobial peptide (CAMP) resistance
U0041_11410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncp03036
]
U0041_11410
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncp02000
]
U0041_11410
01504 Antimicrobial resistance genes [BR:
ncp01504
]
U0041_11410
Chromosome and associated proteins [BR:
ncp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
U0041_11410
Transporters [BR:
ncp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
U0041_11410
Antimicrobial resistance genes [BR:
ncp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
U0041_11410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
BSH_CzcB
RND-MFP_C
HH_MFP_RND
BSH_RND
BSH_CusB
CzcB_C
Hjc
Motif
Other DBs
NCBI-ProteinID:
WQD91621
LinkDB
All DBs
Position
2504118..2505320
Genome browser
AA seq
400 aa
AA seq
DB search
MQNETSLVVGQEDAPARAPRGLKTAGIVAGVVAAVIVGVGIYSRHGEALDTRNWSEAQAI
PTVHLVDVTPAAASGALSLPGTMAAWNTAHIFARVPGYMQAWTRDIGATVGQGTPLAQIE
TPELDQQIAAARAALAKAKASAGLARSTAARWNDLLTDHSVSQQEADERNGNLAVQVATV
RGAEADLARLLAMKGYATVRAPFAGVVTQRTADIGDLVGPGATNQQPMFTVADVSRIRIY
VGVPQTYAAAMKPGVEATLTVPDLPGQTFAAKVVGTSDAINPQNGALQVQLLADNTAHAL
RAGGFAQVAFKVPGSAGAVMIPSSALLFRSAGTQVATVGSDGRVRLLSITLGRDLGKTVE
VVSGLSAGTKIIDNPPDSIANGEAVHVAHAGANGGGGQHA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatgaaaccagcctggtcgtgggccaggaagacgccccagcgcgcgcgccgcgc
gggctcaagaccgccggcatcgttgctggcgtggtggccgccgtcatcgtgggcgtgggc
atctacagccgccatggcgaggcactagacacccgcaactggagcgaggcgcaggccatt
cccaccgttcacctggtggacgtgacgccggccgcagccagcggcgcgctcagcctgcct
ggcaccatggcggcgtggaacaccgcgcatatctttgcccgcgtgcctggctacatgcag
gcctggacgcgcgacatcggcgccaccgtgggccagggcacccccctggcgcagatcgag
acgcccgagcttgaccagcagatcgcggccgcccgcgctgcgctggccaaggccaaggcc
agcgcgggcctggcgcgcagcacggcagcgcgctggaacgacctgttgaccgaccattcg
gtttcgcagcaggaagccgacgagcgcaacggcaacctggcggttcaggttgccaccgtg
cgcggggccgaggcagatcttgcccggcttctggcgatgaagggctatgccacggtgcgc
gcgccctttgccggcgtggtgacccaacgcactgccgacatcggcgatctggtggggcct
ggtgccaccaaccagcagccgatgtttaccgtggccgacgtcagccgcatccgcatctac
gtgggcgtgccgcagacctatgccgccgcgatgaaaccgggcgtggaagcgaccctgacc
gtgcccgatctgccgggccagacgtttgccgccaaggttgtcggcacgtcggatgcgatc
aatccgcagaacggcgccttgcaagtgcagttgctggccgacaataccgcccacgcgctg
cgcgcaggcggctttgcccaggtggcgttcaaggtgccgggcagcgcaggggcggtcatg
atcccgtctagcgcgctgctgttccgctctgccggcacccaggtggccacggtgggcagc
gatggccgggtgcggctgctgtcgatcacgctcggccgcgatctgggcaagacggtggaa
gtggtcagtggcctgtccgccgggaccaagatcatcgacaacccgccggattcgatcgcc
aacggcgaagcggtgcatgtcgcccatgccggtgcaaacggtgggggcggccagcatgcc
tga
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