Nitrospira defluvii: NIDE1687
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Entry
NIDE1687 CDS
T01281
Symbol
acrB2
Name
(GenBank) RND-type permease AcrB
KO
K18138
multidrug efflux pump
Organism
nde
Nitrospira defluvii
Pathway
nde01501
beta-Lactam resistance
nde01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NIDE1687 (acrB2)
01503 Cationic antimicrobial peptide (CAMP) resistance
NIDE1687 (acrB2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nde02000
]
NIDE1687 (acrB2)
01504 Antimicrobial resistance genes [BR:
nde01504
]
NIDE1687 (acrB2)
Transporters [BR:
nde02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NIDE1687 (acrB2)
Antimicrobial resistance genes [BR:
nde01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NIDE1687 (acrB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
CBK41421
UniProt:
D8PDW2
LinkDB
All DBs
Position
complement(1593057..1596326)
Genome browser
AA seq
1089 aa
AA seq
DB search
MLTRAALKNPYAVFAICMIALILGAVSYQKMRVDIFPEIKLPSILVTTFYRGLSPSEMEG
AITLKMEQRFVEASYVEHIESQSLSGMSYIKVFFQPDYGIDSAQSELTSLAYSIIRLLPP
GVYPPSVYKFGVSSLPVGYLSISSDTLGPKEIRDLAYFNVRQQIATIPGISFGPPLGGKV
RQITVFLDQQRLLARGVSPSEVVNALNAQSAIIPAGDIKIGDLDYYVYSNSLVDVVDKIN
DIPIKIVNGTPVLIRDIGTAADSAAVQTSIVRVNGREATYIPITRQEGANTLEVTDGIRA
KLSKLTEIPAGTTVKFLYDQSLYIRQAIANLQKEGLLGAGLAGLMIFIFLASVKAALVVG
LAIPLSLTAALVALYLTGQSVNLMTLGGLALVIGTLLDNNIVVQENLHRHLEMGKDGRSA
AEDSAMELTLPILVATICILIVYLPIMFFTGIVKYLFVPLAMTVAFAMLADYVVSMSVTP
VVLAWLYQAGHAKSSDHEASADEGWFRYVLAIYEPLLTAGVRFKPVVIGLATLALVATAV
FLLPRLHTEFFPKVDAGNFTMLVMAPEGSRIEKTTAIVGHIEQLVHDTIPKGDLEEVISN
TGLYFGDAARFAPNTGNHTAFVLVNLMTGHQGHTEDYIADLRKKFKASLPGVEIAFQTGG
IISDVLNFGLKAPIDIQVKGPSLEVIRPVAEQIQQRIAQVPNTVDVRIKQGKSYPELHID
VDRTKAAYYGINQNRVVVDVITGISSNLALSPNYWLDPKTANGYFLLAQYPEQSLTTTED
LLNIPIIGARTPLLPTASLTGGGMQGSTLALQNTPFAGRQMDMASGYYATGDDRRGPPVM
LRDVASLKFKTGPDSVDHYDLSRLINVLVTPVGNDLGHVAKDIEKALAGVPLPKDVTVQL
RGEVANMRGAIQNFALALPLAVVLIYLVMVALFRSFIDPLIILVAVPLGWIGTVLTLHLT
NTSVNVESMIGTLMMMGIVVSNSILLVDFANRMVRHGATAEHAVLEAGRRRIRPILMTAL
ATILGLLPLALGFGEGNETMVPLARAVVGGLAVSTIMTLLVVPIMHSLVLIRRERPPVSS
TAPATLEEI
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgcgcgccgccctcaagaacccctacgccgtcttcgcaatctgcatgatcgcg
ctgatcctgggcgccgtctcttatcagaagatgcgcgtggacatcttccccgagatcaag
ctgccgtcgattctcgtcacgaccttctatcgcgggttgagtcccagcgagatggaaggg
gccatcacgctcaagatggagcagcgcttcgtcgaagccagttacgtcgagcacatcgag
tcccagtcactctcgggcatgagttacatcaaggtcttctttcagccggactacggcatc
gattcggcccagtcggagctgaccagcctagcttacagcatcatccgcctgctgccgccc
ggcgtgtacccgccctccgtctataaattcggtgtgtcgagtctcccggtgggctatctc
tccatctccagcgacacgctcggccccaaggaaatccgcgacctggcctacttcaacgtg
cgccagcagatcgccaccatcccgggtatttccttcggtcctccattgggcggcaaggtc
cggcagatcaccgtgtttctcgaccagcaacgactgctcgcgcgcggcgtctcgccctcc
gaggtagtcaatgcgctgaacgcgcagagcgccatcattcccgctggcgacatcaagatc
ggggacctcgactactacgtctactccaacagcctcgtggacgtggtggacaagatcaac
gacattcccatcaagatcgtcaatggcacgccggtgttgatccgcgacatcggcaccgcc
gccgacagcgccgcggtgcaaacttcgatcgtgcgggtgaacggccgcgaagcaacctac
atcccgatcaccaggcaggaaggcgccaacacgctggaagtcaccgacggcattcgcgcg
aagctgtcgaagctcacggagattccagcgggcacgaccgtcaagtttctctacgaccag
tcgctctatatccgacaggccatcgcgaatctccaaaaagagggcctcctcggcgccgga
ctggccggtctcatgattttcatttttctggcgagtgtcaaagcggcgctcgtggtcgga
ctggccattcccctctcgctgaccgccgcactggtggcgctctacctgaccggccagagc
gtgaatttgatgacgctgggcggactggccctggtcatcggcaccctgctggacaacaac
atcgtggtgcaggagaacctgcatcggcatttggaaatggggaaggacgggcgatcagcg
gcagaggacagcgccatggagttgacgctgccgatcctggtggccacgatctgcatcctc
atcgtctacctgccgatcatgttttttaccggcatcgtgaagtatctcttcgtgccgctg
gcgatgaccgtcgccttcgccatgttggccgactatgtcgtctccatgtcggtgacgccg
gtggtgttggcctggctctaccaggcggggcatgccaagtcttccgaccatgaggcgtcg
gccgacgagggatggttccggtatgtgcttgccatctatgaaccgctgctcaccgccggt
gtgcgcttcaagcccgtcgtgatcggcctggccacgctcgccctggtcgcgaccgcagtc
tttctgctgccccgtctccacaccgagttcttccccaaagtggacgccggcaatttcacc
atgctggtgatggcaccggaaggatcacggatcgaaaagaccacggccatcgtgggtcac
atcgaacaactcgtgcacgatacgattcccaagggcgacctggaagaagtgatctcgaac
acgggtctttacttcggcgatgcggcgcgcttcgctccgaacaccggaaaccatacggcc
ttcgtgctggtgaatctgatgaccggacatcagggtcacacggaagactacattgcggac
cttcgcaagaagttcaaggcttcgctgcccggtgtagaaatcgcctttcaaaccggcgga
atcatcagcgatgtgttgaacttcggcctcaaggctccgatcgacatccaggtcaagggc
cccagcctagaggtcatccggccggtcgcagagcaaatccagcagcggatcgcgcaggta
cccaatacggtcgatgtgcggatcaagcagggcaagagttaccccgagctgcatatcgat
gtggatcgcaccaaagccgcgtactacggcatcaaccagaatcgcgtggtcgtcgatgtc
atcaccggtatcagctccaatctggccctctcccccaactactggctggatcccaagacc
gccaacggctatttcctgctggcacagtacccggagcaatcgctcaccacgacggaagat
ttgctgaacattcccatcatcggcgcacgcacgccgctgcttccgactgccagcctcacc
ggaggcggtatgcaaggctccacgctggcgctgcagaatacgccgtttgccgggcggcaa
atggacatggcgagcgggtattacgctacgggagacgaccgccgcggcccaccagtgatg
ctgcgggatgtggcatccctgaaattcaaaaccggcccggattcagtggaccactatgat
ctctcccgattgatcaacgtgttggtgacaccggtcggaaacgatctcggccatgtggcc
aaggacattgaaaaagccctggccggcgtgcccctgcccaaggacgtgacggtacaactg
cgtggcgaagtggccaatatgcgcggcgccatccagaacttcgcgctggccctccccctc
gccgtggtgctgatctacctggtgatggtcgcgctgttccggtcgttcattgatcccctc
attattctggtcgccgtaccgctgggctggatcggcaccgtactcacattgcatctcacc
aacacgtccgtgaacgtcgagtcgatgatcggcacgttgatgatgatgggcatcgtggtg
tcgaacagtattctgctggtcgactttgccaatcgtatggtccgccacggagccacggcc
gaacatgccgtgctcgaagcaggacggcgacgcattcgcccgatcctgatgacggccctt
gcgacgattctcggcctgctgccgctggccctcggcttcggcgagggcaatgaaacgatg
gtgcctctggcccgcgcggtggtcggcgggttggcggtcagcacgatcatgacgttgttg
gtggtccccatcatgcactccctggtgctgatccgccgggaacgtccccctgtgtcttcg
accgcgcccgcgactctggaggaaatttga
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