KEGG   Nitrospira defluvii: NIDE1868
Entry
NIDE1868          CDS       T01281                                 
Symbol
metH
Name
(GenBank) Methionine synthase
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
nde  Nitrospira defluvii
Pathway
nde00270  Cysteine and methionine metabolism
nde00450  Selenocompound metabolism
nde00670  One carbon pool by folate
nde01100  Metabolic pathways
nde01110  Biosynthesis of secondary metabolites
nde01230  Biosynthesis of amino acids
nde04980  Cobalamin transport and metabolism
nde04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:nde00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    NIDE1868 (metH)
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    NIDE1868 (metH)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    NIDE1868 (metH)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    NIDE1868 (metH)
   04980 Cobalamin transport and metabolism
    NIDE1868 (metH)
Enzymes [BR:nde01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     NIDE1868 (metH)
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding
Other DBs
NCBI-ProteinID: CBK41595
UniProt: D8PED6
LinkDB
Position
1756323..1760006
AA seq 1227 aa
MPVHEVRDLLRERILILDGAMGTMIQRYKLDEAAFRGERFRNWSKDLKGHNDLLNVTRPD
VIEAIHRQYLEAGADIIETNTFNSQSVSLADYGMDDLGYELSKAGAECAKRAVAQVVAAH
PARRCFVAGAIGPTTKTSSVSTDSNDAAARGTTYPELVRAYGEQVRGLLDGGVDLLLVET
IFDTLNAKAAFFAIQQLFAEGARQVPIMASVTFIQAGSNRGFSGQTVEGFWNSISHVPLL
SVGMNCALGPKEMRPLIEELSQIAPIFVSSHPNAGLPNPLLPTGFPETPDSLAPQLREWA
QNGWLNIVGGCCGTTPDHIRSIATAVNGVTPRQPSKVEPYLRLSGLEALTVRPESNFVNV
GERTNITGSPAFSKLILTGDYDKALTVARQQVEGGAQVIDINMDEGMLDSKAAMQKFLRL
LAAESDIARVPIMVDSSKWEVIEEGLRNMQGKGIVNSISLKEGEAKFLEQARLIRRYGAA
IVVMAFDERGQADSVARRIEICERSYRLLTEQVGVPPQDIIFDPNILTVATGLEEHNNYA
VDFIEATRWIKQHLPLAKVSGGVSNISFSFRGNNVVREAMHAAFLYHAIQAGLDMGIVNA
GQLAVYEEIPKDLLLLVEDVLLNRRPDATERLVTFADTVKQKGKAAVKDDEWRTRPVEER
LAHALVKGLTDYIDQDVEEARQKSVRPLDVIEGPLMAGMNIVGDLFGSGKMFLPQVVKSA
RVMKKAVAYLMPFMEAEKLRLGTSRANGKVLLATVKGDVHDIGKNIVGVVLGCNNYEVID
LGVMVSCETILATAREQQVDMVGLSGLITPSLDEMVHVAKEMTRQGFTVPLLIGGATTSK
AHTAVKIAPSYGHATVHVLDASRAVGVVGSLINDEQRESFSAGVRADYDRIRQAHQDRGQ
KVLRSLDEARQHKLPTDWAAADIPVPSFTGVRQIDRMPLRELVPYIDWSPFFHTWELRGR
YPSILDDATVGPKAKELLADAQALLEEIIRGELLTARGVYGFFPANSAGDDIHLYRDQDR
REPLATFHTLRQQMEKPADQFNLALADYVASKESGRADYVGAFVVTAGIGVPALCAKYEK
DHDDYNSIMVKALADRLAEAFAEWLHQQVRLEWGYGKTENLTNEDMIRERYRGIRPAPGY
PACPDHTEKRTLFDLLNAEAQAGVTLTESYAMLPAAAVSGLYFAHPEAKYFAVGKINRDQ
VEDYATRKKLPVSEVERWLAPNLNYDA
NT seq 3684 nt   +upstreamnt  +downstreamnt
atgccggtacatgaagttcgcgacctcttgagagagcgcatcctgatcctggatggtgcc
atggggaccatgatccagcggtacaagctggacgaagccgcgtttcgcggggagcgtttt
cgaaactggagcaaagatctcaagggacacaatgatcttctgaatgtcacccggccggat
gtcattgaggcgattcaccggcagtacctagaagccggcgcggatatcatcgagaccaat
acgtttaactcacagtccgtgtcactggccgattacggcatggacgacctgggatatgag
ctgtccaaagccggcgccgaatgcgcgaagcgggcagtggcacaggttgtcgcggcgcac
cccgcgcggcgctgtttcgtagcgggcgcaatcggccctaccaccaagacctcctcggtc
tcgaccgattccaacgatgcggcggcgcgtggcacgacctatcctgaactggtgcgagcc
tacggggagcaggtgcgcggcctgttggacggcggcgtcgatctgctcctggtcgagacg
attttcgatacgctcaacgccaaggcggcctttttcgcgatccagcagctgtttgcagaa
ggggcgcggcaggtgccgatcatggcctcggtcaccttcattcaggccgggagtaaccgc
ggcttttcaggtcagacggtggaagggttctggaattcgatctcgcatgtgccgttgctc
agcgtgggcatgaactgcgcattggggccgaaagaaatgcggcccctgatcgaagagctc
tcgcagatcgcgccgatttttgtgagcagccatccgaatgccggattgcccaatcccttg
ctgccgaccggtttcccggaaacgccggactcactggcgccgcagttacgcgagtgggcg
cagaacggctggctgaatatcgtcggcggctgctgcgggacgacgcccgaccatatccgt
tcgatcgcaacggccgtgaacggtgtgacgccacggcagccctccaaggtcgagccctac
ttgcggctgagcggcctggaggccttgacggtgcggcctgagtcgaatttcgttaatgtc
ggggagcgtaccaacatcaccggctcaccggccttttccaagctgattctgaccggcgat
tatgacaaggccttgactgtggcgcggcaacaggtcgagggcggggcgcaggtcatcgac
atcaacatggacgaaggcatgctggattccaaagcggccatgcagaagtttctgcggctg
ttggcggcggaatcggacatcgcccgggtgccgatcatggtggatagttccaagtgggaa
gtcatcgaagagggccttcgcaacatgcagggaaagggcatcgtcaattccatcagtctg
aaggaaggcgaggccaagtttctcgaacaggcgcggctcatccgtcggtacggcgcggcg
atcgtggtcatggcattcgatgaacgggggcaggccgactcggtcgcgcgacggatcgag
atttgtgagcgctcctatcgcctgttgacggaacaggtcggggtgccgccgcaggatatt
attttcgaccccaatattcttacggtcgcgaccggtcttgaagaacacaataactacgcg
gtcgattttatcgaagccacccgatggatcaagcagcacttgccgctggcgaaagtcagc
ggcggcgtcagcaatatttcgttctcgttccgcggtaacaacgtcgtccgcgaggccatg
cacgccgcgtttctctaccatgccatccaggccggcctcgacatgggcatcgtcaatgcg
ggacagctggccgtctatgaggaaattcccaaggacctgctgctgttggtcgaagacgtg
ttgttgaatcgccggccggatgccacggagcggttggtgacgtttgccgacacggtcaag
cagaagggcaaggcggcggtgaaggacgacgagtggcggaccaggccggtcgaggagcgc
ttggcccatgcgctggtgaagggactgaccgactacatcgatcaggacgtggaggaagca
cgacagaaatccgtccggccgctcgacgtgatcgagggaccgttgatggcggggatgaac
atcgtcggcgatctgttcggatcggggaaaatgtttctgccgcaagtggtgaagagcgcc
cgggtaatgaagaaggccgtggcctatctcatgccgtttatggaagccgaaaaattacgg
ttgggcacgtcccgggcgaacggcaaggtgttgcttgcgacggtgaagggcgatgtgcac
gatatcgggaagaacatcgtgggtgtggtgttgggctgcaacaactatgaggtgatcgat
cttggggtgatggtctcctgcgaaacgattctggcgacggcccgtgagcagcaggtggat
atggtcggcctgagcgggttgatcactccgtcgttggatgaaatggtgcatgtggccaag
gagatgactcgacaagggttcacggtgccgttgctcatcggcggcgccaccaccagcaag
gcccacacggccgtgaaaattgccccttcgtacggccatgcgacggtgcatgtgcttgac
gcctcccgtgccgtcggtgtcgtggggagtttgatcaacgacgagcagcgggaaagtttc
tctgccggcgtccgcgccgactatgaccgtatccggcaggcgcatcaggatcgtgggcag
aaagtcctccgtagtctggacgaggcgcgacaacacaaattgccgaccgattgggctgcg
gccgatatccccgtgccgtcatttaccggcgtgcgtcagatcgatcgcatgcccttgcgc
gagctggtgccctacatcgattggtcgccgttttttcatacgtgggaattgcgcggccgg
tatccatcgatactggacgacgccacggtgggaccgaaggccaaggaacttctcgccgat
gcgcaggctttgctggaggagatcatccggggtgaattgttgaccgctcgcggagtctac
gggttcttccccgccaatagcgcgggcgacgacattcatctctaccgggatcaggatcga
cgtgagccgctggccaccttccacacgctccggcaacagatggaaaagccggccgaccag
ttcaacctggcgctcgcggattatgtggcctccaaggagtccggacgagccgactacgtg
ggggcattcgtggtcacggccggcatcggcgtgccggcgctctgcgcgaagtatgagaag
gatcatgacgactacaattccatcatggtcaaggccttggcggatcggctggcggaggcc
tttgccgaatggctgcaccagcaggtgcggctggaatggggatatgggaagacggagaac
ctcacgaacgaagacatgattcgcgagcggtatcgggggatccggccggctcccggttat
ccggcctgtccggatcacacggaaaagcggacgctcttcgatttattgaatgccgaggct
caagcgggggtgacgctgaccgaatcctacgccatgctgccggcggctgcggtcagcggc
ttgtatttcgcgcatccggaggccaagtattttgccgtgggcaagatcaatcgcgatcaa
gtggaggattacgcgacccgcaagaaactaccggtcagcgaagtagagcggtggctggct
cccaatctgaactacgatgcgtaa

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