Nocardia farcinica IFM 10152: NFA_46950
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Entry
NFA_46950 CDS
T00207
Symbol
sucA
Name
(GenBank) putative 2-oxoglutarate dehydrogenase
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00020
Citrate cycle (TCA cycle)
nfa00630
Glyoxylate and dicarboxylate metabolism
nfa00785
Lipoic acid metabolism
nfa01100
Metabolic pathways
nfa01110
Biosynthesis of secondary metabolites
nfa01120
Microbial metabolism in diverse environments
nfa01200
Carbon metabolism
nfa01210
2-Oxocarboxylic acid metabolism
Module
nfa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nfa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NFA_46950 (sucA)
00630 Glyoxylate and dicarboxylate metabolism
NFA_46950 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NFA_46950 (sucA)
Enzymes [BR:
nfa01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
NFA_46950 (sucA)
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
NFA_46950 (sucA)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
NFA_46950 (sucA)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
NFA_46950 (sucA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
BAD59546
UniProt:
Q5YQJ5
LinkDB
All DBs
Position
4901322..4905128
Genome browser
AA seq
1268 aa
AA seq
DB search
MYQKFKQDPSSVDESWHEFLADYTPDTTTDASDNGQQPPAPTTASPPGQAPARPAAAPSA
PASQQAAPAQSTAKPQQPAAKPQQAAAKPQQAAPKATESKATESKAAAPKATAAKGTART
PQTTPAPTSNAAPTSGGPKSAEAADESKVLRGAAAAVAKNMSASLSIPTATSVRAIPAKL
MIDNRLVINNHLARTRGGKISFTHLLGYAIVQAVKAFPNMNRHFAEIDGKPHAVTPAHTN
LGLAIDLPGKDGSRSLVVAAIKGAEEMTFAQFHSAYEDIVRRAREGKLTTEDFSGVTISL
TNPGTIGTVHSVPRLMPGQGAIIGAGAMEYPAEFQGMSDERIADIGVGKLMTLTSTYDHR
IIQGAESGDFLRTIHQLLISDEFYDEIFHGLGVPYEPVRWRKDIKERGVDKSTRVLEMIS
AYRNRGHLMADTDPLHLVKDKFRSHPDLDVTQHGLTLWDLDREFNVGGFHGQERMKLRDV
LSVLRDAYCRHVGVEYMHILDPEQLQWIQERVEQKHVKPTVAQQKYILNRLNAAEAFETF
LQTKYVGQKRFSLEGAESVIPMMDAVIDQCAEHALDEVVIGMPHRGRLNVLANIVGKPYS
KIFTEFEGNMNPAATHGSGDVKYHLGAEGTYLQMFGDNEIKVSLTANPSHLEAVDPVLEG
LVRAKQDLLDKGDGPEGFSVVPLMLHGDAAFAGQGVVAETLNLSGLRGYRTGGTIHIVVN
NQIGFTTAPENSRSTEYSTDIAKFIGAPIFHVNGDDPEACDWVARLAVDFRQKFRKDVVI
DLICYRRRGHNEGDDPSMTQPYMYDVIDTKRSVRKSYTESLIGRGDISLKEAEDALRDYQ
GQLERVFNEVRELEKYPPGPSESVEDDQRVPGTVHTAVDKSVLQRIGDAFINVPEGFNVH
PRVKPVLEKRREMAYEGKIDWAFAELLAFGTLIDEGRAVRLTGQDSRRGTFTQRHAVIID
RKTAAEYTPLHNIGSANPGWFAVHDSALSEFAAVGFEYGYSLGNPDALVLWEAQFGDFVN
GAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEGQGPDHTSGRIERFLQLCAEGSMTVAVP
STPANYFHLLRRHALDGIRRPLIVFTPKSMLRNKAVVSDLKDFTESKFRSVFDEPAYEQG
IGDRSKVKRILLTSGKLYYELAAEKAKQKREDVAIVRVEQLYPVPKFRINEALGGYPNAT
DIAWVQEEPANQGAWPFFGLNLPEMLPDRLGKLRRISRRAMSAPSSGSSKVHAVEQAEII
AEAFEPTS
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagaagttcaagcaagatccatcttcggtcgacgaaagttggcacgaattcctc
gccgactacacccctgacaccaccaccgacgccagcgacaacgggcagcagccgcccgcg
ccgacgaccgcctctccgcccggccaggcccccgcgcgacccgcggccgccccgtcggct
cccgcctcgcagcaggccgctcccgcgcagtccaccgccaagccccagcagcccgccgcc
aagccgcagcaggccgccgccaagccgcagcaggccgccccgaaggccaccgagagcaag
gccaccgagagcaaggccgccgccccgaaggccaccgccgccaagggcaccgcgcgcacg
ccgcagaccacccccgcgccgacctccaacgccgcgccgacctccggcggacccaagtcc
gccgaggccgccgacgagtcgaaggtgctgcgcggcgccgccgcggcggtcgcgaagaac
atgtcggcctcgctgagcatccccaccgccacctcggtgcgtgccatcccggccaagctg
atgatcgacaaccgcctggtcatcaacaaccacctggcccgcacccgcggcggcaagatc
tccttcacccacctgctcggctacgccatcgtgcaggcggtcaaggcgttcccgaacatg
aaccgccacttcgccgagatcgacggcaagccgcacgcggtcacccccgcgcacaccaac
ctgggcctggccatcgacctgcccggcaaggacggcagccgctcgctggtcgtggccgcc
atcaagggcgccgaggagatgaccttcgcccagttccactccgcctacgaggacatcgtg
cggcgggcgcgcgagggcaagctcaccaccgaggacttctccggcgtcaccatctcgctc
accaacccgggcaccatcggcaccgtgcactcggtgccgcggctgatgcccggccagggc
gccatcatcggcgcgggcgcgatggagtacccggccgaattccagggcatgagcgacgag
cggatcgccgacatcggcgtcggcaagctcatgacgctgacctcgacctacgaccaccgc
atcatccagggcgcggagtccggcgacttcctgcgcaccatccatcagctgctgatctcc
gacgagttctacgacgagatcttccacggcctcggggtgccctacgagccggtgcgctgg
cgcaaggacatcaaggagcgcggcgtcgacaagagcacccgcgtgctcgagatgatctcg
gcctaccgcaaccgcggtcacctgatggccgacaccgacccgctgcacctggtcaaggac
aagttccgcagccaccccgacctcgacgtcacccagcacgggctgaccctgtgggacctc
gaccgcgagttcaacgtgggcggcttccacggccaggagcgcatgaagctgcgcgacgtg
ctctcggtgctgcgcgacgcgtactgccgccacgtcggcgtggagtacatgcacatcctc
gatcccgagcagctgcagtggatccaggagcgggtcgagcagaagcacgtcaagccgacc
gtcgcccagcagaagtacatcctgaaccggctcaacgccgccgaggcgttcgagaccttc
ctgcagaccaagtacgtcggccagaagcggttctcgctggagggcgccgagtcggtcatc
ccgatgatggacgccgtcatcgaccagtgcgccgagcacgccctcgacgaggtcgtcatc
ggcatgccgcaccgcggccggctcaacgtgctggccaacatcgtcggcaagccctactcg
aagatcttcaccgagttcgagggcaacatgaacccggccgccacgcacggctcgggcgac
gtgaagtaccacctcggcgccgagggcacctacctgcagatgttcggcgacaacgagatc
aaggtctcgctgaccgccaacccctcgcacctcgaggcggtcgacccggtgctcgagggc
ctggtgcgcgccaagcaggatctgctggacaagggcgacggccccgagggcttctcggtc
gtgccgctgatgctgcacggtgacgccgcgttcgccggtcagggcgtggtcgccgagacg
ctgaacctctccggcctgcgcggataccgcaccggcggcaccatccacatcgtggtgaac
aaccagatcggcttcaccaccgccccggagaacagccgctccaccgagtactccaccgac
atcgcgaagttcatcggcgcgccgatcttccacgtcaacggcgacgacccggaggcgtgc
gactgggtcgcgcgcctggcggtcgacttccggcagaagttccgcaaggacgtggtcatc
gacctcatctgctaccgccgccgcgggcacaacgagggcgacgacccgtcgatgacccag
ccgtacatgtacgacgtcatcgacaccaagcgctcggtgcgcaagagctacaccgagagc
ctgatcggccgcggcgacatctcgctcaaggaggccgaggacgcgctgcgcgactaccag
ggccagctggaacgggtgttcaacgaagtccgcgaactggagaaatacccaccgggcccg
agcgaatcggtcgaagacgaccagcgggtgcccggcaccgtgcacaccgcggtggacaag
tcggtgctgcagcgcatcggtgacgcgttcatcaacgtgcccgagggcttcaacgtgcac
ccgcgcgtgaagcccgtgctggagaagcgccgcgagatggcctacgagggcaagatcgac
tgggccttcgccgagctgctcgccttcggcacgctcatcgacgagggccgggccgtgcgc
ctgaccggccaggactcccgccgtggcacgttcacccagcggcacgcggtgatcatcgac
cgcaagaccgccgcggagtacaccccgctgcacaacatcggcagcgccaacccgggctgg
ttcgccgtgcacgactcggcgctgagcgagttcgccgccgtcggtttcgaatacggctac
tcgctgggtaacccggatgcgctggtgctgtgggaggcgcagttcggcgacttcgtcaac
ggcgcgcagtcgatcatcgacgagttcatctcctccggtgaggccaagtggggccagctc
tccgacgtcgtgctgctgctgccgcacggccacgaggggcagggcccggaccacacctct
ggtcgcatcgaacgcttcctgcagctgtgcgcggaggggtcgatgacggtcgcggtgccg
tccaccccggccaactacttccacctgctgcgccggcacgcgctcgacggcatccgccgt
ccgctcatcgtcttcaccccgaagtcgatgctgcgcaacaaggccgtggtctcggatctg
aaggacttcaccgagtccaagttccggtcggtgttcgacgagcccgcatacgagcagggc
atcggcgaccgcagcaaggtcaagcgcatcctgctgaccagcggcaagctctactacgag
ctggccgcggagaaggccaagcagaagcgcgaggacgtggcgatcgtgcgtgtcgagcag
ctctacccggtgccgaagttccgcatcaacgaggcgctgggcggctacccgaacgcgacc
gacatcgcctgggtccaggaggagcccgccaaccagggcgcctggccgttcttcggcctc
aacctgcccgagatgctccccgaccgactgggcaagctgcgccgcatctcccgccgcgcc
atgtcggccccgtcctcgggttcctcgaaggtgcacgccgtcgagcaggcggagatcatc
gccgaagccttcgagccgaccagctag
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integrated database retrieval system
