Novosphingobium decolorationis: HT578_12545
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Entry
HT578_12545 CDS
T07993
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr01501
beta-Lactam resistance
ndr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HT578_12545
01503 Cationic antimicrobial peptide (CAMP) resistance
HT578_12545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ndr03036
]
HT578_12545
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ndr02000
]
HT578_12545
01504 Antimicrobial resistance genes [BR:
ndr01504
]
HT578_12545
Chromosome and associated proteins [BR:
ndr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HT578_12545
Transporters [BR:
ndr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HT578_12545
Antimicrobial resistance genes [BR:
ndr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HT578_12545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Peptidase_M23
RnfC_N
CyanoTRADDas_TM
Motif
Other DBs
NCBI-ProteinID:
QVM84408
LinkDB
All DBs
Position
complement(2718708..2719937)
Genome browser
AA seq
409 aa
AA seq
DB search
MNYTSKLDKDRAEVVSKEDLGAQTGADGAFEAHEAQTQGPEKGSSRLIWLGVAGAFVLIV
GIWFYLHSGSETGPVEAAQVPVVTVVKPGRSTVVGTITATGSLAARRAMPIGSVGEGGQV
RSVLVEPGDWVKAGQVLAVVDSSVQVQQQASQAAQIKAAQADARLAQSNLDRALQLVDRG
FISKADVDRLTATRDAALAQVELARASLRQLQAQAARLNIVAPAAGLVLERNVEPGQVVG
GGSSVLFRLAKGGEMELLANLSEDDLARVRVGAQAEVTPVGSERAFTGQVWQVSPIIDPT
SRQGTARIALAYDRALRPGGFASATLTSGTVVAPMLPESAIQSDAEGSFVYVVGKDNKVA
RRGVETGLVTADGIVISKGLAGTETVVLRAGGFLNPEDTVEPRMAKTAD
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaattacacgagcaagttggacaaggatcgcgccgaagtcgtgagcaaggaggacctg
ggcgcacagacgggcgcggacggggctttcgaggcgcacgaggcgcagacgcaagggccc
gaaaaaggctcctcgcggctgatctggcttggcgttgccggggctttcgtgctcatcgtg
ggaatctggttctacctccacagcggttcggaaaccggcccggtcgaggcggcacaggtg
ccggtcgtgaccgtcgtcaagccgggccgctcgaccgtcgtgggcacgatcaccgccacc
ggatcgctcgccgcgcgccgcgccatgccgatcggttcggtgggtgaaggcgggcaggtg
cgcagcgtcctcgtcgaaccgggcgactgggtgaaggccggccaggtgctcgccgtcgtc
gacagttcggtgcaggtccagcagcaggccagccaggccgcgcagatcaaggccgcgcag
gccgacgcgcggctcgcccagtccaatctcgaccgcgcgctccagctggtcgatcgcggc
ttcatctccaaggccgacgtcgaccgcctgaccgccacgcgcgatgcggcactggcccag
gtcgaactggcccgcgcttcgctgcgccagcttcaggcccaggccgcgcgcctcaacatc
gtcgcgcccgccgccgggctcgtgcttgaacgcaatgtcgagccgggccaggtcgtgggc
ggcggctcgagcgtactgttccgccttgccaagggcggcgagatggaactgctcgccaat
ctcagcgaggacgacctggcgcgcgtgcgcgtcggtgcgcaggccgaggtgactccggtc
ggctcggagcgcgccttcaccgggcaggtctggcaggtctcgccgatcatcgacccgacc
tcgcgccagggcaccgcgcgcatcgcgctggcctatgaccgtgcgctgcgtccggggggc
tttgccagcgccacgctgaccagcggcaccgtggtggcgccgatgcttccggaatcggcg
atccagagcgatgccgagggcagttttgtctatgtcgtgggcaaggacaacaaggtggcg
cggcgcggggtcgaaaccgggctcgttaccgccgatggcatcgtcatctccaagggcctt
gccggcaccgagacggtcgtcctgcgcgccggtggcttcctcaatcccgaggacaccgtc
gagccgcgcatggccaagaccgcggactga
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