Nocardioides dokdonensis: I601_3332
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Entry
I601_3332 CDS
T04431
Symbol
metH
Name
(GenBank) Methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk00270
Cysteine and methionine metabolism
ndk00450
Selenocompound metabolism
ndk00670
One carbon pool by folate
ndk01100
Metabolic pathways
ndk01110
Biosynthesis of secondary metabolites
ndk01230
Biosynthesis of amino acids
ndk04980
Cobalamin transport and metabolism
ndk04981
Folate transport and metabolism
Module
ndk_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
I601_3332 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
I601_3332 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
I601_3332 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
I601_3332 (metH)
04980 Cobalamin transport and metabolism
I601_3332 (metH)
Enzymes [BR:
ndk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
I601_3332 (metH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
KH_GLD-3_3rd
Motif
Other DBs
NCBI-ProteinID:
ANH39739
UniProt:
A0A1A9GN62
LinkDB
All DBs
Position
complement(3492075..3495839)
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AA seq
1254 aa
AA seq
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MSQASTETPMEPVGPAEWRPDATDELRAALVERILVIDGAMGTAIQRDRPDEAGYRGERF
ADWPSDLIGNNDLLTLTQPDIIESIHREYLESGADLIETNTFNANSISLADYGLEALAYE
LNLEAARMARRAADAVATPERPRYVAGALGPTTRTASISPDVNDPAARNVTFDALVAAYR
TAARGLVDGGSDLLVIETIFDTLNAKAAIFAVESLFEDLGRRWPLIVSGTITDASGRTLS
GQTTEAFWNSVRHARPLAIGLNCALGAREMRPYIAELSRVADTFVSCYPNAGLPNAFGEY
DEAAAETAAVVHEFAQAGFVNLVGGCCGTTPAHVSAIAAAVRQERPRVPVELPSAMRLSG
LEPFALDADSLFVNVGERTNITGSARFRKLIKDGDYDTALSVAAQQVESGAQVLDVNMDE
GMIDGVAAMDRFTKLVASEPDISRVPLMVDSSKFEVIEAGLKNVQGKPIVNSISLKEGEE
AFIAHARLCRKYGAAAVVMAFDEDGQADNLQRRQSICERAYRILVDVVDFPAEDIIFDPN
VFAVATGIEEHASYGLDFIEAARWIKANLPGAKVSGGISNVSFSFRGNNPVREAIHAVFL
FHAIKAGLDMGIVNAGALVVYDQVEPELRERIEDVVLNRRPDAAERLLEIAEEHNRAGQP
VEATTEEWRGLPVSERITHALVKGIDTYAEADAEELRLEIAARGGRPIEVIEGPLMAGMD
VVGDLFGAGKMFLPQVVKSARVMKKAVAHLIPFIEQEKIDNPEYATAKETNGTIVMATVK
GDVHDIGKNIVGVVLQCNNFEVIDLGVMVPAQKILDTAREVGADIIGLSGLITPSLDEMV
TVATEMQRLGMDLPLLIGGATTSRAHTAVKVDPRYDGPVVWVKDASRSVPTAAALLHAER
RTTLMADVKADYDSLRERHSHKTERPKLSYEQACANATPIDWSDYRPPAPNSPGIHVLDD
YDLAELRDYIDWQPFFNAWEMKGRFPDILNNPASGETARKLYDDAQEMLDRVIAEKWITA
RGVFGFFPAAGDGDDTILYTDDTRNDVLTRLHHLRQQGQHREGIPNRSLGDFVAPLGTGL
PDHVGGFAVTAGIGLPDRITAFQADNDDYSAILLESLADRLAEAFAERLHERVRTEFWGH
QPEEQLSNEELIAERYEGIRPAPGYPACPDHTEKSTLWELLDVEASTGIELTESMAMWPG
ASVSGWYLSHPQSQYFVVGRIARDQVEAYAERKGWSLAEAERWLSPNLGYDPED
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
gtgagccaggccagcaccgagaccccgatggagcccgtgggcccggccgagtggcgcccc
gacgccaccgacgagctgcgcgccgccctggtcgagcggatcctcgtcatcgacggcgcc
atgggcaccgccatccagcgcgaccggcccgacgaggccggctaccgcggggagcgcttc
gcggactggcccagcgacctgatcggcaacaacgacctcctcaccctcacgcagcccgac
atcatcgagtcgatccaccgcgaatacctcgagtccggtgccgacctcatcgagaccaac
accttcaacgccaactcgatctcactggccgactacggcttggaggcgctcgcctacgag
ctgaacctcgaggccgcccggatggcccgccgtgccgccgacgccgtggccacccccgag
cggccccgctacgtcgccggtgccctgggtccgaccacccgcaccgcctcgatctcaccc
gacgtcaacgaccccgcggcccgcaacgtcaccttcgacgccctggtggcggcgtaccgc
accgctgcccggggactggtcgacggtggcagcgacctcctcgtcatcgagacgatcttc
gacaccctcaacgccaaggccgcgatcttcgcggtggagtcgctcttcgaggacctgggc
cgccggtggccgctgatcgtctcgggcaccatcaccgacgcgtccgggcgcaccctgtcg
ggccagaccaccgaggcgttctggaactccgtgcggcacgcccgaccgctggccatcggc
ctcaactgtgcgctcggggcccgcgagatgcgcccctacatcgccgagctgtcccgggtg
gccgacaccttcgtctcctgctaccccaacgccggcctgcccaacgccttcggcgagtac
gacgaggccgcggccgagaccgccgcggtggtgcacgagttcgcgcaggcgggcttcgtc
aacctggtcggcggctgctgcggcaccaccccggcccacgtcagcgcgatcgccgcggcg
gtccggcaggagcggccccgggtgcccgtggagctgcccagcgccatgcgtctctcgggt
ctcgagccgttcgccctcgacgccgacagcctcttcgtcaacgtcggggagcgcaccaac
atcaccggctccgcccgcttccgcaagctgatcaaggacggcgactacgacaccgccctg
agcgtggccgcccagcaggtggagagcggcgctcaggtcctcgacgtcaacatggacgag
ggcatgatcgacggggtcgcggccatggaccgcttcaccaagctcgtggccagcgagccc
gacatcagccgggtcccgctgatggtcgactcctcgaagttcgaggtgatcgaggccggg
ctcaagaacgtccagggcaagccgatcgtgaactcgatctcgctgaaggagggcgaggag
gcgttcatcgcccacgcccgactgtgccgcaagtacggcgccgcggcggtggtgatggcc
ttcgacgaggacggccaggccgacaacctgcagcgccggcagtcgatctgcgagcgggcc
taccggatcctcgtcgacgtggtcgacttcccggccgaggacatcatcttcgaccccaac
gtcttcgccgtggcgaccggcatcgaggagcacgcctcctacggcctcgacttcatcgag
gccgcccgctggatcaaggcgaacctgccgggcgccaaggtctccggcggcatctccaac
gtgagcttctccttccgcgggaacaaccccgtgcgcgaggcgatccacgcggtcttcctg
ttccacgccatcaaggcggggctcgacatgggcatcgtcaacgccggtgccctggtggtc
tacgaccaggtggagcccgagctgcgcgagcgcatcgaggacgtggtgctgaaccggcgt
cccgacgccgccgagcgcctcctcgagatcgccgaggagcacaaccgtgccggtcagccg
gtcgaggccaccaccgaggagtggcgcggcctgccggtctcggagcggatcacgcacgcg
ctcgtcaagggcatcgacacctacgccgaggccgacgccgaggagctgcggctcgagatc
gccgcgcgcggcggacgaccgatcgaggtcatcgagggtccgctgatggccggcatggac
gtggtgggcgacctgttcggcgccggcaagatgttcctgccccaggtggtgaagtcggcg
cgggtgatgaagaaggccgtcgcgcacctgatcccgttcatcgagcaggagaagatcgac
aaccccgagtacgccaccgcgaaggagaccaacggcaccatcgtgatggcgacggtcaag
ggcgacgtgcacgacatcggcaagaacatcgtcggggtggtcctgcagtgcaacaacttc
gaggtcatcgacctgggggtgatggtgccggcgcagaagatcctcgacaccgcccgcgag
gtcggcgccgacatcatcggcctgtctggtctgatcaccccctctctggacgagatggtc
acggtggccaccgagatgcagcgcctggggatggaccttccgctgctgatcggcggcgcg
accacctcacgcgcgcacaccgcggtcaaggtcgacccgcgctacgacgggccggtggtc
tgggtcaaggacgcctcccgctcggtgccgaccgccgccgcgctgttgcacgccgagcgg
cgtacgacgctgatggccgacgtcaaggccgactacgactccctgcgcgagcgccactcg
cacaagaccgagcgccccaagctcagctacgagcaggcctgtgccaacgccacgccgatc
gactggagcgactaccggcccccggccccgaacagtcccgggatccacgtcctcgacgac
tacgacctcgctgagctgcgcgactacatcgactggcagccgttcttcaacgcctgggag
atgaaggggcgcttccccgacatcctcaacaacccggcctcgggggagaccgcgcgcaag
ctctacgacgacgcccaggagatgctggaccgggtgatcgccgagaagtggatcaccgcg
cgcggtgtcttcggcttcttccccgcggccggcgacggggacgacacgatcctctacacc
gacgacacccgcaacgacgtgctgaccaggctgcaccacctgcgccagcagggtcagcac
cgcgaggggatcccgaaccgctccctgggcgacttcgtcgcgccgctcgggaccgggctg
cccgaccacgtcggtggcttcgcggtgacggccgggatcgggctgccggaccgcatcacg
gccttccaggccgacaacgacgactacagcgccatcctgctggagtcgttggccgaccgg
ttggccgaggcgttcgccgagcggctgcacgagcgggtgcgcaccgagttctggggccac
cagcccgaggagcagctcagcaacgaggagctgatcgccgagcgctacgagggcatccgg
cccgcgcccggctacccggcctgccccgaccacaccgagaagtcgacgctgtgggagctg
ctcgacgtggaggcgagcaccgggatcgagctgaccgagtcgatggcgatgtggcccggc
gcctcggtgtcggggtggtacctgagccacccgcagtcgcagtacttcgtggtcggccgg
atcgcccgcgaccaggtcgaggcgtacgccgagcgcaagggctggagcctggccgaggcc
gagcgctggctctcgccgaacctcggctacgacccggaggactga
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