Novosphingobium decolorationis: HT578_13465
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Entry
HT578_13465 CDS
T07993
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr01501
beta-Lactam resistance
ndr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HT578_13465
01503 Cationic antimicrobial peptide (CAMP) resistance
HT578_13465
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ndr02000
]
HT578_13465
01504 Antimicrobial resistance genes [BR:
ndr01504
]
HT578_13465
Transporters [BR:
ndr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HT578_13465
Antimicrobial resistance genes [BR:
ndr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HT578_13465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QVM84559
LinkDB
All DBs
Position
2892799..2896023
Genome browser
AA seq
1074 aa
AA seq
DB search
MDRFFVYRPVFGWVIAAFIALGGIIALFNLAIEQYPSVAPPSLNLSYTYTGADAETLDKN
VTSVIERELNGVDNYLYMASTSRSNGTGEITLTFESGTDLDVARVEVMDRLNRAEPRLPE
QVRQLGIQITDRASGFLMVVAMSSSDASMSALEVGNYTNNNVLNELRRVDGVGDVMLFGS
QYAMRIWIDPTRLAGYNLSASEVLAAVQEQNSQTAGGGLGEQPVTRETEFSAKIITQNRF
SDPEQFEQIIVKSNQDGSTVRLSDVARVELGAETYGFKARYNGKEIAGMAIQLATGANAV
ETAKAVRERLGQLEANFPDSLTWDVAFDSTPFINASVDSVIHTLVEAMVLVFAVMFLFLQ
NWRATLIPAVVVPIALLGACLGLYLFDFSINTLSLFAMVVAIGILVDDAIVVVENVERIM
SEEKLPPRLATIKAMGQIRGAIIGITLVLVAVFVPMAFFPGSTGGIYRQFSVTLAVSILF
SAVLALTFTPALCATLLREEHDDQDEDAPVPPGPRGWPRRFFRSFNERFGAATDRFTRTI
GTMLSGPMRWMAVFAVMAVLTGVLFTRLPGGFLPEEDQGYFMVNVDAPVGATMQRTEAVV
KQIEANLTAQPQVRSIISVVGFNFFGQSQSAGLAFVDLHPWEERKGEEDSINAIIGRFQR
FAGGLTDATVFALNPPAIQELGNATGFSLKVEDRSGNDREGLVAARDAILGEAMQNPALM
QVRPDGPGNAPELYVDIDRVKARALGLSIQSVNQMLAISFGSSYANDFTRDGNTLRVYVQ
ADAPARMTPDDVMNLRVRGENGQMVPFSAFAKSSWRSGPIQVERYNGYPSLTISGNAAPG
HSSGEALDIMEEIAARNLTGAMSYEWTGTAYEERQAGGQIGLLLGLSVIVVFLLLAALYN
SWGIPIAVLLVVPFGIMGAVVFTLLRSLSADVYFNIGLITIIGLAAKNAILIVEFAIEDE
DAGSSPREATLEASRQRLRPILMTSLAFILGMVPLAIASGAGAASRQAVGTGVMGGMIAA
TALGIFFTPVFYYLTRTYLSKRRDPEAEDARWLAQNRDDGDENGPGPEREIPHA
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcttcttcgtctaccggccggtcttcggctgggtcatcgccgcgtttatcgcg
ctgggcgggatcatcgcgctcttcaacctggccatcgagcagtacccatccgtcgcgccg
ccctcgctcaacctcagctacacctacaccggcgccgatgccgagacgctcgacaagaac
gtgacctcggtgatcgagcgcgagctgaacggggtcgacaactacctctacatggcttcg
acgagccgttcgaacggcacgggcgagatcacgctgaccttcgaatcaggcaccgatctc
gacgtcgcgcgggtcgaggtgatggaccggctcaaccgcgccgagccgcgcctgcccgag
caggtgcgccagttgggcatccagatcaccgaccgcgcctcgggcttcctgatggtcgtc
gcgatgtcctcgtccgatgcgtcgatgagcgcgctcgaggtcggcaactacaccaacaac
aatgtcctcaacgaactgcgccgggtggacggtgtgggcgatgtcatgctgttcggctcg
cagtacgcgatgcgcatctggatcgatccgacgcgcctggccgggtacaacctctcggcc
tccgaggtgctcgccgcggtgcaggagcagaacagccagaccgcgggcggtggccttggc
gaacagccggtcacgcgtgagaccgagttttcggccaagatcatcacccagaaccgtttt
tccgatcccgagcagttcgagcagatcatcgtcaagtcgaaccaggacggctcgaccgtg
cgcctctccgatgtggcgcgggtcgaactgggtgcggagacctacggcttcaaggcgcgc
tacaacggcaaggagatcgccggcatggcgattcagctggcgaccggtgccaacgcggtg
gagaccgccaaggccgtgcgcgagcgcctcggccaactggaagccaatttccccgacagt
cttacctgggacgtcgccttcgattccacccccttcatcaacgcctcggtcgacagcgtg
atccacacccttgtcgaggcgatggtgctggtcttcgcggtcatgttcctgttcctgcag
aactggcgcgcgacgctgatcccggccgtggtggtgcccatcgcgcttctgggcgcgtgt
ctgggcctctacctcttcgacttctcgatcaacacgctctcgcttttcgccatggtggtg
gcgatcggcatcctcgtcgacgacgccatcgtcgtggtcgaaaatgtcgagcggatcatg
agcgaggagaagcttccgccccgtctcgccacgatcaaggcgatgggccagatccgcggc
gcgatcatcggcatcacgctggtgcttgttgccgtgttcgtgccgatggccttcttcccg
ggctcgacgggcggcatctaccgccagttctcggtgacgcttgcggtctcgatcctgttc
tccgcggtgctggcgctcaccttcaccccggcgctgtgcgcgacgctcctgcgcgaggag
catgacgatcaggacgaggacgcccccgtgccgccgggcccgcgcggctggccccgtcgc
ttcttccgcagcttcaacgaacgcttcggggcggccaccgaccgcttcacgcgcaccatc
ggcaccatgctttcagggccgatgcgctggatggcggtgttcgcggtcatggcggtgctg
acgggtgtcctctttacccgccttcccggcggcttcctgcccgaagaggatcagggctac
ttcatggtcaacgtcgatgcgcccgtgggcgcgacgatgcagcgcaccgaagcggtggtg
aagcagatcgaggcgaacctcaccgcccagccccaggtccgctcgatcatctcggtggtg
ggcttcaacttcttcggccagagccagagcgcagggctcgccttcgtcgatctccacccc
tgggaggagcgcaagggcgaagaggacagcatcaacgcgatcatcggcaggttccagcgc
tttgcaggcgggctgaccgacgcgaccgtatttgccttgaacccccccgcgattcaggaa
ctgggcaacgccacgggcttctcgctcaaggtcgaggaccgttcggggaacgaccgggaa
gggcttgtcgcggcgcgcgacgcgatcctgggcgaggcgatgcagaacccggcgctgatg
caggtgcgccctgatgggccgggcaatgcgcccgaactctatgtcgacatcgaccgggtc
aaggcacgcgcgctcggcctctcgatccagtcggtgaaccagatgctggcgatcagcttc
ggctcgtcctacgccaacgacttcacgcgcgatggcaacacgctgcgcgtctacgtccag
gccgatgcgcccgcgcgcatgacgcccgatgatgtgatgaacctgcgcgtgcgcggggag
aacggccagatggtgcccttcagcgcttttgcgaagagttcgtggcggtccgggccgatc
caggtcgagcggtacaacggctacccctcgctcaccatttcgggcaacgccgcgccgggg
cactcctcgggcgaggcgctcgacatcatggaggagattgccgcgcgcaacctgacgggc
gcgatgagctacgagtggaccggcacggcctacgaggaacgccaggcgggcgggcagatc
ggcctgctcctgggcctgagcgtcatcgtcgtgttcctgctgctggccgcgctctacaac
agctggggcattcccatcgcggtgctgctggtggtgcccttcgggatcatgggggcggtg
gtcttcacgctgctgcgctcgctttcggccgacgtctatttcaacattggtctcatcacc
atcatcggcctggccgcgaagaacgcgatcctgatcgtcgagttcgccatcgaggacgag
gatgcgggcagctcgccgcgcgaggcgacgctggaggcctcgcgccagcgcctgcgtccg
atcctgatgaccagcctcgcctttatcctgggcatggtgccgctcgcgattgcctcgggc
gccggggcggcgagccgccaggcggtcggcacgggcgtcatgggcgggatgatcgcggcg
accgcactgggtatcttcttcacgccggtgttctactatctgacccgcacctacctcagc
aaacggcgcgaccctgaggccgaggacgcgcgctggctcgcgcagaaccgggatgacgga
gacgaaaacggccccggcccggagagggagatcccccatgcgtaa
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