Aspergillus fischeri: NFIA_096690
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Entry
NFIA_096690 CDS
T01070
Name
(RefSeq) U5 snRNP component (116 kDa), putative
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
nfi
Aspergillus fischeri
Pathway
nfi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NFIA_096690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfi03041
]
NFIA_096690
Spliceosome [BR:
nfi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
NFIA_096690
Complex C
U5 SnRNP specific factors
NFIA_096690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFL1
SRPRB
Ras
Motif
Other DBs
NCBI-GeneID:
4588651
NCBI-ProteinID:
XP_001261944
UniProt:
A1DB07
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MEDLYDEFGNYIGEPADSDEENQDEELKPQTFAFDEAFGEEEDENQNADQLMEVDEGPSN
AVVLHEDKQYYPSAKQVYGDEVETLVQEEDSQPLSQPIIAPVQQKKFAIEEAELPPVHFS
REFMTDLLSFPSQIRNIALVGHLHHGKTAFMDMLVTQTHDLTERLEKRVGKRKEEQLRYT
DIHFLERERGLSIKSAPMTLVLQNTKGKSHLFNIIDTPGHVNFVDEVATSSRLVDGIVLV
VDVVEGVQANTEQIIKHAVLEGLPITMVVNKMDRLILELKIPPNDAYFKLKHVVEEVNTI
IERILPGQGERYRLSPEKGNVAFACASMEWCFTLQSFAKMYAETYPQVETSDFALRLWGD
IFFNPGSRKFTRKGVEENSKRTFVQFVLEPIYKLYSHTISESPDDLKETLAGVGINLKPS
QLKSDARVLLNMVCHEFFGPATGFVDMIVQHIPSPVEGAQRTLDRYYTGPLDTKVAAAMA
ACDPDGPLVVHVTKLFTSTDATKFHAFGRVMSGTARPGQPVRVLGEGYTPEDEEDMVTAT
ISDTWIAETCYSIPTSGVPAGNLVLLGGVDNSIVKTATIVPLRLEDGEEAYIFRPIRHIT
ESVFKVAVEPVNPSELPKMLDGLRKINKSYPLISTKVEESGEHVVLGTGELYMDCVLHDL
RRLYSEMEIKVSDPVTRFCETVVETSAIMCYSITPNKKNKITMIAEPLDDGIAEDIESGR
VSIKDPIRKVARFFEDKYDWDKLAARSIWAFGPDEMGPNILQDDTLPSQVDKKLLGNVRD
SITQGFSWGTREGPLCEEPIRNAKFRLTDVSLADQAIYRGGGQIIPTARRAVYSSFLMAS
PRLMEPIYSCTMTGPADAVASVYTVLSRRRGHVLSDGPIAGTPLYTVQGLIPVIDSFGFE
TDLRIHTQGQAAVSLVFDRWSVVPGDPLDREVKTKPLEMAPAMATARDFVLKTRRRKGLA
EDVTVSKFLEPELWKGLKESGVLDS
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggaggatctttatgatgagttcggcaattacattggagagcctgcggactctgacgag
gaaaaccaagatgaagagctcaagccgcagacatttgctttcgacgaagcatttggagag
gaagaagatgaaaaccagaatgcagatcaattgatggaggttgacgaaggcccttcgaat
gcggtcgtcctacatgaagacaaacaatattatcctagtgcaaagcaagtctacggtgac
gaggttgagaccttggtccaagaggaggactcgcagccactttcgcaacccataatcgct
cccgtccagcagaagaagtttgcgatcgaggaggccgagctgccacccgttcatttctcg
cgagagtttatgacagacttgctcagttttcctagtcaaataaggaacatcgcgctcgtt
ggccatcttcaccatgggaaaacagcgtttatggacatgcttgtgacgcagacacatgat
ttgacagagcgtctggagaagcgagtaggcaagcggaaggaggaacagctccgctatacc
gatattcacttcttagagcgagagcggggtctctctataaagtcggcacctatgacttta
gtactccaaaacaccaaaggaaaatctcatcttttcaatatcattgacactcccggccat
gtgaatttcgtggacgaggtggccacatcgtctcggctcgtcgacggaatagtgctggtc
gtggatgtcgtcgaaggagtgcaagcgaacacggaacagatcattaagcacgccgtgctg
gaaggtcttcccataacgatggtcgtgaacaagatggaccggctgattttggagttgaag
attccgccgaatgatgcttacttcaagttaaagcacgtggtcgaagaggtaaacactatt
atcgagaggattctgcccgggcaaggggaaaggtatcggctgagccctgaaaagggtaac
gttgcctttgcatgtgcctctatggaatggtgttttaccctacaatctttcgccaaaatg
tatgccgaaacttatccccaagtcgaaacgtctgactttgccttacgtctttggggggat
attttcttcaacccaggaagccgaaagtttactcgaaaaggagtggaagagaattccaaa
cggacattcgtccaattcgtcctggagcctatttataaactctactctcacaccataagt
gaaagtccagatgacctgaaagaaacgcttgcaggtgtgggtatcaacttgaagccgtcg
caactcaagtcagatgcgagggtgctactcaacatggtctgccatgaattctttggtcct
gccactggctttgtggacatgatcgtacagcatattccctccccagtagaaggagcccaa
agaacactcgacaggtactataccggcccccttgatacgaaagttgcagccgccatggca
gcctgtgacccggacgggccgcttgtcgtccatgtcacaaagctctttaccagcacggat
gctaccaagttccatgcgtttggaagagtcatgagcgggacggcgcgccctggtcaaccg
gtcagagtgttgggcgagggctatacacctgaggatgaggaagacatggtcacagcgact
atatcggatacatggattgcagaaacctgctatagcatcccaaccagtggtgttcctgcg
ggaaacttggttctgttaggtggtgtggacaattccatcgtcaagactgccacaattgtc
cccttgaggctggaagatggcgaggaagcatacatcttcagacctattcgacacattaca
gagtctgttttcaaggttgctgttgagccggttaacccatcagaacttcccaaaatgctt
gacgggctgcggaagattaataaaagctaccctctcatctcaacgaaagtagaagagtcc
ggtgagcatgtggtcttaggaaccggagagctttacatggattgtgtgctccacgatctt
cgaagactttattcggagatggagattaaggtgtccgaccctgtcacccgtttctgcgaa
actgtcgttgagacttcggctatcatgtgctattctatcacgccaaataagaagaataag
attaccatgattgcggagcccttggatgatgggattgccgaagacatcgagagcggcaga
gtcagtatcaaagatccaatccgcaaagtagcgaggttctttgaagacaaatacgattgg
gacaagctcgcagctagaagtatctgggctttcggccctgacgagatgggccccaatatt
ctacaagacgacacgctaccgtcgcaagtggacaagaagctacttgggaatgtcagggat
tccatcacacaaggtttcagctggggcacacgggaaggccctctttgcgaggaaccaata
cgaaacgcgaagttcaggctcacagatgtatctcttgctgaccaggccatttacagggga
ggtggtcagataatccctacggcccgacgtgccgtttactcctccttcctcatggcatca
cctcgcttgatggaacccatatattcttgcaccatgacagggcctgcggatgctgtggct
tcggtatatacagtgctctcacgcagaaggggccatgttctgtcagacgggccaattgct
gggacaccactgtatacagtgcaaggcttgattcccgttattgactctttcgggttcgaa
acggatctcagaattcatactcaaggtcaagctgcggtcagtcttgtgttcgatcgatgg
agcgtcgttccaggcgatccgctggatcgcgaagtcaagacaaagccactcgagatggcg
cccgcgatggccacagcgagggattttgtattgaaaacaaggagacggaaaggtttggca
gaagatgtgacagtgagtaaatttctggaaccggagctctggaaaggcctgaaggaaagt
ggcgttttggattcatga
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