Nonomuraea coxensis: Nocox_06395
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Entry
Nocox_06395 CDS
T07466
Symbol
gdhB2
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
ncx
Nonomuraea coxensis
Pathway
ncx00220
Arginine biosynthesis
ncx00250
Alanine, aspartate and glutamate metabolism
ncx00430
Taurine and hypotaurine metabolism
ncx00910
Nitrogen metabolism
ncx01100
Metabolic pathways
ncx01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ncx00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
Nocox_06395 (gdhB2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Nocox_06395 (gdhB2)
00220 Arginine biosynthesis
Nocox_06395 (gdhB2)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
Nocox_06395 (gdhB2)
Enzymes [BR:
ncx01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
Nocox_06395 (gdhB2)
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Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_ACT3
GDH_HM1
GDH_HM2
ELFV_dehydrog
MerR
Acb2_Tad1_hairpin
Motif
Other DBs
NCBI-ProteinID:
QYC38906
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Position
1285981..1290855
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AA seq
1624 aa
AA seq
DB search
MPLDEAKDELLQRAAEHCVASSEHVITEEALSFLRLYYRHVAPEDLLDRNPVDVYGPAMS
QRRLAEQRPQGRAVIRAFTPTIEENGWDPGHSVVEVVTDDMPFLVDSVTMELDRHDFGIH
LLVHPQMRVRRDMTGRMLGRGQEDVTGQMLVESWIHIEIDRQADPAALKALENDLQRVLT
DVRHAVEDFRKMRALAVQVAEDLSMSPPPLEPAEVEDSIDLLRWFADGHFTFLGYREYRL
EDTDRGEALRALPGAALGILRDDRIGSESFSVLPPEVRAKAREKQLMIITKANSRATVHR
ATYLDYIGVKMFSPDGEVIGERRFLGLFTHVAYNESISRIPVLRRKLADVLERAGLAPDS
HDGKDLIEILESFPRDELFQTSLEQLLPIALGVLRLRERKQVKLFLRRDDYGRYISCLIY
LPRDRYTTKVRLKMQEVLLKALGGRSLDYSAMIGESSLARLHVVIRGERGKQLPPPRVDV
EELEARLAAITRSWEDDLAVALAEMTSEEEAPALTRRYAAAFPEGYKADFPPKVAVADLR
RLEELVAGGGGDEVGINLYEPYDAAEGERRLKIYKVGSPISLSQALPLIQRLGVEVVDER
PYEVDRDNDPATKNAWIYDFGLRYTPSAEVDRKDFKRLFQDGLRALWTGRVQADDFNALI
LRGGLTWEQVEVLRVYAKYLRQAGSTFSQPYMEKVLTGNVRLARLLVNLFEARLDPRRDE
DVRCDLVDALNEEILGALDEVASLDEDRILRAYLEMIQATLRTNYFQTVDGRRKTYISLK
FDPQAISVLPLPRPKFEIFVYSPRVEGVHLRFGKVARGGLRWSDRMEDFRTEILGLVKAQ
MVKNTVIVPTGSKGGFVVKRPPVGGTREEVMAEGIACYRTFISGLLDITDNLVDGKVVPP
RDVVRHDGDDTYLVVAADKGTATFSDIANAVAKEYGFWLGDAFASGGSIGYDHKAMGITA
RGAWESVKYHFRTTGVDTQTTDFTVVGIGDMSGDVFGNGMLLSQHIRLVAAFDHRHVFVD
PDPDAARSFAERRRLFELPRSSWEDYDPGLISAGGGVFSRTAKSVQITPQMREALGIPAG
VSSMAPNDLISAILKAPVDLLWNGGIGTYVKASSESHADVGDKANDALRVDAADLRCKVI
GEGGNLGLTQLARIEFARKGGLVNTDFIDNSAGVDTSDHEVNIKILLDQVVRDGELTDKQ
RNQVFTSMTDEVAQLVLRDNYAQNVVLDVARAQAVEMLHIHSRYLRRLEREGLVNRELEF
LPSDKTLAERRQARLGLTSPEFSVLLAYTKLVLDAEVLNSDLPDEPYLESWLVSYFPSAL
RERFRTYMDAHPLRREIITTCVVNDLVNSMGTTFMHRFGEETGASAPDIVRAWLVTRELF
DLPSFYRAVEALDNQVDTATQIAMLLEARKLIERGTRWLLANRRPPLDLAGSAGFFVKGV
NGLLAHIPKLLTGPDLAAYEERRDAFLARGVPQELAERVAGMVPAYSTLDLVEIASIGER
PVSEVAEVYFDLADRLQLARLRERVIALPRDNRWNSMARTALRDDLYAAHASLTRDVLAH
SEPGLAPEERLALWTEANSAAVARARQTLSEIWESDNFDLATLSVALRAVRTLVAATSLP
HAEA
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcgacgaggccaaggacgagctgctccagcgagcggccgagcactgcgtggcg
agcagcgaacacgtgatcaccgaggaggcgctgtccttcctgcggctctactaccgtcac
gtggcccccgaggacctgctggaccgcaaccccgtcgacgtctacggccccgcgatgtcg
cagcgccggctcgccgagcagcgtccccagggccgggccgtgatccgcgccttcaccccc
accatcgaggagaacgggtgggacccgggccactcggtggtcgaggtggtcaccgacgac
atgccgttcctggtcgactcggtgacgatggagctggaccggcacgacttcggcatccac
ctcctggtccacccgcagatgcgggtgcgcagggacatgacgggccgcatgctgggccgc
ggtcaggaggacgtcaccggccagatgctggtcgagtcctggatccacatcgagatcgac
cggcaggccgacccggcggcgctgaaggcgctggagaacgacctgcagcgggtgctcacc
gacgtgcgccacgccgtcgaggacttcaggaagatgcgggcgctcgccgtccaggtcgcc
gaggacctcagcatgagcccgccgccgctggagccggccgaggtcgaggacagcatcgac
ctgctgcgctggttcgccgacgggcacttcaccttcctcggctaccgcgagtaccggctg
gaggacaccgatcggggcgaggcgctgcgggccctgccgggcgcggcgctcggcatcctg
cgcgacgaccgcatcggctccgagagcttctccgtgctgccgcccgaggtgcgggccaag
gcgcgcgagaagcagctcatgatcatcaccaaggccaactcgcgggccaccgtccaccgg
gcgacctacctcgactacatcggggtcaagatgttctcgcccgacggcgaggtcatcggc
gagcggcgcttcctcgggctgttcacccacgtggcctacaacgagtccatctcccgcatc
cccgtgctgcgccgcaagctggccgacgtgctggagcgggccgggctcgcccccgacagc
cacgacggcaaggacctcatcgagatcctggagtcgttcccgcgtgacgagctgttccag
acctcgctggagcagttgctgccgatcgcgctcggcgtgctgcggctgcgcgagcgcaag
caggtcaagctgttcctgcgccgcgacgactacggccgctacatctcctgcctgatctac
ctgccgcgcgaccgctacaccaccaaggtccggctgaagatgcaggaggtgctgctcaag
gcgctgggcggccggtcgctggactacagcgcgatgatcggcgagtcgtcgctggcccgc
ctgcacgtcgtgatccggggcgagcggggcaagcagctcccgccgccgcgcgtggacgtg
gaggagctggaggcccgcctggccgccatcacccgctcctgggaggacgacctcgccgtc
gcgctggccgagatgacctccgaggaggaggcgccggcgctcacccgccgctacgccgcc
gcgttccccgagggctacaaggccgacttcccgcccaaggtggccgtggccgacctgcgc
cgcctggaggagctggtcgcgggcggcggcggcgacgaggtcgggatcaacctctacgag
ccgtacgacgcggccgagggggagcggcggctcaagatctacaaggtcggctcgcccatc
tcgctgtcccaggcgctgcccctcatccagcggctcggcgtcgaggtcgtggacgagcgg
ccctacgaggtcgaccgggacaacgacccggccaccaagaacgcctggatctacgacttc
ggcctgcgctacacgccgtccgccgaggtggacaggaaggacttcaagcgcctgttccag
gacggcctgcgggccctgtggaccgggcgggtgcaggccgacgacttcaacgcgctgatc
ctgcggggcgggctgacctgggagcaggtcgaggtgctgcgggtgtacgccaaatacctg
cggcaggcgggcagcacgttctcgcagccgtacatggagaaggtgctcaccggcaacgtg
cggctggcgcggctgctggtcaacctgttcgaggcgcggctcgacccgcggcgggacgag
gacgtgcggtgcgacctcgtggacgcgctgaacgaggagatcctgggcgcgctggacgag
gtggcctcgctggacgaggaccgcatcctgcgggcgtacctggagatgattcaggcgacc
ttgcgcaccaattacttccagacggtggatgggcgccgtaaaacgtacatatctctcaaa
ttcgacccgcaggccatcagcgtgctgccgttgccgcggccgaagttcgagatattcgtc
tactcgccgcgcgtcgaaggcgtgcacctccggttcgggaaggtggcgcgcggcggtctg
cggtggtcggaccggatggaggatttccggacggagatcctgggcctggtcaaggcgcaa
atggtgaaaaacaccgttattgtcccgactgggtctaaaggtggatttgtcgtcaagcgt
cctccggtgggcggcacccgcgaggaggtgatggccgaaggcatcgcctgctaccgcacg
ttcatctccggcctgctggacatcaccgacaacctcgtggacggaaaggtcgtgccgccg
cgcgacgtggtccggcacgacggcgacgacacctacctcgtcgtcgcggccgacaagggc
accgccaccttctccgacatcgccaacgcggtggccaaggagtacggcttctggctcggc
gacgccttcgcctccggcggctccatcggctacgaccacaaggccatgggcatcaccgcg
cgcggcgcctgggagtcggtcaagtaccacttccgcaccacgggcgtggacacccagacc
accgacttcaccgtggtcggcatcggcgacatgtcgggcgacgtgttcggcaacggcatg
ctgctgtcccagcacatccgcctcgtcgccgccttcgaccaccggcacgtcttcgtcgac
cccgaccccgacgccgcccgctccttcgccgagcggcggcgcctgttcgagctgccgcgc
agctcctgggaggactacgaccccgggctgatctccgcgggcggcggcgtcttctcccgc
accgccaagtccgtccagatcacaccgcagatgcgcgaggcgctcggcatcccggccggc
gtcagctcgatggcgcccaacgacctgatcagcgccatcctcaaggccccggtcgacctg
ctgtggaacggcggcatcggcacctacgtcaaggcgtcctccgagtcgcacgccgacgtc
ggcgacaaggccaacgacgcgctccgcgtggacgccgccgacctgcgctgcaaggtcatc
ggcgagggcggcaacctgggcctgacccagctcgcccggatcgagttcgcgcgcaagggc
gggctggtcaacaccgacttcatcgacaactcggccggggtcgacacctccgaccacgag
gtgaacatcaagatcctgctcgaccaggtcgtccgcgacggcgagctgaccgacaagcag
cgcaaccaggtcttcacctcgatgaccgacgaggtcgcccagctcgtgctgcgcgacaac
tacgcccagaacgtggtcctcgacgtcgcccgcgcccaggccgtcgagatgctgcacatc
cactcccgctacctgcggcggctggagcgcgaggggctggtcaaccgggagctggagttc
ctgccctcggacaagacgctggccgagcgccgccaggccaggctcgggctcacctcgccc
gagttctccgtgctgctcgcgtacaccaagctggtgctcgacgccgaggtgctgaactcc
gacctgcccgacgagccctacctggagtcgtggctggtctcgtacttcccttcggccctg
cgggagcggttccggacgtacatggacgcgcacccgctgcgccgcgagatcatcaccacc
tgcgtggtgaacgatctggtcaactccatgggcaccacgttcatgcaccgcttcggcgag
gagaccggcgcctccgcgcccgacatcgtgcgggcgtggctggtcacgcgcgagctgttc
gacctgccgagcttctaccgggcggtcgaggcgctcgacaaccaggtggacaccgccacc
cagatcgccatgctgctggaggcgcgcaagctgatcgagcgcggcacccgctggctgctg
gccaaccgccggccgccgctcgacctcgccgggtcggccggtttcttcgtcaagggcgtc
aacgggctgctcgcccacatccccaagctgctcaccggccccgacctggccgcctacgag
gagcgcagggacgccttcctcgctcgcggcgtgccccaggagctggccgagcgggtggcc
gggatggtgcccgcgtactccacgctcgacctggtcgagatcgcctcgatcggcgagcgg
ccggtcagcgaggtggccgaggtctacttcgacctggccgaccggctccagctcgcccgc
ctgcgggagcgcgtgatcgcgctgcccagggacaaccgctggaactccatggcccgtacg
gcgctgcgcgacgacctgtacgccgcgcacgcctccctcacccgggacgtgctggcccac
agcgagccgggactcgcgcccgaggagcggctggccctctggacggaggccaactcggcg
gccgtcgcgcgggccaggcagacgctgtcggagatctgggagagcgacaacttcgacctg
gccacgctgtcggtcgcgctgcgggccgtccgcaccctggtggccgccaccagcctcccg
cacgcggaggcgtag
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