Nocardia farcinica IFM 10152: NFA_6940
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Entry
NFA_6940 CDS
T00207
Name
(GenBank) putative two-component system sensor kinase
KO
K18351
two-component system, OmpR family, sensor histidine kinase VanS [EC:
2.7.13.3
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa01502
Vancomycin resistance
nfa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NFA_6940
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NFA_6940
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nfa01001
]
NFA_6940
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
nfa02022
]
NFA_6940
01504 Antimicrobial resistance genes [BR:
nfa01504
]
NFA_6940
Enzymes [BR:
nfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
NFA_6940
Protein kinases [BR:
nfa01001
]
Histidine kinases
OmpR family
NFA_6940
Two-component system [BR:
nfa02022
]
OmpR family
VanS-VanR (actinomycete type vancomycin resistance)
NFA_6940
Antimicrobial resistance genes [BR:
nfa01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
NFA_6940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HAMP
HisKA
HATPase_c_5
DUF922
DUF746
Motif
Other DBs
NCBI-ProteinID:
BAD55539
NIH_Japan:
nfa6940
UniProt:
Q5Z202
LinkDB
All DBs
Position
721235..722341
Genome browser
AA seq
368 aa
AA seq
DB search
MARRQGLSVRAKLTLSYVGFLMLAGALLLAAVWVFLLRGRSNALLVPDLSDFRRVFDPGS
FGAAVFVPAAILVLGFLLVFGLVGGWILAGRVLSPLTRITQATRAAASGSLSQRIRLPGR
SDEFRELADSFDTMLAQLEAHVAEQRRFAANASHELRTPLAITQALLDVARNDPDVDTGE
LIERLRTVNTRAIDLTEALLLLSRADQRSFPRAHVDLSLMAEEAGETLLPLAEERGIAME
TSGDITPTMGSPALLLQLITNLVHNAIIHNVPDCGSVWVRTSAHPGTVAITVENTGEKVL
PHVVPMLVEPFRRGTERVHVDHAGAGLGLAIVQSITRAHNGTLTLTPRPSGGLRVTVQLP
AAPSHTDG
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
gtggctaggcgtcaagggttgagcgtgcgcgcgaaactgaccctcagctacgtcgggttt
ctcatgctcgcgggtgccttgctgctcgccgccgtgtgggtattcctgctgcgaggaaga
tcgaacgccctactcgttcccgatctgtccgacttccggcgcgtcttcgatccaggcagc
ttcggcgccgccgtcttcgtcccggcggcaatcctcgtgctggggtttctgctggtgttc
ggtctcgtaggcgggtggattctcgccggtcgcgtactctcgcccctgactcgaatcacg
caggccacccgggcggccgcgtccggatcgttgtcccagcggatccggctgccggggcgc
agcgacgagttccgtgaactcgccgacagtttcgacaccatgctcgcccagctggaagcc
cacgtagccgaacagcggagattcgccgccaacgcttcccacgaactgcgcactccgctg
gcgatcacacaggcacttctcgacgtggcccgcaacgacccggacgtcgacaccggtgaa
ctcatcgaacgacttcgtaccgtcaacacccgagcgatcgacctgaccgaggcattactc
ctgctcagccgcgccgatcagcgttccttcccccgagcgcacgtcgacctgtccctcatg
gcggaagaagccggggaaacacttctccccctcgcggaagaacgcggtatcgctatggag
acctccggcgacataaccccgaccatgggctcgccagccctcctcctgcagttgatcacc
aacctcgtgcacaacgcgatcatccacaacgtgcccgattgtggcagcgtatgggtcagg
accagcgcgcatcccggtacggtcgcgatcactgtcgagaacaccggcgaaaaggtcttg
ccgcacgtggttcccatgctggtcgaaccgtttcgccgcggcaccgagcgcgtgcacgtc
gaccacgccggtgccgggctgggcctggcgatcgtccagagcatcacgcgcgctcacaac
ggaaccctaaccctcactccccgtccctccggagggctccgagtcaccgtgcaactacct
gcggcaccgtcacacaccgacggctga
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integrated database retrieval system
