Nonomuraea fuscirosea: OIE67_00930
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Entry
OIE67_00930 CDS
T09742
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nfs
Nonomuraea fuscirosea
Pathway
nfs03030
DNA replication
nfs03410
Base excision repair
nfs03420
Nucleotide excision repair
nfs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OIE67_00930 (ligA)
03410 Base excision repair
OIE67_00930 (ligA)
03420 Nucleotide excision repair
OIE67_00930 (ligA)
03430 Mismatch repair
OIE67_00930 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfs03032
]
OIE67_00930 (ligA)
03400 DNA repair and recombination proteins [BR:
nfs03400
]
OIE67_00930 (ligA)
Enzymes [BR:
nfs01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
OIE67_00930 (ligA)
DNA replication proteins [BR:
nfs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OIE67_00930 (ligA)
DNA repair and recombination proteins [BR:
nfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
OIE67_00930 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OIE67_00930 (ligA)
MMR (mismatch excision repair)
DNA ligase
OIE67_00930 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OIE67_00930 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
Nlig-Ia
HHH
BRCT_2
HHH_8
DUF7409
Motif
Other DBs
NCBI-ProteinID:
WSA53235
LinkDB
All DBs
Position
208606..210795
Genome browser
AA seq
729 aa
AA seq
DB search
MSESGAEVGGVPVAALKRHAELSELVEDARWRYYVLDQPTVSDAQFDGWFKELLALEEAH
PALQTPDSPTQKVGAPVSGDFAKVAHLNRMESLDNAFNADDMSAWMTRAERLAEGDPGPY
LCELKIDGLAIALVYRDGRLERGATRGDGRTGDDVTANVRTIKGIPHRLTGDDVPSLVEV
RGEVYIPVEDFARLNEQLVEQGKPPFANPRNSAAGTLRQKDPRVTAQRPLRMLVHGIGVW
EGAAEPRAQSEVYERLREFGLPVSDLTKVVAGLDEVNAFIEHYRVHRHDPPYEIDGVVVK
VDDFRTQRELGSTSRAPRWAIAYKYPPEEVNTKLLDIQVGVGRTGRVTPFGVMEPVVVSG
STVERATLHNAAIVVKKGVLIGDTVVLRKAGDVIPEIVGPVAALRDGSEREFVMPTHCPE
CGTELAYEKEGDADLRCPNARGCPAQIRERIFFAAGRRALDIDGLGYVAATALTQPLPPQ
QPVVRTEADLFDLTLEQLIPIRSVVRDQDTGLPKIDPKTGEEKVVTFFSNLNGEASQNAL
RLMEELERAKQVPLAQILVALSIRHVGPPTARALADAMRSIDAVMNASEEELAAVEGIGP
RVAATIKEWFEVDWHREIIERWRAAGVRMEDEPAPEKGPQTLEGMTFVVTGTLEGYTRDT
AADALTSRGGKVSGSVSKKTSFLVAGENAGSKYDKAVSLGVPILDEAGFEVLLNEGPEAA
AGVAVTPEP
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagtctggtgcggaggtcgggggcgtgccggtggccgcgctcaagcggcacgcc
gagctgagcgagctggtcgaggacgcgcgctggcgctactacgtgctcgaccagcccacg
gtcagcgacgcccagttcgacggctggttcaaggagctgctggcgctggaggaggcgcat
ccggcgctccagacgcccgactcgcccacgcagaaggtgggcgcgccggtctcgggcgat
ttcgccaaggtcgcgcacctcaaccggatggagagcctcgacaacgccttcaacgccgac
gacatgtcggcctggatgacgcgggccgagcggctggccgagggcgacccagggccgtac
ctgtgcgagctgaagatcgacgggctggcgatcgcgctggtctaccgggacggcaggctg
gagcgcggcgcgacccgcggcgacgggcgcaccggtgacgacgtgaccgccaacgtgcgc
acgatcaagggcatcccgcaccggctcacgggcgacgacgtcccgagcctggtcgaggtg
cgcggcgaggtctacatcccggtcgaggacttcgcccggctcaacgagcagctggtcgag
cagggcaagccgccgttcgccaacccgcgcaactcggcggcgggcacgctgcggcagaag
gacccgcgcgtcacggcgcagcggccgctgcgcatgctggtgcacggcatcggcgtctgg
gagggcgcggccgagccgcgggcgcagtcggaggtctacgagcggctgcgcgagttcggg
ctgccggtcagcgacctgaccaaggtggtggccgggctcgacgaggtcaacgcgttcatc
gagcactaccgggtgcaccggcacgatccgccgtacgagatcgacggggtcgtggtgaag
gtcgacgacttccgcacgcagcgggagctgggctcgacctcgcgggcgccgcgctgggcc
atcgcgtacaagtatccgccggaggaggtcaacaccaagctgctcgacatccaggtgggc
gtcgggcgcacggggcgggtcacgccgttcggggtgatggagccggtcgtggtgtcgggc
tcgaccgtcgagcgggccacgctgcacaacgcggccatcgtggtgaagaagggcgtgctc
atcggtgacacggtggtgctgcgcaaggcgggcgacgtcatccccgagatcgtcgggccg
gtcgccgcgctgcgcgacggatccgagcgggagttcgtcatgcccacccactgtcccgag
tgcggcacggagctggcgtacgagaaggagggcgacgccgacctgcgctgccccaacgcg
cgcggctgcccggcgcagatccgggagcggatcttcttcgcggccgggaggcgggcgctc
gacatcgacgggctcggctacgtcgcggccacggcgctcacccagccgctgccgccgcag
cagccggtggtgcgcaccgaggccgacctgttcgacctgacgctggagcagctcatcccg
atcaggtcggtggtccgcgaccaggacaccggcctgcccaagatcgacccgaagacgggc
gaggagaaggtcgtcaccttcttctccaacctcaacggcgaggccagccagaacgccctg
cggctgatggaggagctggagcgggccaagcaggtgccgctcgcgcagatcctggtggcg
ctgtcgatccggcacgtcggcccgcccacggcgcgcgccctggccgacgccatgcggtcg
atcgacgccgtcatgaacgcctccgaggaggagctggccgcggtcgagggcatcgggccc
agggtggcggccacgatcaaggagtggttcgaggtcgactggcaccgcgagatcatcgaa
cgctggcgggccgccggagtccgcatggaggacgagcccgctcccgagaaggggccgcag
acccttgaggggatgacgttcgtggtgaccggcaccctggagggctacacgcgcgacacg
gccgccgacgcgctcaccagcaggggcggcaaggtgtccgggtcggtgtcgaagaagacg
tcgttcctggtggcgggggagaacgcggggtcgaagtacgacaaggcggtcagtctgggg
gtgccgatcctcgacgaggccgggttcgaggtcctgctcaacgaggggccggaggccgcg
gcgggcgtggcggtcacaccggagccctag
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