Nostoc carneum: NIES2107_26940
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Entry
NIES2107_26940 CDS
T10358
Name
(GenBank) RND family efflux transporter MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ncw Nostoc carneum
Pathway
ncw01501
beta-Lactam resistance
ncw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ncw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NIES2107_26940
01503 Cationic antimicrobial peptide (CAMP) resistance
NIES2107_26940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncw03036
]
NIES2107_26940
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncw02000
]
NIES2107_26940
01504 Antimicrobial resistance genes [BR:
ncw01504
]
NIES2107_26940
Chromosome and associated proteins [BR:
ncw03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NIES2107_26940
Transporters [BR:
ncw02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NIES2107_26940
Antimicrobial resistance genes [BR:
ncw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NIES2107_26940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
BSH_CusB
BSH_YknX
YknX_C
CzcB_C
HH_MFP_RND
Biotin_lipoyl
RND-MFP_C
RnfC_N
Beta-barrel_RND_2
Peptidase_M23
BSH_CzcB
MG280
HH_EMRA
Vps53_N
CC_Bre1
Motif
Other DBs
NCBI-ProteinID:
BAY30846
LinkDB
All DBs
Position
3387388..3388701
Genome browser
AA seq
437 aa
AA seq
DB search
METPNPKINNSVFRRLSGQQGLLVGLGLGIVLAIGGMTMFSRFGNQRAAAPTQSAPAASA
KNAALPVKVQQVTTSTTEESTNFVGALEAQQKVTLQPQIQGRIENILVSSGQRVQKGTPI
ASLSLDQTQANVASSIAAANAAQAGLKTAQAQLQQAQAQRTKVAANLQLQQTQLNRTQQL
VAEGALATQQLDIARNNVQSAIADLQAADKEVAAANAGIRQAQANIRQAQAGTAAAQVNV
NLKRVVSPINGIVGEFPVKIGDYVSTGQTITTIIQNDALDLNLSVPSNRLKQLRVGLPVQ
LVDPTTQQVIGTGAINYISPTVSSNQQSILSKARFNNSPGRLRDGQYVQARIIWNRQPGV
LIPTVAISRIGGQSFVFVTENTTVNGKPQQIVHQRLVRLGDIQGTNYQVLEGLKPGETIV
TSGILKLREGTPIQPQS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcctaatccgaaaatcaataattccgtttttagaaggctttcaggacagcaa
gggctgctggtagggttgggactgggtatagtcttagctattggcgggatgactatgttt
tctcgttttggtaatcagcgtgcagctgctcctactcaatctgctcccgccgccagtgct
aaaaatgccgcattgccggtgaaggttcagcaagttaccactagcacaactgaagaaagt
accaattttgtcggagccttagaagcacaacaaaaagtaacgctacaaccgcaaattcag
gggcgaattgaaaatattctcgtgtctagcgggcaacgggtgcagaagggaacaccgatc
gcatctttgagtttggatcaaactcaggcaaatgttgccagttccatcgccgcggccaat
gctgcccaagcagggttaaaaacagcgcaagcacaactacaacaagcccaggcacagcgt
actaaggtagccgcaaatcttcagcttcagcaaacccaattgaaccgtacccaacaatta
gtagctgaaggagcgttggcaacacagcagttagatattgccaggaataatgtgcaaagt
gcgatcgcggatttacaagctgcagataaggaggttgctgctgctaatgctggcattagg
caagctcaggcgaatatccgccaagcccaagcgggtacggcggcggcgcaagtgaatgtg
aatctcaaacgtgtagtatcaccgattaatggcatagtcggtgaatttcctgtaaaaatt
ggcgattatgtctctactggacaaacaatcaccaccattattcaaaatgatgccctggat
ttaaatctctctgtgccttccaatcgcttgaagcaactgcgagttggcttacctgtgcag
ttagtcgatccgacgacgcaacaagtcattggtacaggggcaattaactatatttctcct
acagttagttctaatcaacaatcgattttaagcaaggcacgttttaataattccccagga
agattgcgcgatgggcaatatgtgcaagcgcggattatttggaatcgccaaccaggggta
ttgattcccactgttgctatttctcggattggtggacaaagttttgtctttgtcacagaa
aacacaactgttaacggcaagccacagcaaattgtgcatcagcgtttagtgcgtcttggc
gatattcaaggaacgaattatcaagttcttgaaggactcaaaccaggcgaaaccattgtt
acctctggcattctcaaactcagagaaggcacacccattcaaccccaatcctaa
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