Aspergillus fischeri: NFIA_039650
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Entry
NFIA_039650 CDS
T01070
Name
(RefSeq) ATP-dependent DNA ligase, putative
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
nfi
Aspergillus fischeri
Pathway
nfi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NFIA_039650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfi03400
]
NFIA_039650
Enzymes [BR:
nfi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
NFIA_039650
DNA repair and recombination proteins [BR:
nfi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
NFIA_039650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
Paramyxo_C
Motif
Other DBs
NCBI-GeneID:
4592806
NCBI-ProteinID:
XP_001266286
UniProt:
A1D069
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MVFKFTYLCDLLSELERNRVLKASTAAKASNPDHRAVTRWFAQHAKRIHASDTDRIALLS
CIFPEKRTDRVYWLRCTNLSRVIGRCLLLGSDRRQELEQWRVAGGTDLGQCVENVMRQAE
FDIISGQEVTVEEIDLALNKIASRCRFSGSRVRRQHSAVDVEDTLRPLYRRMSSRDAKWL
TRMILKSYHPVVLPAKLTMKSFHFLLPHLLLFQDSFDSALKMLASEPLCHYPPNPIPELA
KDLCIQALQHLKPRIGTKIGRPEYYKARSIKHCCQMIGRRRMSVERKYDGEYCQIHIDLT
KRPNPIQIFSKSGKDSTDDRAGIHAVIKDSLNIGTPECKFSRQCILEGEILVWSDNHGKI
ADFHKLRKFIARSGTFIGIDNDSPPQPYEHLMIVFFDILLLDDDICLRKPHRERRLLLKD
VVKVIDGYADIAEQHIVEFSHPDGRSRLETIFSKAVTERWEGLVLKGCEDPYVSMFPGSE
NGSAGRWIKLKKDYIPGLGDTVDLALIGAKYDSRDAAALNLSTKIFWTHFYIGCLVNKDA
VLQSAAEPKFQVMDVIDHNSMSLKNMQILNQFGQFGACSLDSGHGFWIEFGKDSLSDMNT
VFKKPFVVEMLGGGFEKPSGARYFTLRFPRVQKIFLDRSFEEAASYQELQLSAEEARMVP
AEDLHQEEEWRRQLQQGQVSSHYIVTKSQTTSSGTSSCPMTTSSPSKGPSFEAIATTVIR
TQPQHSSRDSIQQWNRVNEERVPADAIPIFVDDSMTSASSPEPSEPPRKLLRSNDNLSSI
QGSSKKRNQESPSDPSKGNNASYGEENETTFPSNDSNASNELEACIILPLQPRKRRKLTE
NHASNVALVVPSSCSNQHRYVEAPLTMIPLYFRQDLDHDDSTNTLIPPNSSNLAGDIQTF
VQKVCSNRPYPTKSSNSSTGHHDLALGLYIATISQDSLGSLLLELSQQVSTALKSNRHKS
PRSGKIFILDAKFLALKARLDDPRFLLRMTWESIGREYFYACVSWSWETGVEYANDGLSE
IPGTPAAGDGGQRLCLRESVRSQSAARAPRISITFDSRELGVLGDLSA
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcaagtttacctacctgtgtgatttactctcagagttagagcgcaatagagtc
ttgaaggcttctaccgcagcgaaagcctcgaatcctgatcatcgagccgtgacccgatgg
tttgcccagcatgccaaaaggattcatgcttccgacacggatcgaatagctcttttgtca
tgcatatttccagagaaacgaacggacagagtctactggctacggtgtaccaatctttca
agggtcataggccgttgtcttctgttaggttctgatcgacggcaggagctcgagcaatgg
cgcgtcgcgggaggtaccgacttgggacaatgtgtagaaaatgtcatgcgacaagcggaa
ttcgacatcatcagcggccaagaggtgaccgttgaagagatagacctggcattgaacaag
attgcctcgcgatgcaggttctccggttctcgagtgcgaagacaacatagcgcggtcgat
gtcgaggatacgctgagaccattatatcggcgcatgagcagtagagacgcaaaatggctt
actcgaatgatactaaagagttatcatccagtcgtgttgccggccaagctcacgatgaaa
agcttccatttcctgcttccacatttgctgcttttccaggattcttttgattctgctcta
aaaatgcttgcttccgaacccctttgccactacccaccgaacccgattccggagctcgcg
aaagatctgtgtatccaggctttacagcatcttaaacccaggattgggaccaagataggg
cggcccgaatactataaggcgcgaagtatcaaacactgctgccaaatgatcggccgtcgt
cgaatgagtgtagaaaggaagtacgatggcgaatactgccagatacacattgacctcacg
aagcgccccaatcccatccaaattttctccaaaagtggcaaggattctaccgacgacagg
gcgggaatccacgctgtgattaaggactccctgaacatcggtacacccgaatgcaaattc
tctcgccagtgcatcctcgaaggtgaaatacttgtctggagcgacaatcacggcaagatt
gcagattttcataagttgcgcaaattcattgctcgctcaggcacctttattggaatagac
aatgattccccgccgcaaccttacgagcatttaatgattgtgttcttcgacattctgctt
cttgatgacgacatctgccttaggaagccacatcgtgagcggcggctgcttctcaaggat
gttgtaaaagtaatagatggatatgcggacatcgcagagcaacacattgtcgaattctct
catcccgacggtcgatctcgtctcgaaacaatattctcgaaggccgttacggaaaggtgg
gaaggactcgtcctaaaaggttgtgaagatccctacgtttccatgtttcctggttcagag
aacggctccgctggtcgctggatcaagctcaagaaggattatataccagggttgggtgac
accgtggacctggcattaatcggcgctaaatatgactctcgtgatgctgctgcgctgaat
ttatccacaaagatattttggacacacttttacatcggctgtctggtcaacaaagacgcg
gtcttacagtccgcagccgagccaaagtttcaagttatggatgtcattgaccataactcc
atgagcctgaaaaatatgcaaattctcaatcagtttgggcagtttggtgcctgcagtctg
gattcaggccatgggttctggatagagtttggaaaggatagtctctccgatatgaatacc
gtgttcaagaaaccgttcgtggtcgagatgttgggaggtggattcgagaagccatcaggc
gccagatactttacacttcgatttccccgagttcaaaagattttcctggacaggtcattt
gaagaggcagcctcgtaccaagagctccaactatcagctgaagaagctcggatggtacca
gccgaagacttgcatcaagaggaagagtggagaagacagctccagcaaggacaggtgtca
tcgcactatatcgtgaccaagtcacagacgacatcctctgggacaagctcgtgtccgatg
accacatctagcccgagcaagggaccgtcgttcgaagctatcgccacgactgttatacga
acccaaccgcaacattcatcgagggactccatccagcaatggaatcgcgtcaacgaggag
cgtgtaccagcagatgctattcccattttcgtggatgattctatgacatcagcatcgtca
ccggaaccatctgagccgcctcgaaagcttctgagaagcaacgacaatctatcatcaatt
caaggaagtagtaaaaaacggaaccaggagtctccctccgacccgtccaaaggtaacaat
gctagttatggcgaggagaatgaaacaacgtttccatcgaatgactcaaatgcctcaaat
gagttggaagcctgcataattttacctttgcaaccgagaaagcgtcgaaagctcaccgag
aatcacgcttctaatgttgctcttgtcgttcctagctcttgcagcaaccaacatcgatac
gtcgaggcaccactgacaatgattccattatacttccgacaggacttggatcatgatgac
tctaccaacaccttaatccctcccaactcatccaatctcgctggagatatccagaccttc
gtacagaaagtatgctcaaacagaccatatcctaccaagagctctaattcaagtacggga
caccatgaccttgccctgggcttgtatatagcaacaatatcgcaagactctctcgggagc
cttcttctcgaactcagccaacaggtctcaacagccctcaaatccaacagacataaatct
ccacgaagcggcaagattttcatccttgatgccaaattcctcgctctcaaggcaagacta
gacgaccccagatttcttcttcgcatgacatgggagagtatcgggagagaatacttctac
gcctgcgtatcgtggagctgggagacgggagttgagtacgcgaatgacggtctttcggag
ataccggggaccccagcggctggtgacggaggtcaacggttatgtctacgcgagtcggtc
agatcacagagtgctgcgagggcaccgcgtatttctataacgtttgacagccgcgaattg
ggggttttgggagatttgagtgcctag
DBGET
integrated database retrieval system
