KEGG   Nocardia farcinica IFM 10152: NFA_44240
Entry
NFA_44240         CDS       T00207                                 
Name
(GenBank) hypothetical protein
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
nfa  Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:nfa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:nfa02048]
    NFA_44240
Prokaryotic defense system [BR:nfa02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    NFA_44240
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: BAD59275
NIH_Japan: nfa44240
UniProt: Q5YRB6
LinkDB
Position
complement(4586562..4587269)
AA seq 235 aa
MTVLLLRLAAPLQSWGVASRFARRETQQYPSKSGILGLIAAARGHRRTDPIEEALQNLAF
GVRVDQPGRLIRDFQVALNIDKTKQFPLSQRYYLADAVFLAAIQGERGLIEGIGNALRRP
EFPLYLGRRSCPVTGPLVLGEPRDVTLEHALHETEWQAATWYRRSQHRRVRLPIYRDLLP
GDPVELLREQVRDMPLSFDPVRREYGWRTVVEDYTTMLNAEGRIGHEPLAALGGD
NT seq 708 nt   +upstreamnt  +downstreamnt
gtgaccgtgctgttgctacgactggccgcccccttgcaatcctggggtgtcgccagccgg
ttcgcacgcagggaaacccagcagtatccgtcgaagagcggcattctcggactcatcgcc
gcggcccgcggacaccgtcgcaccgatccgatcgaagaagcgctgcagaacctggccttc
ggagtgcgggtggatcagccgggccggttgatccgcgattttcaggtcgccctgaacatc
gacaagaccaagcagtttccgctgtctcagcgctactacctggccgacgctgtgtttctc
gccgcgattcaaggtgagcgcggtctgatcgagggaatcggaaatgcgctgcggcgtccg
gagtttccactgtacctgggtaggcgctcctgtccggtgacagggccgctcgttctcggc
gagccccgcgacgtcacgttggaacacgccctgcacgaaaccgaatggcaggccgcgacg
tggtatcgacgttcgcagcatcgacgcgtccggctgccgatctatcgcgacctcctgccc
ggcgatcccgtggaactcctgcgtgagcaggttcgcgacatgccactcagcttcgatccg
gtccgtcgcgagtacggctggcgcactgtcgtggaggactacaccacgatgctgaacgcg
gagggccgcatcggacacgagccgctcgcggccctgggaggtgactga

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