Nocardia farcinica IFM 10152: NFA_32010
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Entry
NFA_32010 CDS
T00207
Name
(GenBank) hypothetical protein
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00550
Peptidoglycan biosynthesis
nfa01100
Metabolic pathways
nfa01502
Vancomycin resistance
nfa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NFA_32010
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NFA_32010
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NFA_32010
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nfa01002
]
NFA_32010
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nfa01011
]
NFA_32010
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
nfa01504
]
NFA_32010
Enzymes [BR:
nfa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
NFA_32010
Peptidases and inhibitors [BR:
nfa01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
NFA_32010
Peptidoglycan biosynthesis and degradation proteins [BR:
nfa01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
NFA_32010
Antimicrobial resistance genes [BR:
nfa01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
NFA_32010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
Peptidase_M15_3
Motif
Other DBs
NCBI-ProteinID:
BAD58048
NIH_Japan:
nfa32010
UniProt:
Q5YUU3
LinkDB
All DBs
Position
complement(3403643..3404380)
Genome browser
AA seq
245 aa
AA seq
DB search
MSRHGRVELSDTPIRVGVSLSECRASGGVIHRDLWICGLSLTVHCPPPARRPTRMIDRPG
CRATRSAPATMIAMSRRPQVITRRTLAAVLAGPVVLTGVLATATATAAPGEQREALGSAA
GTDGLDPALAVAYTLAEQAAHAEGVPLSITSGYRTPAEQQALWEDGLATYGSPEEARRWV
LPPEESTHVSGQAVDVGPQAGAQWLERNGNRWGLCRTYANEWWHFELATIPGGSCPPLRP
DASER
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcgacacggacgagtggaactgtccgacacgccaattcgggtcggcgtgtcactg
tcggagtgtcgcgcgagtggcggagttatccaccgcgacctgtggatatgtggattgtct
ctgactgttcactgcccgcccccggcgcgccgcccgacccggatgatcgaccggcccggc
tgccgggcgacccgctccgccccggctaccatgatcgccatgtcccggagaccccaggtg
atcaccaggcgaaccctcgcggccgtgctggccggtcccgtcgtcctcaccggcgtgctg
gccacggccaccgcgaccgcggcgccgggggagcagcgggaggcgctcggctcggcggcg
ggcaccgacgggctcgaccccgccctggcggtggcctacaccctcgcggagcaggccgcc
cacgccgagggggtgccgctgtcgatcacctccggctatcgcacgcccgccgaacagcag
gcgctgtgggaggacgggctggccacctacggcagcccggaggaggcccgccggtgggtg
ctgccgcccgaggaatccacgcacgtctccggccaggccgtcgacgtgggcccgcaggcg
ggcgcgcagtggctcgagcgcaacggcaaccgctggggactgtgtcgcacctacgccaac
gaatggtggcatttcgagctggcgacgatccccggcggcagctgcccgcccctgcgcccg
gacgcgagcgaacgctag
DBGET
integrated database retrieval system
