Nitrospira defluvii: NIDE0244
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Entry
NIDE0244 CDS
T01281
Name
(GenBank) putative Radical-activating enzyme, radical SAM superfamily
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
nde
Nitrospira defluvii
Pathway
nde00790
Folate biosynthesis
nde01100
Metabolic pathways
Module
nde_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
NIDE0244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nde03016
]
NIDE0244
Enzymes [BR:
nde01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
NIDE0244
Transfer RNA biogenesis [BR:
nde03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
NIDE0244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
CBK40025
UniProt:
D8P9W6
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All DBs
Position
213310..213948
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AA seq
212 aa
AA seq
DB search
MVKVTEIFHSIQGESTYAGRPCVFVRLTGCPLRCTWCDTAYAFYGGRDLTIDDIVNQVRA
FSCDLVEVTGGEPLSQPASLPLLTRLCDEGFEVLVETSGAIETIGVDRRVHVILDVKCPG
SGMTDRMCWSNLDRLAPQDEVKFVIKDRVDYEWAREVLHRHELPGRCTVLMSPVFGEVEV
RYLAEWILADKLPVRFQLQMHKFIWAPDMRGV
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaggtgaccgaaatcttccacagcatccagggcgagtctacctatgccggccgc
ccctgtgtattcgtccggttgaccggttgtccgctccggtgcacctggtgcgacacggcc
tatgccttctacggcgggcgggatctgacgatcgacgacatcgtcaatcaggtccgcgcg
ttctcgtgcgatctcgtcgaagtgaccggaggagagccgctcagccagccggcgtctctt
ccattattgactcgcttgtgtgatgagggcttcgaggtgctcgtggaaaccagcggggcc
atcgaaaccatcggcgtggaccggcgggtgcatgtgattcttgacgtgaaatgtcccgga
agcgggatgaccgaccgcatgtgttggtcgaacctcgaccggcttgcgcctcaggatgaa
gtgaaatttgtgatcaaggatcgggtggactatgaatgggcgcgagaggtgctccatcgt
cacgagcttccggggcggtgcacggtgctcatgagtccggtgttcggcgaagtagaggtg
cggtatctggcggagtggatactggccgataagctgccggtgcgtttccagctccaaatg
cacaaattcatctgggcgcccgatatgcgtggtgtttga
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