Neodiprion fabricii: 124174427
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Entry
124174427 CDS
T08986
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
nfb
Neodiprion fabricii
Pathway
nfb03018
RNA degradation
nfb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124174427
09123 Folding, sorting and degradation
03018 RNA degradation
124174427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfb03019
]
124174427
03041 Spliceosome [BR:
nfb03041
]
124174427
Messenger RNA biogenesis [BR:
nfb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124174427
mRNA degradation factors
5'-3' decay
Lsm complex
124174427
Spliceosome [BR:
nfb03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124174427
Complex C
U2 snRNP components
124174427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
TIG_SUH
DUF150_C
vATP-synt_E
Motif
Other DBs
NCBI-GeneID:
124174427
NCBI-ProteinID:
XP_046409538
LinkDB
All DBs
Position
1:complement(24520915..24522536)
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AA seq
103 aa
AA seq
DB search
MADDAEQVPAINVKEPLDLIRLSLDERIYVKMRNERELRGRLHAYDQHLNMVLGEAEETV
TTVEIDEETYEEVYRTTKRNIPMLFVRGDGVILVSPPSMRAPI
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgatgcagagcaggttcctgccatcaacgttaaggaaccgttagatctaatc
agactcagcttggatgagcgaatttacgtcaaaatgagaaacgaaagggaactcagagga
agactacacgcctatgatcaacatttaaatatggttctgggggaggcagaggaaactgta
acaaccgttgagatagacgaagaaacctacgaggaagtttacagaacgactaaaagaaat
attccaatgttgtttgttcgtggcgacggtgtcattctggtatctccgccaagcatgagg
gcgccaatctaa
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