Neurospora crassa: NCU06264
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Entry
NCU06264 CDS
T01034
Symbol
mus-53
Name
(RefSeq) mutagen sensitive-53
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ncr
Neurospora crassa
Pathway
ncr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NCU06264 (mus-53)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncr03400
]
NCU06264 (mus-53)
Enzymes [BR:
ncr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
NCU06264 (mus-53)
DNA repair and recombination proteins [BR:
ncr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
NCU06264 (mus-53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
BRCT_2
DNA_ligase_A_C
BRCT
FAM171A1-2-B_C
TSC22
Motif
Other DBs
NCBI-GeneID:
3879007
NCBI-ProteinID:
XP_962868
UniProt:
Q7SB49
LinkDB
All DBs
Position
III:complement(2116850..2120498)
Genome browser
AA seq
1050 aa
AA seq
DB search
MNTNRRSRSPDEEALEEDQHQYGAGTLSLEELDEHFPNRPRNHSKTFPFSDLFRTLFNPL
IDCKPSTSGGTVRGPKPGRGGHFSKVSYHEQRRHIIERFMSRWRSEVGNDFYPAMRLILP
DKDRDRGVYGLKENTIGKLLVKVMKIDRNSEDGYNLMHWKLPGGQSGVSRSVGDFAGRCL
EVVSKRAMRAQPGDLTIADVNVLLDRLAAASGEAEQLPIFEEFYRQMNAEEMMWLVRIIL
KDMRVGATERTFLNLWHPDAEALFSVSSSLRRVCWELFDPEFRLEQQETGIKLMQCFQPQ
LAQFQMTTTWEKLVKNLGVTEENPEFWIEEKLDGERMQMHMIEDDTVPGGFRFAFWSRKA
KDYTYLYGESLGDEQSALTRHLHKAFDDGVRNLILDGEMITWDIDIDKMVPFGTLKTAAL
EQQKNPSKAGPRPLYRVFDILLLNDKPLTEYTLNDRRRALERAVVGVHRRLEILPFERAT
SPDAIEPLLRRVVAEASEGLVLKNPRSRYSLNSRNNDWIKVKPEYMSDFGESLDCVVVGG
YFGSGRRGGTLSSFLCGVRVSQNFIKSGNASAEKCLSFVKVGGGFKAEDYAEIRHHTEGK
WQDWDPSSPPTEYIELGGGEKLQYEKPDVWIRPSDSVVISVKAASITQSDQFAMGWTLRF
PRFRKLRLDRAWDSALDMDEFEVLRSKIKDQEQERKKMEMENRKRKPATKRARKDLVIAG
MSDPSSSSAATPVIAPKETREASKRLFEGLDFCVLSDSLKPNKMTKPALEKLIKDHGGRI
HQQVMDHSGQGKIIIPIADKNVIKVASLRKANPEMDIIRPKWIFDCLVQPMPFTKQKENK
KGYLLPFEPTHLFHSGSEETSEEAEQAVDKFGDSYAGDLADINELKAIMEGMESDDYVSD
SDWDSDSGRGRGGGDGFDMNHFLDHLEEQGTSLDDLRSFMFRRCRVFFALPSAGNGDGAA
ESKALRLKNYIRFGNGKVVDELETATHVVVVTAPLGESSKKEEREIAAELRYKISLREMG
SPMPRIVKGEWVEDSWKEGTVVDEEEYVAG
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgaataccaacaggcgatccagatcgccagatgaggaggcattggaagaggaccaacat
cagtacggggcaggtactctaagcctagaagaacttgatgagcacttccctaacagacca
cgaaaccactccaaaaccttcccattctctgacctctttcgaaccctcttcaaccctctc
attgactgcaaaccctcaacctctgggggtacggtgcgcggccccaaaccaggacgaggc
ggccacttctccaaggtctcctaccatgaacagcgccggcacatcatcgagcgcttcatg
tcgcgctggcggtccgaagttggcaacgacttttacccggccatgcgcctcatcctcccc
gacaaggaccgcgaccgcggcgtgtatgggttgaaggagaacaccatcggcaagctgctg
gtcaaagtcatgaagattgatcggaactcggaggatgggtataacctcatgcactggaag
ctgccggggggccagagtggggtgagccggtctgtaggggactttgcgggccgctgtttg
gaagtggtcagcaagcgcgcgatgcgtgctcagccgggggacttgacgattgcggatgtc
aatgtcctgttggatcgcttggcggcggcaagcggggaggccgagcagttaccgatcttt
gaggagttttatcggcagatgaatgcggaggagatgatgtggttggtgaggatcatattg
aaggatatgagggtgggcgccacggaaaggacgtttctgaacctgtggcatccggatgcc
gaggcgctgttcagcgtttcgtcgagcttgcggagagtgtgttgggagctgtttgatcca
gagtttcggctggaacagcaggagacggggattaagctgatgcagtgctttcagccgcag
ctggcgcagtttcagatgacgacgacgtgggagaagttggtgaaaaatttgggggtgacg
gaggagaatccggagttctggatcgaggagaagttggatggcgagaggatgcagatgcat
atgatagaggatgataccgtgcccggaggatttcggtttgccttttggtcgagaaaggcg
aaggattatacttatctctatggtgagagcttgggagatgagcagtccgctctgacacgg
catctgcacaaggcctttgacgacggcgtgcgaaatttgattctcgacggagagatgatt
acttgggatatcgatatcgacaaaatggtaccctttggaacgctcaagacggccgcgttg
gagcaacaaaagaacccatccaaggctggtcctcgcccgctctaccgtgtctttgacatc
ctgctgctaaacgacaagccccttaccgaatacaccctcaacgaccggcggagagctctc
gagcgtgccgtcgtcggtgtccaccgccgcttggaaattcttcccttcgagcgagccacc
tccccagacgctattgagccactcttgcgacgagtcgtggccgaagcatcggagggtctt
gttctcaagaacccgcgctctcgctattcactcaacagccgtaacaacgactggatcaag
gttaaaccggagtacatgtccgactttggcgaatcactcgactgcgttgtggtgggcggg
tactttggctccggccggcgcggcggcacgctctcctccttcctctgcggtgtgcgcgta
tcccagaacttcatcaaaagcggcaacgccagcgccgagaagtgcctctccttcgtcaaa
gtaggcggcggcttcaaagcggaggactacgccgaaatccggcaccacaccgaaggcaaa
tggcaggactgggacccttccagcccaccaacggagtacatcgagctcggcggcggggaa
aagttacagtacgagaagccggacgtgtggatccgacccagcgactcggtcgtcatctcg
gtcaaggccgccagcatcacacaatcggaccagttcgccatgggttggacgctgcggttt
ccgcgcttccgcaaactgcggctggatcgcgcgtgggactcggcgctggacatggacgag
tttgaagtgttacgatccaaaatcaaggaccaggaacaggaaaggaagaagatggagatg
gagaaccgcaagcggaaaccggcgaccaagcgagcgaggaaggacctagttattgcgggg
atgtctgatccttcgtcttcttctgctgctacacccgtcatcgctccgaaagagacaaga
gaagcgagcaaacggttgtttgaaggcttggatttttgcgtcctttcggattctctgaaa
ccaaacaaaatgactaaaccggctttggagaaactcatcaaagatcacggtggtcgtatt
caccagcaggttatggaccactccggtcaggggaagatcatcatccccatagcagataag
aacgtgatcaaagtggctagtctgagaaaggcgaacccggagatggatatcatccggcct
aaatggatttttgactgtcttgtgcagccaatgccgttcacgaaacaaaaagaaaacaag
aagggctatctcctcccctttgagcccacccacctcttccactctggcagcgaagagacg
tcagaagaagccgaacaagcagtggataaattcggcgatagctacgccggggacttggca
gacataaacgagttgaaggcgatcatggagggtatggagtctgatgattatgtgtccgat
tccgactgggattcggactctggcagaggaagaggaggaggcgatgggtttgacatgaat
catttcctagatcacttggaagagcaggggacttcgttggacgatctacggtcgttcatg
ttccggaggtgtcgagttttctttgctctacccagtgctggtaacggagacggggcagcg
gaaagtaaagccttacgactcaagaactatatacgatttgggaacgggaaggtagttgac
gagctggagacggcgacgcatgtcgttgtcgtgactgctcctttgggggagagttcaaag
aaggaggagagagaaattgcggcggaattaaggtataaaattagcttgagagagatggga
agtccgatgccgaggatcgtcaagggggaatgggtggaggactcgtggaaggaggggacg
gtggttgatgaggaagagtatgtggctgggtga
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integrated database retrieval system
