Nocardia farcinica IFM 10152: NFA_46370
Help
Entry
NFA_46370 CDS
T00207
Name
(GenBank) putative dTDP-rhamnosyltransferase
KO
K16870
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:
2.4.1.289
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00572
Arabinogalactan biosynthesis - Mycobacterium
nfa01100
Metabolic pathways
Module
nfa_M00888
Galactofuranan biosynthesis, decaprenyl phosphate + UDP-GlcNAc (+ dTDP-Rha/UDP-Galf) => GL-5
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00572 Arabinogalactan biosynthesis - Mycobacterium
NFA_46370
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nfa01003
]
NFA_46370
Enzymes [BR:
nfa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.289 N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase
NFA_46370
Glycosyltransferases [BR:
nfa01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NFA_46370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_tranf_2_3
Glycos_transf_2
Glyco_trans_2_3
Glyco_transf_7C
Glyco_transf_21
Motif
Other DBs
NCBI-ProteinID:
BAD59488
NIH_Japan:
nfa46370
UniProt:
Q5YQQ3
LinkDB
All DBs
Position
complement(4826486..4827385)
Genome browser
AA seq
299 aa
AA seq
DB search
MSVSDSAASGGLAVVTVTYSPGEHLEHFVATLAAATSATPQVILADNGSVDGVPESVAEA
SANVRLLRTGGNIGYGAAINRAVAELDPGIEFVVIANPDIRWGAGAIDILLAAAARWPRA
GALGPLVREPDGSVYPSARAVPGLLDGAGHAILGAVWPGNPWTRRYRQEHEELAERAVGW
LSGSCLLVRRAAFESIDGFDSRYFMYMEDVDFGDRLGRAGWHNVFVPAAEVTHAKGHAAG
RHPERMLPAHHASAYRFQADRHPHWWQAPLRLALRAGLAIRSRLAVRSALRQQARERGR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtttccgattccgccgcctccggtggcctggccgtggtcacggtgacctattca
ccgggggagcacctcgagcacttcgtcgccacgctggccgccgcgaccagcgcgacgccg
caggtgatcctggccgacaacggctcggtcgacggcgtgccggaatcggtggccgaggcg
tcggcgaacgtgcggctgctgcgcaccggcggcaacatcggctacggcgccgcgatcaac
cgggcggttgccgagctcgaccccgggatcgagttcgtcgtcatcgccaacccggacatc
cgctggggtgcgggcgccatcgacatcctgctcgcggccgccgcgcgctggccacgcgcg
ggcgcgctcggcccgctggtgcgcgaaccggacggcagcgtctacccctccgcgcgcgcg
gtgcccggcctgctcgacggcgccggacacgcgatcctgggggcggtgtggccgggcaac
ccgtggacgcggcgctaccgccaggagcacgaggaactcgccgagcgcgccgtcggctgg
ttgtcgggttcgtgcctgctggtgcgccgggccgccttcgaatcgatcgacggcttcgac
tcccgctacttcatgtacatggaggacgtcgacttcggcgaccggctgggccgggcgggc
tggcacaacgtgttcgtgcccgccgccgaggtgacccacgccaagggacatgccgcggga
cgccatccggaacggatgctgcccgcccaccacgccagcgcctatcgcttccaggccgac
cggcatccgcactggtggcaggcgccgctgcggctggcgttgcgggccggacttgcgatc
cgctcccgtcttgcggttcgatctgcgctgcgccagcaagcgcgcgagcgcggtcggtag
DBGET
integrated database retrieval system
