Nocardia farcinica NCTC11134: ERS450000_02814
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Entry
ERS450000_02814 CDS
T04524
Symbol
gdhB_2
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr00220
Arginine biosynthesis
nfr00250
Alanine, aspartate and glutamate metabolism
nfr00430
Taurine and hypotaurine metabolism
nfr00910
Nitrogen metabolism
nfr01100
Metabolic pathways
nfr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
ERS450000_02814 (gdhB_2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
ERS450000_02814 (gdhB_2)
00220 Arginine biosynthesis
ERS450000_02814 (gdhB_2)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
ERS450000_02814 (gdhB_2)
Enzymes [BR:
nfr01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
ERS450000_02814 (gdhB_2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_HM3
GDH_ACT2
GDH_ACT3
GDH_HM1
GDH_HM2
Motif
Other DBs
NCBI-ProteinID:
CRY78219
UniProt:
A0A0H5NT47
LinkDB
All DBs
Position
1:complement(2873344..2878242)
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AA seq
1632 aa
AA seq
DB search
MTVSSELSGAAWAAGLPQSLRDGLATLERAYFRHVDADDVDSAVTGVSQIFRRHLELGGT
RSPGRARIRVYHPDDECGLGAAVQVVTDDMPLLVESVTASLNRQGASVREVIHPIFEVDR
DDDGRLLAAAPHEVDGKPAGTLRESWMHVQLHPSTDRAVLERIEQSLAAVVEDVRQVIGD
REAIERAQSRLADELDRLAAAPEPPFPVEDLADTAALLRWLAGGHFTVLGFARYRIHSVG
GHTVSEPVEGTCLGVLRPDVGTDFRVPVNGIDRPLLMLTQGLVPATVHRSVYPYFVGVAD
VDAAGTIVGEHLFIGVFTVTAVHENVLDIPVIQRRVRTAIEKSGFDLESYSGQAMLEVIQ
SFPRTELFSADAETMRRTAEAVLNVGLRRQVRLFLRADTYGRFVACLVYLPRDRYTTQVR
LRMQDILVRELDGESIDYSARVSESELASVYFTVRMRDTHTGGPDRAAILSYTADENRRR
IERLLAEASHTWADHLNDEVNASSMLDPAVVQRYAGAFPEAYKQDFSPNRALRDIARLER
LAAGAIDQHLYRSPDAEPGSWRFTLYIGGAGISLSQVLPLLQSLGVEVVDERPYRVALDA
ECWIYDFGLLARPDLLRTALDRDLDAELLESVTADTGHGLRDRFTEAFAAMWYGRAEADG
LNELVLRARLSWRAVSMLRTYAKYLQQAGFPYSQTNIARVLLAYPDIAGLLVDLFAARFD
PDTVSAERATELEAAVRERIDRVVSLDADRILRAILGLIKATLRTNYYMLDDAGVSRDYV
SIKVEPREIAELPKPKPQFEIFVYSPRVEGVHLRFGPVARGGLRWSDRLEDFRTEILGLV
KAQAVKNAVIVPVGAKGGFVVKQPPQSTGDPAADRQALSAEGVACYRTFISGLLDLTDNV
DLASGAVVPPARVVRRDGDDTYLVVAADKGTATFSDIANDVARSYGFWLGDAFASGGSAG
YDHKAMGITARGAWESVKRHFREMGIDTQSEDFTVVGIGDMSGDVFGNGMLLSEHIRLVA
AFDHRHIFLDPDPDAARSYRERQRLFALPRSSWADYDTSLISAGGGVWDRTVKSVPISPQ
ARAALGLPDDVVSLAPPELVRAILLAPVQLLWNGGIGTYIKATDETNAEVGDKSNDPVRV
NGKDLRVRVIGEGGNLGATARGRIEFCRNGGKMNTDALDNSAGVDCSDHEVNIKVLLDGV
VSAGLLPAAERNPLLASMTDEVADMVLRDNVSQNFLMGISRFEAPRMTNVNMRLITDLEQ
RRGLDRELEALPSNAELKRRRDNGEGLVSPELANLMAHVKLSLKADLLDSDLPDQGYFAA
RLPEYFPTPLRTRFGGAIKKHRLRREIVTTMIVNEMVDYGGISYAFRLNEESGASTTDAV
RAFAAAGAIFDLPAMWERIRSADIPVVVRDELELETKRTLDRASRWLLNNRPQPIAVGAE
INRYADGVRELAPKVPTWLRGHHVATLTDQSAELVARGAPLELATEVFGLLNLFPLLDIL
DIADITDRDGDEVGALYYALNDHLKIDWLLQAVTHLERGDRWHALARLAVRDDMYGSLRS
LTLDVLSAGDPEETADEKIAYWESKNQSRLGRARAALAELFESGAHDLASLSVASRQVRS
MVSGVGAQSPGA
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atgacggtctcgtccgagttgtccggtgcggcgtgggccgcgggtttgccacagtcgctg
cgcgacggtctggcaaccctcgaacgggcgtatttccgccacgtcgacgcggacgatgtg
gactctgcggtcaccggggtctcgcagatcttccgcaggcatctcgagctcgggggcacc
cggtcgccgggccgggcccgcatccgcgtgtaccaccccgacgacgagtgcggtctcggc
gccgccgtgcaggtggtcaccgacgacatgccgctgctcgtcgagtcggtcaccgcgtcg
ttgaaccgtcagggcgccagtgtgcgcgaggtgatccacccgatcttcgaggtcgaccgc
gacgacgacgggcggttgctggcggccgctccgcacgaggtggacggcaaaccggcgggc
acactgcgcgaatcgtggatgcacgtccagctacacccctccaccgatcgggcggtgttg
gagcggatcgagcagtcgctggccgccgtggtcgaggacgtgcgccaggtgatcggtgat
cgcgaggcgatcgaacgcgcgcagagcaggctggccgacgagctggaccggctggccgcc
gcgccggagccgccgttccccgtcgaggatctcgccgacaccgccgcgctgctgcgttgg
ctggccggcgggcacttcacggtgctcggcttcgcccgctaccgcatccactcggtcggc
gggcacacggtgtccgaaccggtggagggcacctgcctcggggtgttgcggcccgatgtg
ggcaccgatttccgggtcccggtcaacggcatcgaccggccgctgctgatgctcacccag
ggtctggtgcccgcgaccgtgcaccgctcggtctacccgtacttcgtcggggtcgccgat
gtcgacgccgcgggcacgatcgtcggcgagcacctgttcatcggcgtgttcaccgtgacc
gcggtgcacgagaacgtgctcgacatcccggtgatccagcgccgggtgcgcaccgccatc
gagaagagcgggttcgacctggagtcctattccgggcaggccatgctcgaggtgatccag
tccttcccgcgcaccgaactgttctccgccgacgccgagaccatgcggcgcacggccgag
gcggtgctcaacgtcggcctgcgccgacaggtgcggctgttcctgcgcgcggacacctac
ggccggttcgtcgcctgcctggtgtacctgccgcgcgatcgctacaccacgcaggtgcgc
ctgcggatgcaggacatcctggtccgcgaactcgacggcgaatccatcgactattccgcc
agggtgagcgaaagcgagctcgccagtgtgtatttcaccgtgcggatgcgcgacacccac
accggcggcccggaccgggcggcgatcctgtcctacaccgccgacgagaaccgcagacgt
atcgagcgcctgctggccgaggcgagccacacctgggccgaccacctcaacgacgaggtc
aacgccagctcgatgctcgatccggcggtcgtgcagcgctacgcgggcgccttcccggag
gcctacaagcaggacttcagcccgaaccgcgcgctgcgcgacatcgcccggctggaacgg
ctcgccgccggtgccatcgaccagcatctctatcgcagcccggacgccgagcccggctcc
tggcggttcaccctctacatcggcggcgcgggcatttcgctgagccaggtgctgccgctg
ctgcagagcctgggcgtcgaggtggtcgacgagcggccctaccgggtggcgctggacgcc
gagtgctggatctacgatttcggcctgctggcccgcccggacctgctgcgcaccgcgctc
gaccgtgatctggacgccgagctgctggagtcggtcaccgccgacaccgggcacggcctg
cgcgaccggttcaccgaggccttcgcggcgatgtggtacgggcgcgccgaggccgacggg
ctcaacgagctggtgctgcgggcccggctgtcgtggcgtgcggtctcgatgctgcgcacc
tacgcgaagtacttgcaacaggccggttttccgtacagccagaccaacatcgcgcgcgtg
ctgctggcctacccggacatcgccgggctgctggtggacctgttcgcggcccgcttcgac
cccgacaccgtctccgccgaacgcgccaccgagctggaggccgcggtgcgcgaacgcatc
gaccgcgtggtcagcctggacgccgaccgcatcctgcgcgccatcctcggcctgatcaaa
gccaccctgcgcaccaactactacatgctcgacgacgcgggcgtgtcgcgcgactacgtc
tcgatcaaggtggagccgcgcgagatcgccgaattgcccaagcccaaaccgcaattcgag
atcttcgtgtactcgccccgggtggagggcgtgcacctgcgcttcgggccggtcgcgcgc
ggcggcctgcgctggtcggaccggctggaagacttccggaccgagatcctcggcctggtg
aaggcgcaggcggtgaagaacgcggtcatcgtgccggtgggcgcgaagggcgggttcgtg
gtcaagcagccgccgcagagcaccggcgacccggccgccgaccggcaggcgctctccgcc
gagggcgtggcctgctatcgcacgttcatctccggcctgctcgacctcaccgacaacgtc
gatctggccagcggcgcggtggtgccgcccgcccgggtggtgcgccgcgacggcgacgac
acctacctggtggtggccgccgacaagggcaccgcgaccttctccgacatcgccaacgac
gtggcccgcagctacggcttctggctcggcgacgccttcgcctccggcgggtcggcgggc
tacgaccacaaggcgatgggcatcaccgcgcggggcgcgtgggagagcgtcaagcggcac
ttccgcgaaatgggcatcgacacccagagcgaggacttcaccgtcgtcggcatcggtgac
atgagcggcgacgtgttcggcaacggcatgctgctctccgagcacatccggctggtcgcc
gcgttcgaccaccggcacatcttcctcgaccccgaccccgatgccgcccggtcctaccgg
gagcggcagcgcctgttcgcgctgccgcgctcgtcctgggccgactacgacacctcgctg
atcagcgcgggcggcggcgtgtgggatcggacggtgaaatcggtgccgatcagcccgcag
gccagggccgcgctcggcctgcccgacgacgtggtctcgctcgcgccgccggaactggtg
cgcgcgatcctgctggcgccggtgcaactgctgtggaacggcggtatcggcacctacatc
aaggccaccgacgagaccaacgccgaggtcggcgacaagtccaacgacccggtgcgggtg
aacggaaaagacctgcgggtccgggtgatcggtgagggcggcaacctcggcgccaccgcg
cgcggacgtatcgagttctgccgcaacggcggcaagatgaacaccgacgcgctggacaac
tccgcgggcgtggactgctccgatcacgaggtcaacatcaaggtgctgctcgacggtgtg
gtcagcgcgggactgctgcccgcggccgaacgcaacccgctgctggcctcgatgaccgac
gaggtcgcggacatggtgttgcgcgacaacgtgtcccagaacttcctgatgggcatctcg
cggttcgaggcgccgcggatgacgaatgtgaacatgcgcctgatcaccgacctcgagcag
cgtcgcggcctggaccgcgagctggaggcgctgccgtcgaacgcggagctgaagcgccgc
cgcgacaacggcgaagggctggtctccccggagctggccaatctcatggcgcacgtgaag
ctctcgctcaaggccgacctgctcgactccgatctgccggatcaggggtatttcgcggcg
cggctgccggagtacttcccgacgccgctgcgcacccggttcggcggtgccatcaagaag
caccggctgcgccgcgagatcgtcaccacgatgatcgtcaacgagatggtcgactacggc
ggcatcagctacgccttccggctcaacgaggagagcggcgcgagcaccaccgacgcggtg
cgcgccttcgccgcggccggtgcgatcttcgatctgcccgccatgtgggagcgcatccgc
tcggccgacatcccggtggtggtgcgcgacgagctcgaactcgagaccaagcgcacactg
gaccgggcctcgcggtggctgctcaacaaccggccccagccgatcgcggtcggcgcggag
atcaaccgctatgccgacggcgtgcgcgaactcgcaccgaaggtgccgacctggctgcgc
ggccatcatgtggccacgctcaccgaccagtcggccgagctcgtcgcgcgcggggcgccg
ctggagctggccaccgaggtgttcggcctgctgaatctgttcccgctgctggacattctc
gacatcgccgacatcaccgaccgggacggcgacgaggtgggcgcgctgtactacgcgctc
aacgatcacctcaagatcgattggctgctgcaggcggtgacccatctcgagcgcggcgac
cgctggcacgcgctggccaggctcgcggtgcgcgacgacatgtacggctcgttgcgctcg
ctgaccctggacgtgctctccgccggcgatccggaggagaccgccgacgagaagatcgcc
tactgggagtcgaagaaccagtccaggctgggccgggcgcgcgcggcgctggccgagctg
ttcgaatccggcgcgcacgatctggccagtctgtcggtggcctcgcggcaggtgcgcagc
atggtcagcggtgtgggagcgcagtcaccgggcgcctga
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