Novosphingobium capsulatum: U0041_14985
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Entry
U0041_14985 CDS
T10206
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ncp Novosphingobium capsulatum
Pathway
ncp01501
beta-Lactam resistance
ncp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
U0041_14985
01503 Cationic antimicrobial peptide (CAMP) resistance
U0041_14985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncp02000
]
U0041_14985
01504 Antimicrobial resistance genes [BR:
ncp01504
]
U0041_14985
Transporters [BR:
ncp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
U0041_14985
Antimicrobial resistance genes [BR:
ncp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
U0041_14985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WQD92283
LinkDB
All DBs
Position
3302690..3305845
Genome browser
AA seq
1051 aa
AA seq
DB search
MLSRFFANRPIFAWVIAIVVMAAGAFSITTMGVEQYPDIAPPTVSISATYNGADAQAVEN
SVTQVLEQQLKGIDGMLYFTSTSSNGSANITTTFEKGTNPDTAQVQVQNAISRATSRLPT
VVQQQGVTVTKAQNDQLLVMALYDTTGRSTNADIADYLTTRIQDPLSRVEGVGSADVYGS
SYAMRIWLDPAKLAAVNLMPSDVNAALTAQNTQVAAGEVGALPAPQGQRLDATVTARSRL
QTVDDFKKVILKTSADGGEVRLSDVARVEMGQESYSSINTLNGSAATGIAVSLASGANAM
KTAQLVKAKIDELAKSMPEGYQISYPRDSSTFVKISIEEVVKALLEAIALVVVVMFLFLQ
NWRATLIPAIAVPVVLLGTFGILALLGYTINTLTMFGLVLAIGLLVDDAIVVVENVERVM
HEEHLSPLDATVKSMGEITSALIGITLVLTAVFIPMAFFGGSTGAIYRQFSITIVSAMGL
SVLVALILTPALCATLLKAEEKPHGRFFTGFNRRYDRLQEGYQNRLGGIVGRPLPWMLAF
VAIIGAMVFLYTRLPTSFLPDEDQGQLMMSYTLPVGSTMEQTQAVAKQAQDIIQQTEGNN
IRAVFIIAGRGQGGSGQNTGQGFILLKDWDERAGSDNSAAGISARLNKLFAQKLGNKAQI
FVLSPPAIRGLGNSAGFDMYLQDSAGQGRTALTAARKQLVDDANGSGRVAQARLQGLEDT
PQLNVALNDEAITAFQIAPADVNSTLSTAWGGTYVNDFVDRGRVKKVFVQGDAPYRSKPQ
DLGQWYVRGSDGQMAPFAAFAQTNWTVGAPVLPRFNGIAAQEVVGNPANGISSGQAMQTM
EDLAGKLNGGYSVAWAGLSYQERAASSQTGLLYGASIFFIFLCLAALYESWSVPVSVLLV
IPLGVIGAVLAVTLRGFNNDIYFQVALLTTIGLSAKNAILIVEFAEAALHRGVAPMEAAL
EAARLRFRPIIMTSVAFIAGVIPLAVASGAGANGRRAIGTGVLGGMLSATLLAIFLVPLF
FVLVKRVFARGKNGKDTPPADSHAMDKEPQA
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgcgcttctttgccaatcgcccgatctttgcctgggtcatcgctattgtggtg
atggctgcgggcgccttttccatcaccaccatgggggtggaacaataccccgacattgcc
ccgccaaccgtttcgatcagcgccacctacaacggggctgatgcgcaggcggtggaaaac
agcgtgacgcaggtgcttgagcagcagctcaagggcatcgacggcatgctctatttcacc
tcgaccagcagcaatggctcggccaacatcaccaccacgttcgagaagggcaccaacccc
gatacggcgcaggtgcaggtgcagaacgccatttcgcgcgcgaccagccgcctgcccacc
gtggtgcagcagcagggcgtgacggtgaccaaggcgcagaatgaccagctcttggtcatg
gcgctttatgacaccaccggccgcagcaccaatgccgacatcgccgactatctgaccacg
cgcatccaggacccgctctcgcgcgtcgaaggcgtgggctcggccgacgtctatggttcg
tcctatgccatgcgcatctggctcgatccggccaagcttgccgcggtcaacctgatgccg
tccgacgtgaacgccgcgctgaccgcgcagaacacccaggtcgccgccggcgaagtgggc
gccctgcccgcgccgcaaggccagcgcctcgatgccacggtcaccgcgcgttctcgcctg
cagacggtggatgatttcaagaaggtcattctcaagaccagcgccgatggcggtgaagtg
cgcctgtccgatgtggcgcgcgtggagatgggccaggaaagctattcctcgatcaacacg
ctcaacggcagtgcggccaccggtatcgcggtcagccttgcctcgggcgcgaacgcgatg
aagacggcgcagctggtcaaggccaagatcgacgagctggccaagtctatgcccgaaggc
taccagatctcgtatccgcgcgattccagcaccttcgtcaagatctcgatcgaggaagtg
gtcaaggccctgctcgaagcgatcgcgctggtcgtggtggtgatgttcctgttcctgcag
aactggcgcgccacgctgatcccggcgatcgcggttccggtggtgctgctcggcaccttc
ggcatcctggcgctgctgggctataccatcaatacgctgaccatgttcggcctggtgctg
gccatcggcctgctggtcgacgatgccatcgtcgtggtcgaaaacgtcgagcgcgtgatg
cacgaggagcatctttcgccgctcgatgccacggtcaagtcgatgggcgagatcacttcg
gcgctgatcggcatcaccctggtgctgaccgccgtgttcatccccatggccttctttggc
ggatcgactggtgcgatctatcgccagttctcgattaccatcgtttcggcgatggggctt
tccgtgctggtcgctttgatcctgaccccggcactgtgcgccacgctgctcaaggcggag
gaaaagccgcacggccgcttcttcaccggcttcaaccgtcgctatgaccggttgcaggaa
ggctatcagaaccgtctgggcgggatcgtgggccgccccttgccgtggatgctcgccttc
gtggcgatcatcggcgcgatggtgttcctctatacccgcctgcccaccagcttcctgccc
gatgaggaccagggccagttgatgatgagctataccctgccggtcggctccaccatggag
cagacccaggccgtggccaagcaggcacaggatattatccagcagaccgaaggcaacaat
atccgcgcggtgttcatcatcgccgggcgtggccagggtggctcaggccagaataccggc
cagggcttcatcctgctcaaggactgggacgagcgcgccggcagcgacaacagcgctgcg
ggcatttccgcccgcctcaacaagctgttcgcccagaagctaggcaacaaggcgcagatc
ttcgtgctgtcgccgccggccattcgcggcttgggcaattcggccgggtttgacatgtat
ctgcaggacagcgccggccagggccgcaccgcgctgaccgccgcacgcaagcagctggtc
gatgatgccaatggcagtggccgcgtcgcgcaagcccgcctgcagggcctggaagatacg
ccgcagctcaatgtggcgctcaacgacgaggcgatcaccgccttccagatcgcgccggca
gacgtgaactccacgctgtcgaccgcctggggcggcacctatgtcaacgacttcgtcgac
cgtggccgcgtgaagaaggtcttcgtccagggcgatgcgccctatcgcagcaagccgcag
gacctgggccagtggtatgtgcgcggctctgacgggcagatggcgccgtttgccgccttt
gcccagaccaactggaccgtcggcgccccggtgctgccgcgcttcaacggcatcgcggcg
caggaagtggtgggcaatccggccaatggcatcagttcgggccaggccatgcagaccatg
gaagacctcgccggcaagctcaatggcggctacagcgtggcgtgggcgggcctgtcgtat
caggaacgcgccgccagcagccagaccggcctgctctatggcgcgtcgatcttcttcatc
ttcctgtgcctggcggcgctttatgaaagctggtcggtgccggtatcggtgctgctggtc
attccgctcggcgtgatcggcgccgtgctcgccgtgacgctgcgcgggttcaacaacgac
atctatttccaggtggcgctgctcaccaccatcgggctttcggccaagaacgcgatcctg
atcgtggaatttgccgaggcggcgctgcatcgcggtgttgcccctatggaagccgcactg
gaagcggcgcggctgcgcttccgcccgatcatcatgacgtcggtggcgttcatcgccggt
gtcattccgctcgcggtggcgagcggggccggcgccaacggccgccgcgcgatcggcacc
ggtgtgctgggcgggatgctgtcggccacgctgctggcgatcttcctggtgccgctgttc
ttcgtgctggtgaagcgcgtcttcgctcgcggcaagaacggcaaggacacgcccccggcc
gatagccacgccatggacaaggagccgcaggcatga
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