Nonomuraea coxensis: Nocox_01615
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Entry
Nocox_01615 CDS
T07466
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ncx
Nonomuraea coxensis
Pathway
ncx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Nocox_01615 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncx03400
]
Nocox_01615 (pdg)
Enzymes [BR:
ncx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Nocox_01615 (pdg)
DNA repair and recombination proteins [BR:
ncx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Nocox_01615 (pdg)
Prokaryotic type
Nocox_01615 (pdg)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QYC37956
LinkDB
All DBs
Position
341956..342678
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AA seq
240 aa
AA seq
DB search
MATKAAGRKPETQLALVRRARRMNRVLAETYPDAHCELDFRNPLELLVATILSAQCTDKR
VNMVTPVLFAKYPTVEDYAAADRSEMEDIIRSTGFFRAKTNSIIGMAQAVCERYGGEVPG
RLKDLVTLPGVGRKTANVVLGNAFDVPGLTVDTHFQRLVRRFGWTEETDPVKIEHVVGEL
LPRREWTIFSHRVIWHGRRICHARRPACGVCPLAALCPSYGTGPTSEAEARKLVRSGPFS
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaaagcggcggggcgcaagccggagacccagctcgcactcgtgcggcgggcg
cgcaggatgaaccgcgtcctggcggagacctacccggacgcccactgcgagctcgacttc
cgcaaccccctggagctgctggtcgccaccatcctgtccgcgcagtgcacggacaagcgg
gtcaacatggtgacccccgtcctcttcgcgaaatatcccacggtcgaggactacgccgcc
gccgaccggtcggagatggaggacatcatccgctcgaccggattcttccgcgccaagacc
aacagcatcatcggcatggcccaggccgtgtgcgaacgctacggcggcgaggtgcccggc
aggctcaaggacctggtgaccctgccgggcgtcggccgcaagaccgccaacgtggtgctc
ggcaacgccttcgacgtcccggggctcaccgtcgacacccacttccagcgcctggtgcgg
cggttcggctggaccgaggagaccgaccccgtcaagatcgagcacgtggtgggcgagctg
ctgccgcgccgcgagtggacgatcttctcgcaccgggtcatctggcacggccggcgcatc
tgccacgcccggcgccccgcctgcggcgtctgcccgctcgccgcgctctgcccgtcgtac
ggcacggggccgacgtccgaggccgaggcgcgcaagctcgtcaggtccggccccttctcc
tga
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