Neptunomonas concharum: F0U83_04495
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Entry
F0U83_04495 CDS
T06194
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ncu
Neptunomonas concharum
Pathway
ncu00300
Lysine biosynthesis
ncu00550
Peptidoglycan biosynthesis
ncu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
F0U83_04495
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
F0U83_04495
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ncu01011
]
F0U83_04495
Enzymes [BR:
ncu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
F0U83_04495
Peptidoglycan biosynthesis and degradation proteins [BR:
ncu01011
]
Precursor biosynthesis
Amino acid ligase
F0U83_04495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
LpxI_N
DUF1057
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
QEQ98326
UniProt:
A0A5P1RGY4
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All DBs
Position
955270..956763
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AA seq
497 aa
AA seq
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MMQPFNAKTLQELTIAGADDVSANLLVKGICSDSRQVKSGDLFVARDGVAHRGIDFIAQA
AKAGAVAAIVDQHSYPDLESFSFSIPVFKVRNLAQKVSGFAAQMLDNPSSRMTVIGITGT
NGKTSCAHYVAQALNALGIRTAIIGTVGNGFPEALEQATHTTPDAIRLQQLLAALEAQGA
KAVVMEVSSHALDQGRVAGVMFDVVAMTNLSRDHLDYHGSMDAYAHAKARLFTEFDVKQR
VLNLDDDYVKSLAEKLQKASKETVTFSLHTQADVYATSCLLSREGIQLSVNAKGEEHVIN
LPVIGAFNASNILLMLSVLRSLDVPFMDIVGVASQISAVPGRMEVFAKEGMPTVVVDYAH
TPDALEKALQAAREHCQATLWVVFGCGGDRDIGKRAEMARAAEAFADKVVVTSDNPRTES
PEEIIDMIISGFKQPAEVTQCADREEAILWALGQAGKNDLVVIAGKGHEDYQEIMNVKYP
FSDKAVVMGYQQREAHL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagccctttaatgcaaaaacactacaagagttgactattgccggtgcggatgac
gtatcggcaaatttgcttgtaaaggggatatgttctgatagtcgccaagtaaagtctggt
gacctgttcgtggcaagagatggcgtggctcatcgaggtattgattttatcgctcaagca
gcaaaagcgggtgcagttgctgcgattgtggatcagcactcttatcccgaccttgaatca
tttagctttagcatacctgtttttaaggtgcgcaatttagctcagaaagtcagcggcttt
gcagctcagatgctggataatccatcatctcgaatgacagtgattggtataacaggtacg
aatggcaaaacatcttgtgcgcattatgttgctcaagcgctgaatgcattaggtatacgt
actgcgattattggcacggtaggtaatggtttcccggaagctctggagcaagcaacacac
actacacccgatgcaatccgcttgcagcagttattggcagcgcttgaagcgcaaggcgct
aaagcggttgtgatggaggttagctcccacgcgttagatcaggggcgtgttgccggggtt
atgtttgatgtggtggcgatgacaaatttaagccgtgatcaccttgattaccacggatcg
atggatgcttatgctcacgccaaagcacgcctgtttacagaatttgatgtgaagcagcga
gtgctgaatctggatgatgactatgttaagtcattagctgaaaaattacagaaagcctct
aaagaaacggtgactttcagcttgcatacacaggccgatgtgtatgctacttcgtgcttg
ttaagccgggaaggtattcagttatcagtgaatgccaagggtgaagagcacgttattaat
ctacccgtgatcggtgcttttaatgcatccaatattcttttaatgctctctgtattgcgc
tccttagatgtgccgtttatggatattgtgggcgttgcgtcacaaatctccgcggttcct
gggcgaatggaggtatttgctaaggaggggatgccgacggtggttgtggattatgctcat
acacccgatgcgctcgaaaaggcattacaggccgcgcgggagcactgtcaagcaacatta
tgggtcgtgtttggttgcggtggtgatagagatattggtaaacgtgctgaaatggcacgc
gcggcagaggcatttgcagataaagtcgtggtgacgagtgataacccacgtactgaatcg
ccagaagagataatcgatatgattatttcgggctttaagcagcctgctgaggtaacgcag
tgtgccgatcgagaagaagctattttatgggctttaggacaggcagggaaaaacgatctt
gttgttattgccggtaaaggtcatgaggattaccaagagatcatgaacgttaagtatcca
tttagcgataaagccgtggtaatgggctatcagcagagagaggctcacttatga
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