Nocardia farcinica IFM 10152: NFA_53040
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Entry
NFA_53040 CDS
T00207
Name
(GenBank) putative dioxygenase
KO
K00451
homogentisate 1,2-dioxygenase [EC:
1.13.11.5
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00350
Tyrosine metabolism
nfa00643
Styrene degradation
nfa01100
Metabolic pathways
nfa01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
NFA_53040
09111 Xenobiotics biodegradation and metabolism
00643 Styrene degradation
NFA_53040
Enzymes [BR:
nfa01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.5 homogentisate 1,2-dioxygenase
NFA_53040
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Gene cluster
GFIT
Motif
Pfam:
HgmA_N
Cupin_2
HgmA_C
AraC_binding
Motif
Other DBs
NCBI-ProteinID:
BAD60156
NIH_Japan:
nfa53040
UniProt:
Q5YNT5
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Position
5604698..5605903
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AA seq
401 aa
AA seq
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MPAVAFYRQVGAVPPKRHTQHRDEHGGLYYEELMGEEGFSSDSALLYHRALPPAIVDAAD
QPLPDQTTVPNHPLRHRHLRPHELFPGDTPAGTDPVTGRRLLLANADVRLSYVAAKGASP
LYRNALGDELVYVESGAAIVETVFGALPVRQGDQVLIPRATTHRWLPAGPDPLRTYVVEA
TGHITPPRRYLSRFGQLLEHAPYCERDLRAPVEPLLRTGTDVAVLVKHRAGGRVVGTRMV
HATHPFDVVGWDGCLYPYILNIADFEPITGRVHQPPPVHQAFEGNGFVVCDFVPRKVDYH
PLSIPVPYYHSNVDSDEVMFYAGGNYAARKGSGIGQGSVSVHPGGYAHGPQPGAYEGSIG
AEFFDELAVMVDTFRPLELGEGALACEDPGYAWTWSGRGPA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgcggtggcgttctatcgacaggtgggtgcggtgccgccgaaacggcacacccag
caccgtgacgagcacggcgggctctactacgaggagctgatgggcgaggagggcttctcc
agcgactccgccctgctgtaccaccgcgccctgcccccggccatcgtcgacgcggccgac
cagccgctgcccgatcagacgaccgtcccgaatcatccactgcgccaccggcatctgcgc
ccgcacgagctctttcccggcgacaccccggcgggcaccgacccggtgaccggccggcgg
ctgttgctcgccaacgccgacgtacgcctgtcctacgtcgccgccaagggcgcctccccg
ctgtaccgcaacgctctcggggacgagctggtctacgtggaatccggcgccgcgatcgtg
gagacggtgttcggcgcgctgccggtgcgtcagggcgaccaggtgctcatcccgcgcgcg
accacgcaccgctggctgcccgccggccccgacccgctgcgcacctacgtcgtggaggcc
accgggcacatcaccccgcccaggcgctacctgtcccgcttcgggcagttgctcgagcac
gcgccctactgcgagcgggatctgcgcgcgcccgtcgagccactgctgcggacgggcacc
gacgtggcggtgctggtgaagcaccgcgcgggcggacgggtggtcggcacgcggatggtg
cacgccacgcatcccttcgacgtggtcggctgggacggctgcctgtatccgtacatcctg
aacatcgccgatttcgagccgatcaccggacgggtgcaccagccgcccccggtgcaccag
gcgttcgagggcaacggcttcgtggtctgcgacttcgtgccgcgcaaggtcgactaccac
ccgctgtcgattccggtgccctactaccactccaacgtggattccgacgaggtgatgttc
tacgcgggcgggaactacgcggcgcgcaagggctcgggcatcgggcagggttcggtgtcg
gtgcatcccggtggctacgcccacggtccgcaaccgggcgcctacgagggcagcatcggc
gcggagttcttcgacgagctggccgtcatggtcgacaccttccggccgctcgagctcggc
gagggggcgttggcctgcgaagaccccgggtacgcctggacctggtcgggccggggcccg
gcatga
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