Neodiprion fabricii: 124176424
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Entry
124176424 CDS
T08986
Name
(RefSeq) otoferlin-like isoform X1
KO
K19949
otoferlin
Organism
nfb
Neodiprion fabricii
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfb04131
]
124176424
Membrane trafficking [BR:
nfb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124176424
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Ferlin_C
dsrm_Ferlin
FerB
FerI
Motif
Other DBs
NCBI-GeneID:
124176424
NCBI-ProteinID:
XP_046413657
LinkDB
All DBs
Position
2:41853830..41891655
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AA seq
2067 aa
AA seq
DB search
MSLVVSIKNVQALKFKGEKFVKIDFRGATHCSRSLDENGDLIVVDQSFTWNLGRPVEESE
TLQLTVVSRGILRSEKTVAKYGLILQTVIQEGRILISDSLVDLSNRPLPAVVTLEVRYTP
PDGSCSSYAGTEIMEDEQRMLIDIEQNIATLERSLEEANSMRRRGSWHSPAEKARKRGSG
TMQRGSSMSAAEGSPERKRSSTLKSVRSLMRLGKQRPPRDKSCDSNSESRGLLEQHDFSC
TSSNAVSRTNSMTSFELNPSDDSQVSGNDAENNSAKSLRRAQPKSGEVGQSALKAQDYQI
CVTVIEARQLAGLNMDPTVCVQVGDQRKYTSVKESTNCPYYNEYFVFDFHMPPIMLFDKI
ITLSVQQSRNLLRPNLTLGSFKLDVATVWAQPDHQFYHKWALLTDPDDVAGGPKGYLKCD
VSVIGKGDSVKIPPKSEKDEDDIEGNLLLPDGVPIERQRARFVVKIYRADGLPKMNSSIM
ANVKKAFTGEAKDLVDPYVQVSFAGLCGKTSVKRNSYAPVWNEQIVFTEMFPPLCQRIKI
QLRDNDPVHASVISTHFVDLKQVSNDGEKGFLPTFGPAFVHMYGSIRDYSLIDEHSTLNM
GLGEGISYRGRLLIAIRTEISDNVDMAPSDVEVEPTTPITESSYARNEEFFMFATIMDAT
MIDKRLGDKPVYFEMSIGNAGNSLDGYNESSKVCEMSIQGGAGGSGDEDELQEVVTDSCQ
STTQPCKPMTHDKMYYFLPYWDNKPCLHVRSIWPDYRRRMYSSNIIGKIADKLEESLAQV
MSRVEDTTAEKCLKIAFEELSSNCNRYASISRSFTTGPGVGKTKLDKERSKLCQREIENI
GNMSRSLKATVTKSSFKERLKTAQTYLQRLRLLVDDPQDSLPDVFIWVVSSGKRVAYHRI
QGRDLIYSIVDEECGRYCGKIQTMFLKLPGKKRFGPSGWAIQTKLQIYIWLGILKHKKYF
IQGLPKGYEVSHELKNVDRPRALPPSTIHYIRKHKFQLRAHMYQARSLIGSDASGLSDPF
ARVICGEFCRSTQVIDETLSPTWDELLLFDDILIYGTAEEIKNDPPSIIVELFDQDKVGK
SEYIGRAIARPHVKLASESYGPPQFPPSLEWYDVTRGIARAGELLAVFELLEHPSVKDYG
FPTLPDPKLRDLGLHQGNSSGLDTLGSILPVPIGIRPTLSKYRIEVLFWGLRDLKRVHLL
TVDKPRVDVECAGHILYSSVISNAKKNPNFSTPIKFMELELPEQELYRPPLTIRAVDCRS
FGRYTLVGTHTISSIHKYMHCPQTRYNPRDVEDRKRSPHHVQSFDQFKAKNQHSLLLDTF
TDNDSCNGDSIIKLGFELTDNWPTTKRDKTEQNVRRRHSLATNDSSGDLTALEDENGCQD
WWTKYFASIEAMIEENKEMLRKGKSLFPNQQNGTLPTYLDQDLASRGNATNSTGDKSPGI
HSTRKLFGLRPTGNTTHLSSKLSPKHMSRNVCDKTALLKIYPNELEAQPEYEHFKEWLHT
FELYRGKKMGDEPEDESRIVGSFKGALKVYKWPLPKDLVDHNGMSFDPQYGFFQGLPSND
PIHVLVRVYIVKANDLHPCDLNGKADPYVVLQLGGKSISDKDSYVSKQLNPVFGKCFEIE
ATFPQDSLLTVQVLDWDLVGSDDLIGETKIDLENRFYSRHRATCGLARKYDDSGYNKWRD
ALKPTQILSKLCKDGKLDGPSYTHGRVTIGRKNFTLSHDEMENYVHTKGMEEHLALAVLH
QWSSFPRLGTTLVPEHVETRPLYNPDKPGIEQGKLEMWVDLFPMDMPLPGPPLDISPRKP
KSYELRIIIWNTDDVVLEDDAFFTGEKMSDIYVKGWLKGPEDCQCTDIHYRSLTGEGNFN
WRLIFPFDYLVAEEKIVINRKESLFSWDETECKIPARLELQVWDADHFSADDFLGAITLD
LNRFPRGAKNSKLCTLEMLKVDGSVPMVNIFKQKRIKGWWPFYVKKECEDMELTGKVEAE
IHLLTKEEAEKNPTGYGRNEPDPLDKPNRPDASFMWFLNPLKSIKYIVWHNYKWAILRIF
VLIAVALLVLLFFYAIPGYSVKKILGA
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcgtggtgagcattaagaacgtccaagctctcaagttcaagggagaaaagttc
gtcaagatcgacttcagaggtgcgacacactgttctcgaagtctcgacgaaaacggagat
ctcattgtcgtagatcagagtttcacttggaatttgggaaggccggtggaggagtcggag
acgcttcagctgactgttgtatcccgagggattttgcgcagtgaaaaaacagtcgcgaaa
tacggtttaattcttcagactgtcattcaagaagggaggattctaatcagcgattcactg
gttgatctaagcaaccggccacttccggcagtcgttacactcgaggtgcgttacacaccc
ccggacggtagctgtagctcttatgccggtacagaaataatggaggatgaacaaaggatg
ctaatcgatattgagcaaaacattgcaactttggagcgaagcctcgaggaggcaaattcc
atgagacgtcggggttcatggcacagccccgcagagaaggcaaggaagcgaggatcagga
accatgcagcggggcagctccatgtctgcggcggaagggtcgccggaacggaaacggagt
tctactctgaaaagcgtccgctccctcatgaggcttgggaagcagagaccaccgagagac
aaatcatgcgacagtaactctgagtcacggggacttttggagcaacacgatttcagctgc
acttcgtcaaatgcagtttctcggacaaattcaatgacatcgttcgaattgaatccgtcc
gacgacagccaggtcagtggcaacgacgcggaaaacaactcggcgaaatccttgaggaga
gcccaacccaagagtggtgaagtgggacagagtgcccttaaagcccaagactatcagatt
tgcgtgactgtcatagaagcgagacaactcgctggactcaacatggatccgacggtttgc
gtccaagtcggtgaccaacggaaatacactagtgtcaaagagtccacgaactgtccctat
tacaatgagtatttcgtgttcgacttccacatgccgccgattatgctgtttgacaagatt
atcactttatcggtgcagcaatcgcggaaccttctacgtcctaatctaacactgggcagc
tttaagttagatgtagccaccgtctgggctcagccagatcatcaattctatcacaagtgg
gcactgcttactgaccccgacgacgtcgccggagggccaaagggatatctgaaatgcgac
gtcagtgtgattgggaaaggggactcggtcaagataccgccgaagagtgaaaaggacgag
gacgacatcgaagggaatctgctgctgccggacggtgtgccgattgaacgacagcgagcc
agatttgtggtaaaaatttacagagccgacggtctaccaaagatgaacagcagtataatg
gctaatgtgaagaaggcatttactggcgaggcaaaagatttggtcgacccctacgtgcaa
gtctcctttgccggactctgcggcaaaacaagcgtaaaacgcaacagttacgcacctgtg
tggaacgaacagatagtttttaccgaaatgtttccgcctctgtgccagcgcatcaagatt
caactccgcgacaacgacccggttcatgcatctgtaatcagcacccatttcgtcgatctc
aagcaagtgagcaacgacggtgagaagggtttcctaccaactttcgggccagctttcgtc
cacatgtacggtagcatcagagattatagtctcatcgacgaacattcaactttgaacatg
ggtttgggcgaaggaatatcttacagaggaagactccttatagccatcagaactgaaata
agtgacaacgttgacatggcgccgtcagatgttgaagttgagccgacgacaccgataacc
gagtcgtcttatgcccggaacgaggagtttttcatgttcgcgaccattatggacgcgacg
atgattgataagagactcggggataaaccggtgtactttgaaatgtcaattgggaacgcc
gggaactcgttggatggatacaatgaaagctctaaggtttgtgaaatgagcattcaaggc
ggtgccggcggaagcggagacgaggatgagcttcaagaagtcgttacagattcttgtcaa
agtacaacgcagccgtgcaagccaatgacccacgacaaaatgtattatttcctaccttac
tgggacaacaagccctgcttacacgtgcggagcatttggcccgactatcgccgaagaatg
tacagcagcaacataatcgggaaaatagcggataaactggaagaaagcctagcccaagtg
atgtcacgcgtcgaggatactactgccgagaaatgcttgaaaattgctttcgaggaattg
agcagcaattgtaatcggtacgccagcatcagtagatctttcaccaccggaccgggtgtt
ggcaaaacgaaactggacaaagagaggtcgaagctgtgtcaaagggagattgaaaatatt
gggaacatgtcaaggagcttaaaagctacggtcaccaagagtagcttcaaagaaagactc
aagactgcccaaacttacttgcaaagactcaggctactcgttgacgacccccaagattcg
ctaccggatgttttcatatgggttgtaagttctggaaaacgagtagcctatcacagaatt
cagggaagagatttaatctattccatcgtagacgaagaatgcggccggtactgcggcaag
attcaaactatgtttttaaagctgcctggaaagaagagattcggcccatccggatgggca
attcagaccaaattacaaatatacatctggctcggtatattgaagcacaagaagtatttt
atacaggggctacccaagggttatgaagtcagtcacgaactgaaaaacgtcgacaggccg
cgagccctgcctccgtcaacgatccattacattcgaaaacacaaattccaattgagggca
cacatgtatcaagcaaggtcactcattggtagcgacgcttcggggctgtccgatcccttc
gctcgagtcatttgtggcgagttctgtaggtcaacacaggtaatcgacgaaaccttaagt
ccaacgtgggacgaacttctgctctttgatgacatattgatatacggaacggccgaagaa
ataaaaaacgatccaccctcgattatcgttgagctgttcgatcaggacaaagtgggaaag
tcggagtacatcggcagagcgatagctcgaccccatgtgaaattagcttcagagtcgtac
ggtccgcctcagttcccaccgtcgttggaatggtacgacgtgacgagagggatcgccaga
gccggcgagctgctcgctgtgttcgaactcctggagcatccgtcggtgaaggattatggt
ttccccacgctccctgaccccaagctccgagatcttggtcttcatcaaggaaactcatct
ggcctcgatacgttaggatcaattcttcccgttcccatcggcatcaggcctaccctctcg
aaatacagaatcgaggttctcttctggggacttcgtgatctgaagcgagtacacttgcta
acggtcgacaaacctcgcgtcgacgttgagtgtgccggtcacatactttactcgtcagta
atttcaaacgcaaagaaaaatccaaatttcagcacgcccataaaatttatggaactggag
cttcccgagcaagagctctaccgtccgccactgacaattcgtgctgttgactgtcggagt
tttggtagatataccctcgttggaacgcacacaataagctccattcacaaatacatgcat
tgtccgcaaacaaggtataacccgagagacgtcgaggacaggaaaagaagtcctcatcac
gtacaatcgttcgaccagtttaaggcgaagaaccagcatagcctgcttttagatacgttt
acggacaacgattcatgcaacggtgattcgattatcaagctgggattcgagctaaccgat
aattggcctacaacgaagcgggacaaaactgagcagaatgttcgtcggaggcacagtttg
gccaccaacgatagctcaggtgatttgacggcccttgaagacgagaatggctgccaggat
tggtggaccaaatattttgcgtcaatcgaggcaatgattgaggagaacaaagagatgtta
cggaaaggaaagtcattattcccgaaccagcagaacggcacacttccgacatatttggac
caagaccttgcatctcgcggtaacgcgactaattctacaggtgacaagagcccaggtatt
cactcgacaaggaagcttttcggtttgcggcccacgggaaacacgacgcatctttcttca
aaattaagccccaagcacatgtctcggaacgtatgcgataaaacggcattgttgaaaatc
tatcctaacgaactcgaagcacagcctgagtatgaacatttcaaggagtggttgcacact
tttgaattgtacagaggtaaaaagatgggtgacgaacccgaggacgagtcacgaatcgtt
ggtagcttcaaaggagctttgaaggtttacaagtggccactgccaaaagatctcgtggat
cataacgggatgagttttgatccgcaatacggcttctttcagggattgccctcgaacgat
cctatacacgttctggtcagggtatacatagtcaaagcaaatgacctgcatccctgcgat
ttgaacggcaaagccgatccctacgttgttctgcagcttggcggcaagagcatcagcgac
aaggatagctacgtatcaaagcaattgaacccagtattcggaaagtgtttcgaaattgaa
gctacctttccgcaggactcacttctcacggtacaggtattggactgggatctggttgga
tcagatgatctaatcggggagactaagattgacttggaaaatcggttctacagcaggcat
cgtgctacgtgcggactagcaaggaaatacgacgactccggttacaacaagtggcgagac
gcccttaaaccaacgcaaatactgtcgaagctctgtaaagatgggaaattggacggtcca
tcttacacccacggacgagtaacaatcggacgtaaaaatttcacactgtctcatgacgaa
atggagaattatgtccatacaaaaggcatggaggaacatctcgccttggcagtcctacat
cagtggagctcgtttcctcgactaggtactacgttggtaccggagcacgtggaaacacgc
ccgttgtacaatcctgacaaacctggcattgagcagggtaagctcgagatgtgggtggat
ctatttccgatggacatgcctctgcctggcccaccgttggacatttccccaaggaaacca
aaaagttatgagctgagaattattatctggaatacggacgacgtcgtcttggaggacgac
gcgttttttaccggtgaaaaaatgagcgacatctatgttaagggatggctgaaagggcca
gaagattgccagtgcacagatattcattatagatcgttaaccggcgagggcaattttaac
tggcggttgatatttccattcgactaccttgtagccgaggaaaagattgtcatcaaccga
aaggagagtttgttcagttgggacgaaacggaatgtaaaatacccgcacgattggaatta
caggtgtgggatgcggatcatttctcggctgatgattttcttggagcaatcacgttggac
ttgaatcgatttccacggggcgcgaagaacagtaagctgtgcaccttggaaatgttgaaa
gtggatggatctgtgccgatggtcaatatattcaagcagaagcgtatcaaaggatggtgg
cctttttacgtgaagaaggaatgtgaggacatggaattaacgggaaaagttgaagctgaa
atacatttactaacaaaagaagaggctgagaaaaatcctaccggttacggaagaaacgaa
ccggaccctctcgacaagccaaatcggccggacgcttcatttatgtggtttctgaatcct
cttaagtctatcaagtatatcgtatggcacaactacaagtgggcaatactccgaattttc
gtactcattgccgtagctttgttggttctcctttttttctacgctatccctggatattca
gtgaaaaaaattttaggcgcttaa
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integrated database retrieval system