Nostoc carneum: NIES2107_02380
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Entry
NIES2107_02380 CDS
T10358
Name
(GenBank) RND family efflux transporter MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ncw Nostoc carneum
Pathway
ncw01501
beta-Lactam resistance
ncw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ncw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NIES2107_02380
01503 Cationic antimicrobial peptide (CAMP) resistance
NIES2107_02380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncw03036
]
NIES2107_02380
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncw02000
]
NIES2107_02380
01504 Antimicrobial resistance genes [BR:
ncw01504
]
NIES2107_02380
Chromosome and associated proteins [BR:
ncw03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NIES2107_02380
Transporters [BR:
ncw02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NIES2107_02380
Antimicrobial resistance genes [BR:
ncw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NIES2107_02380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
Beta-barrel_YknX
HH_EMRA
RND-MFP_C
YknX_C
CzcB_C
BSH_CusB
Beta-barrel_AprE
WEMBL
LcnD_C
Beta-barrel_RND
Motif
Other DBs
NCBI-ProteinID:
BAY28409
LinkDB
All DBs
Position
complement(300587..302029)
Genome browser
AA seq
480 aa
AA seq
DB search
MILDGNQPHKFSKMPNTIKASQLINSQLHHTSNQEHRRKFPHFCGSSSNLFIACFLGLSL
MTVGCGSSPKESADAQSQGPSTARQGGSATPVDVAIARTENLQTAPEYTGTTTPFRTVSL
RSQVEGRLLALNLDVGDRVKQGQNIGQLDDVLLLTDLKQAEAELASLKSEVARATNQVSN
ARAEVERARLELLQAQADSQRQQQLVKQGAIAEQTAQQARTTAQTAAQALRAATEQVRTE
QQAVAAAQGRVVAQQAVVAQAKERRSYSRLTSPITGVVTEKVTEPGNLLQAGGEVLKIAD
FNQIKVVVQVSELELAQIRVGQSVEVRLDAFPNQTLTGRVTRISPTADATARLIPVEVVI
ANRDGKIGSGLLARVNFATQAAQRVVVPQTAIQKKATNSASSQPKTSKQESDNQTGTLFV
VTNVEGKAKVAARSVTLGKRADGKVEILSGLQPGDRYVVRSGKPLKDGDAVRLSIISEKS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgattttggacggaaatcaaccgcacaaattctcaaaaatgccaaataccatcaaagca
tctcagttaattaactctcagttacaccacacaagtaatcaagaacatagacggaagttt
cctcatttttgtggatcatcgtctaatttatttattgcttgcttcctaggcttgagcttg
atgacagtaggttgtggttcatctcccaaagaatcagccgatgcacaatctcaagggcca
agtactgcaagacaagggggaagcgcaacacccgtagatgtagcgatcgcccgcacagag
aacttgcaaacagcaccagaatacacaggtactaccacacccttccgcacagtctcactg
cgatcgcaagtagaaggaaggctattagctttaaatctagatgtcggagatagagtcaag
caagggcaaaacattggacagttagatgatgtcctcttgctcacagatttaaagcaagca
gaagcagaattagcatctctcaaatcggaagtagcaagggcaacaaatcaggtcagtaat
gcccgcgccgaagtcgaaagggcgcgcttagaattattgcaagcccaagcagactcacaa
cgccagcagcaactagttaaacaaggtgcgatcgccgagcaaactgcccaacaagcccgc
acaacagcccaaacagccgcccaagccctgcgagccgctaccgagcaagtgcgtacagaa
cagcaagccgtcgccgccgcccaaggtagagtcgttgcccaacaagcagtagtcgcccaa
gccaaagaacgccgatcctacagccgtttgacatctcccatcactggtgttgttaccgaa
aaggttacagaaccaggcaatttgctgcaagctgggggtgaagtcttaaaaattgccgac
tttaaccaaataaaagtcgtagtgcaagtttccgaattagaactagcacaaattcgcgtg
gggcaatctgtggaagtccgcttagatgcctttcctaaccaaacattaaccgggagagtg
acacgcatttccccaaccgccgatgctacagctcgtttgataccagtggaagtagtaatt
gccaacagggacggcaaaattggtagcggactcttagcgcgcgttaatttcgccacccaa
gccgcacagcgagtagtagtaccgcaaacagctattcagaagaaagccacaaattccgct
tcttcccaaccaaaaaccagtaaacaagagtcagataaccaaactggaactttgtttgta
gtaactaatgtcgaaggtaaagccaaggtagccgcccgttctgtcaccctggggaaaaga
gctgatggcaaagtcgaaattttatctgggttacaaccaggcgatcgctatgtagtgcgt
agtggtaagccgttaaaagatggagacgctgtgcgtctttcaattatttcagaaaaatct
tag
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