Novosphingobium decolorationis: HT578_13460
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Entry
HT578_13460 CDS
T07993
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr01501
beta-Lactam resistance
ndr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HT578_13460
01503 Cationic antimicrobial peptide (CAMP) resistance
HT578_13460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ndr03036
]
HT578_13460
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ndr02000
]
HT578_13460
01504 Antimicrobial resistance genes [BR:
ndr01504
]
HT578_13460
Chromosome and associated proteins [BR:
ndr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HT578_13460
Transporters [BR:
ndr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HT578_13460
Antimicrobial resistance genes [BR:
ndr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HT578_13460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
TPR_MLP1_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
QVM84558
LinkDB
All DBs
Position
2891625..2892794
Genome browser
AA seq
389 aa
AA seq
DB search
MLRTLRPWRVGALAGLALVAACGGEPTPSAPPAVPVRTITVTRQEVPNVIELPGRIEAVR
SAEVRARSDGIVLRRLYEEGASVAAGTPLFEIDPRDYRAQVQSAEAALQRAIAAQQNAAS
IVTRYEPLIAERAVSAQEFDAAQSDLRQANAQVSEARAALDRARLQLSYTTVRAPIAGRA
SSAEVTEGALVSGAEGTLLTRVDQVSPVYAEFSVSSASVLDTFAQVRSGELAVPDLETIE
VSLILENGEEYGPVGHLDFASPVVSPETGSQTLRARFANPQRLLAPGQFVRGRIRLGVRK
DGMTVPARAVQFQGSQPQVSVMAEDGSVKARKVRLGALLGKDWIVNEGLKPGERVIVEGW
AKLRPGQKATEAKGEAKAPAQGTARAGGA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcgaactcttcgcccatggcgcgtcggcgcgctggctggacttgccctggtggcg
gcatgtggcggggagccgaccccgagcgcgccgcccgcggttcccgtccggacgatcacg
gtcacccggcaggaagtgcccaacgtgatcgaactgcccggccgtatcgaggcggtccgc
tcggccgaggtgcgcgcgcgcagcgacggtatcgtgctgcgccgtctctatgaggaaggt
gcgagcgtggcggcggggactccgctgttcgagatcgatccgcgtgactaccgcgcgcag
gtccagtcggccgaggcggcgctccagcgcgccattgccgcacagcagaacgcggcctcg
atcgtcacgcgctacgaaccgctgatcgccgagcgtgcggtaagcgcgcaggaattcgat
gccgcgcagtcggacctgcgccaggccaacgcgcaagtcagcgaggcgcgcgcggcgctc
gaccgcgccaggctccagctcagctacaccaccgtgcgcgcgcccatcgcgggccgcgcc
agcagcgccgaggtgaccgaaggcgcgctggtgagcggggcggaaggtacgctcctgacc
cgcgtcgaccaggtcagcccggtctacgccgagttcagcgtctccagcgcctcggtgctc
gacaccttcgcgcaggtgcgcagcggcgagctcgccgtgcccgatctggagaccatcgag
gtttcgctgatcctcgagaacggcgaggaatacggccctgtcggacacctcgacttcgca
agccccgtggtctcgcccgagaccggcagccagaccctgcgcgcgcgctttgccaatccg
cagcgcctgctcgcgcccggccagttcgtgcgcgggcgcatccggctaggtgtgcgcaag
gacgggatgacggtgcccgcgcgcgcggtccagttccagggctcgcagccgcaggtttcg
gtgatggccgaggacggttcggtcaaggcgcgcaaggtgcgcctgggtgccttgctgggc
aaggactggatcgtcaacgaggggctcaagcccggcgaacgcgtgattgtcgaaggctgg
gccaagctgcgtccgggccagaaggcgacggaagccaagggggaagccaaggcacctgcc
cagggcacggccagggccgggggcgcctga
DBGET
integrated database retrieval system
