Nitrospira defluvii: NIDE2163
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Entry
NIDE2163 CDS
T01281
Name
(GenBank) putative Multidrug efflux transporter
KO
K18138
multidrug efflux pump
Organism
nde
Nitrospira defluvii
Pathway
nde01501
beta-Lactam resistance
nde01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NIDE2163
01503 Cationic antimicrobial peptide (CAMP) resistance
NIDE2163
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nde02000
]
NIDE2163
01504 Antimicrobial resistance genes [BR:
nde01504
]
NIDE2163
Transporters [BR:
nde02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NIDE2163
Antimicrobial resistance genes [BR:
nde01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NIDE2163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
CBK41883
UniProt:
D8PF74
LinkDB
All DBs
Position
complement(2103957..2107073)
Genome browser
AA seq
1038 aa
AA seq
DB search
MRLSALSIERPVLAAVATLLLMLFGLLSYSRLPVREYPDTTFPIVSVMTVYPSADAQLVE
TDITSVLEDALSGVEGLRTLRSTSREGLSTIGLEFSLTRNLDAAANDVRDRVTRVQHLLP
QGIESPLVMKEDSDADGIMWLALISDRHTELEMTDFAERQLKDRLAPLPGVSSVMLDGGR
RYAMRIWLDPDRLASRLLTVQDVEDALRTQNVSMPTGRIESTQREFSVRMGGGLEKPPQF
NQLILAYRDGYPVRLQDVGAAEIGPEDDRKLVRVNGKPAIGLGIMKQSKANTLEAARGVK
RTLPAMEALLPEGMQLVTAFDSSIYIERSLHEVYTSVGLSLILVVLVVFLFLRSARATLI
PAVAIPGSILGTFVIMQMTGSSINTITLLGFVLAIGLVVDDAIVVVENVYRRIEQGLSPT
QAAVEGSREIGFAVVSTTLTLAAVFFPIIFLPGIVGRLFAELGIAVAGSVLLSGFIALTL
TPAMCARLLGKTVGTASPPRGSALDASAWLRWMTHRYRLALEIALKRPSTILSGAALSLI
VSAVLMLGLPSELAPLEDTGWFAVHVSAPEGSTLDYTDRYARDTEETTARIPEMDSYYTV
VARGWRPTLVNRAVTWVTLKDWSDRNRVQQKIVDDVQPALSAIPGATVFAINPPPFNQED
SKTPVQLVIRGPSYDVLDNIVRQVRHDLTGNQLVVNVESDLDLNKPELRVDINRDKAADL
GIPVETIGRTLEVFLGGRKASMFMREGKEYPVIMQTRPHQRGTRSDIEQLQVRGTQGELI
PLSNLVTVRETVAPKQLNHYEKLRAVTISAGVGADSTLSRSIESLEQTVRKHLPPGATIS
YAGESKEFLESSGNLHMTFLLALLVVYLILAAQFESFRHPITVLLSVPPALAGALLALLL
FRGTLNIYSEIGLMILIGLVTKNAILIVEFANQLCQGGTPPRAAIVEASVLRLRPIVMTT
LSTILAALPLALATGAGAAGRWHIGLVVICGLVLSTLLTLFLVPVVYLLFAGTAPVRQSA
AVPEPFPEVLPRHSPSQG
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgagactctccgccctctccatcgagcgacctgtcctcgccgccgtcgcgacgctcctg
ctcatgctgttcggactgctctcctattcccgcttgccggtccgcgaatatcccgacacc
accttccccatcgtctcggtcatgaccgtgtatcccagcgcggacgcccaattggtggaa
acggatattacttcggtgctggaagatgcgctgagcggcgtcgagggactccggacgttg
cgttcgacgagtcgcgagggactgtccacgatcggcctcgaattctccctgacgcgtaac
ctggacgcggccgccaacgacgtacgcgaccgcgtgacgagagtgcaacacctgcttccg
caaggcatcgaatcgcccctggtgatgaaggaggacagcgacgccgacggtatcatgtgg
ctggcactgatcagcgaccgccataccgaactggaaatgacggactttgccgaacggcag
ctgaaggatcgactggcacccctgcccggcgtctccagcgtcatgctcgacggaggacgg
cggtatgcgatgcgcatctggctggatcccgaccggctcgcgtcccgccttctcaccgtg
caggacgtcgaagacgcgctccggacacaaaacgtctccatgcccaccggccggatcgaa
agcacccagcgcgagttcagtgtgcgcatgggcggaggcctggagaaaccgccgcagttc
aaccaactgattctggcctatcgggacggttatccggtccggctgcaggacgtgggcgcc
gccgagatcggtccggaagacgatcgaaaactcgtgcgcgtgaacggcaaacccgccatc
ggcctcggcatcatgaaacagtccaaggccaataccctcgaagcagcgcgcggcgtcaaa
cgcaccctccctgcgatggaagcgttgctgccggaagggatgcagcttgtcacggcattc
gacagctcgatttatatcgaacggtcgttacacgaggtctacacctccgtcggactgtcg
ttgatcctggtcgtgttggtggtgttcctcttcctgcgcagcgcacgagctacgctcatt
cccgccgtcgccattccaggctcgatcctgggtacgttcgtcatcatgcagatgaccggc
agttcgatcaacacgatcaccctcttgggattcgtgctggccatcggattggtggtagac
gacgccatcgtcgtggtggaaaacgtctaccgccgcatcgaacaggggttgagcccgacg
caggcggcggttgagggcagtcgggagatcgggtttgccgtagtctcaacaaccctgaca
ctcgcagcggtcttctttccgatcatctttctgcccggtatcgtcggccgtctgtttgcc
gaactgggtatcgctgtcgccggctcagtgctcctgtccgggtttatcgcgctcaccctc
accccggccatgtgtgcgcgtttgctgggcaagaccgtcggaaccgcatcgccgccgcga
ggctccgcgctggacgcctccgcctggctccgctggatgacccatcggtatcgtctcgcc
ctggagatcgcgttaaaacggccctcgaccatcttgagcggggcggccctgtcgctgatc
gtcagcgcagtcctcatgctgggacttccgagcgaactggctccccttgaggataccggc
tggttcgccgtccatgtcagcgcgccggaaggatccacactcgactacaccgaccgatac
gccagggacaccgaggagaccaccgcacggatccccgaaatggattcctactatacggtg
gtcgcgcgaggctggaggccaaccctggtcaaccgggccgtgacctgggtgacgctgaag
gattggtccgatcgcaaccgcgtacagcagaagatcgtcgatgacgtgcaacctgccctc
tccgccatccccggcgccacggtctttgccatcaatccacccccgttcaaccaggaggac
agcaagacaccggtgcaattggtgatccgcggtccttcgtacgacgtgttggacaacatc
gtgaggcaggtccgtcacgacctcaccggaaaccagctggtggtcaatgtcgagagcgat
ttggatctgaacaaaccggagctccgggtggatatcaaccgcgacaaggccgcggacctt
ggcattccggttgagacgatcggcaggacgctggaagtctttctaggggggagaaaagcc
tccatgttcatgcgcgaaggcaaagagtatcccgtcatcatgcaaacgcgtccccaccaa
cgcggcaccagatccgacatcgaacagctgcaggtgcggggcacgcagggggagttgatt
cccctgagcaacctcgtgacggtgcgggaaaccgtggccccgaaacagctgaaccattac
gagaaactgagggccgtcacgatcagtgcgggagtgggggcggattcgacgctcagccgc
tccatcgaatcgctggaacagacggtacgcaaacacctacctcccggcgcgaccatcagt
tatgcgggagaatcgaaagaatttctggagtcgtcgggcaacctgcatatgacgttttta
ctggcactgctcgtcgtctacctcatcctggccgcgcagttcgaaagcttccgccacccg
atcaccgttctgctctcggttcccccggcgctggccggcgcgctcttggcgctgctgctg
ttccgtggcaccttgaatatctacagcgagatcgggctgatgattctgatcgggctcgtc
acgaaaaacgccatcctcatcgtggagtttgccaaccagctgtgccagggcggcacacct
ccgcgcgctgccatcgtcgaggcctccgtgttacgcctgcggcctatcgttatgaccaca
ctgtccaccattctggccgccctgccgttggcgctggcgacaggggccggcgcagccgga
cgctggcacatcggtctggtcgtgatctgcgggctcgtcctctcaacgctcctcacgctc
ttcctggtgccggtggtctacctcctttttgccgggactgctccagtccgacagtccgca
gcggtgcccgagccattcccggaagtcctgccgcgtcactctccttcacaaggctga
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