Nostoc edaphicum: HUN01_28880
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Entry
HUN01_28880 CDS
T07001
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ned
Nostoc edaphicum
Pathway
ned01501
beta-Lactam resistance
ned01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ned00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HUN01_28880
01503 Cationic antimicrobial peptide (CAMP) resistance
HUN01_28880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ned03036
]
HUN01_28880
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ned02000
]
HUN01_28880
01504 Antimicrobial resistance genes [BR:
ned01504
]
HUN01_28880
Chromosome and associated proteins [BR:
ned03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HUN01_28880
Transporters [BR:
ned02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HUN01_28880
Antimicrobial resistance genes [BR:
ned01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HUN01_28880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
DUF5339
DUF4131
Motif
Other DBs
NCBI-ProteinID:
QMS91414
UniProt:
A0A7D7LGI1
LinkDB
All DBs
Position
complement(6189750..6191060)
Genome browser
AA seq
436 aa
AA seq
DB search
MTSPEPQTDFGEKAPQTSFEPPSGKRRWLWLFLAALLLLGGGVTIVWRLLTPQNSAPSTA
NAQPEGVRVKISTVQSGIIEESSDFIASLKSQRSVTLQPKIQGQVTQILVKSGDPVAEGA
AILQVDRTPQAAIALKNSVPPAFLMQLANARATLQSLEAERPSYIANVQLYEQNYEKFLA
LAEQGAVSRQTSNQFANRLANAKTSLNAIDSRIQVQRANILQAEKTLQQADVNTQTQQPQ
SDKITAPFSGTVGNLGVKVGNLVNTSTPLVNITQNRPLEVNISVPLQQAPQLRKGMPVEV
MNTQGQKLGRSRVFYIAPNPSTETQTILIKALFDNPNGQLRADQLVRARVFWNQRPGVLI
PTTAMTRVGGDTFVYVVETETSPQGVSQQVARQKRVKLGEIKDNNYQVIEGLQPEDKVII
SGLLNLRDGVAIVPEF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacatcccctgagcctcaaactgattttggagaaaaagctccacaaacctcatttgag
ccaccttctggaaaacggcggtggctttggttatttttagcagcactactattgttaggg
ggcggagtaactatagtttggcgtttgctcactccgcaaaattcagcaccttcaactgct
aacgctcaacctgaaggggtaagagtcaaaatatccacggtacaaagcggcatcattgag
gaaagttcagattttattgctagcctgaaatcccagcgctcagttacgctccagccgaag
attcagggccaagttacccagatacttgtgaaatcgggagatccagtagccgaaggagca
gcgattctccaagtagatcgtacaccacaagcagcgatcgctcttaaaaattctgtacct
ccagcatttttaatgcaactggcaaatgcccgcgctacactccaatctctggaagcagaa
cgaccatcatatattgcaaatgtgcaattgtatgagcaaaattatgaaaagtttcttgct
ctagcggaacaaggagccgtgtctcgacaaactagcaatcagttcgctaataggctcgct
aatgctaaaactagtcttaatgcaattgattccaggattcaagtacaacgagctaatata
ttgcaagctgaaaaaaccttgcagcaagctgatgtaaatactcaaacgcaacagccccag
tccgacaaaattaccgctccctttagtggcactgttggcaacctcggtgtgaaagtcggt
aatttagttaatacttctacaccattagttaatatcacccaaaatcgacctttagaagtg
aatatctctgtgccactacagcaggcgccccaattgcgtaagggaatgccagtggaagtt
atgaacacacaaggtcaaaagctgggtagaagtagggtattttacattgcacctaatcct
agtactgagacacaaacaatactgatcaaagcactttttgataatcctaacggtcagtta
cgtgcagatcaattggtaagggctagagtgttctggaatcaacgccccggagttttaatt
cccacaacagcaatgactcgtgtaggtggggacacttttgtttatgtagttgaaacagaa
acatctccccaaggcgtatctcaacaagtagctcggcaaaagcgagtgaagctaggcgag
atcaaagataataattaccaagttattgaaggattacagccagaagataaagttattatc
tcaggtttgctcaatcttagggatggtgttgcgatcgttccagaattttaa
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