Nonomuraea fuscirosea: OIE67_52515
Help
Entry
OIE67_52515 CDS
T09742
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nfs
Nonomuraea fuscirosea
Pathway
nfs03030
DNA replication
nfs03410
Base excision repair
nfs03420
Nucleotide excision repair
nfs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OIE67_52515 (ligA)
03410 Base excision repair
OIE67_52515 (ligA)
03420 Nucleotide excision repair
OIE67_52515 (ligA)
03430 Mismatch repair
OIE67_52515 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfs03032
]
OIE67_52515 (ligA)
03400 DNA repair and recombination proteins [BR:
nfs03400
]
OIE67_52515 (ligA)
Enzymes [BR:
nfs01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
OIE67_52515 (ligA)
DNA replication proteins [BR:
nfs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OIE67_52515 (ligA)
DNA repair and recombination proteins [BR:
nfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
OIE67_52515 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OIE67_52515 (ligA)
MMR (mismatch excision repair)
DNA ligase
OIE67_52515 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OIE67_52515 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
BRCT
HHH_2
HHH_5
PTCB-BRCT
BRCT_2
CwsA
Motif
Other DBs
NCBI-ProteinID:
WSA52549
LinkDB
All DBs
Position
complement(11361948..11364035)
Genome browser
AA seq
695 aa
AA seq
DB search
MTETPPITTLADDTAYAEAVQLAVDSAAAYYADGTSTLDDDAYDRLVRGIQAYEEEHPES
VLPSSPTGKVAGGAVVGDVPHTVPMLSLDNVFGAEQLADWAAGLERRLGRPVTVWSVEPK
LDGLAISARYRHGRLAQLVTRGDGTAGEDVSHAIGTIVGLPDRLADAVTVELRGEVMMTA
SQFEDACAKRQAHDGTTFANPRSAAAGTLRAQDRPYVCELTFFGYGVLPSPGDDSELATR
LRGLPHSEVMEWVATQGVQTTAVTPVAGIVAETLERVQERVGEIAGLRATLPFGIDGIVI
KCDLATDQAEAGFSSRAPRWAIAYKLPATEKITKLLRVEWNTGRTGIIAPRAVLEPVELD
GSTVTYATLHNVADITRRGLMLGDSVTVYKAGDVIPRVEAPVVHLRTGDEQPIAIPQVCP
SCGDAIDTSQERWRCVRGRGCRAIASITYAVGRDTLDIEGLAENRIQQMLDTGLIADFAD
LFFLTKEQLLGLERMGETSSDNLIAAIEQAKSRPLSRVFAALGVRGTGRSMSRRVARHFA
TMDAIRASDAEAIQQVQGMGPEKAPVVVDELIELAPLIDKLVRAGVNMTEPGATPPSAEP
QEPSADLPLVSMSVVVTGTMTGPLAQLSRNEVNELIERAGGKASSSVSAKTSLLVAGEKA
GSKRTKAESLGVRIVSPEEFAEQVNAFLSTDNVSA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagacaccccccatcaccaccctggctgacgacacggcctacgccgaggccgtt
cagctggccgtcgactcggccgccgcctactacgcggacggcacctcgaccctcgacgac
gacgcctacgaccggctggtccgcggcatccaggcgtacgaggaggagcatcccgagtcg
gtgctgccgtcgtcgccgaccggcaaggtggccggcggggccgtggtgggcgacgtgccg
cacaccgtgcccatgctgagcctggacaacgtgttcggcgccgagcagctggccgactgg
gcggcggggctggagcgccggctcggccggcccgtcacggtgtggagcgtggagccgaag
ctcgacggcctggccatctcggcccgctaccggcacggccgcctggcccaactggtcact
cgcggtgacggcaccgccggcgaggacgtctcgcacgccatcggcaccatcgtcggcctc
cccgaccggctggccgacgcggtcacggtggagctgcgcggcgaggtgatgatgaccgcg
tcgcagttcgaggacgcgtgcgccaagcggcaggcgcacgacggcaccacgttcgccaat
ccgcgcagcgccgccgccggcacgctgcgcgcgcaggaccggccttacgtgtgcgagctg
accttcttcggctacggcgtgctgccgtcgcccggcgacgactccgagctggccacccgg
ctgcgcgggctaccgcacagcgaggtcatggagtgggtggccacgcagggcgtgcagacg
acggccgtcacgccggtggcgggcatcgtggccgagacgctggagcgggtgcaggagcgc
gtcggggagatcgccggcctgcgggccacgctgccgttcggcatcgacggcatcgtgatc
aagtgcgacctcgcgaccgaccaggccgaggccgggttcagctcccgcgcgccccgctgg
gccatcgcctacaagctgcccgccaccgagaagatcaccaaactgctccgcgtggagtgg
aacaccggccgcaccggcatcatcgcgccgcgcgccgtgctggagccggtcgagctcgac
ggcagcaccgtcacctacgccactctccacaacgtcgccgacatcacccggcgcggcctg
atgctcggcgacagcgtgaccgtctacaaggccggcgacgtgatcccgcgggtcgaggcg
ccggtggtgcacctgcgcacgggcgacgagcagccgatcgcgatcccgcaggtctgcccg
tcctgcggcgacgccatcgacacctcccaggagcggtggcggtgcgtgcgcgggcgcggc
tgccgggcgatcgcgtccatcacctacgcggtcggccgcgacaccctcgacatcgagggt
ctggccgaaaaccgcatccagcagatgctcgacaccggcctgatcgccgacttcgccgac
ctgttcttcctgaccaaggagcagctgctcgggctggagcgcatgggcgagaccagcagc
gacaacctgatcgcggccatcgagcaggccaagtcccgcccgctcagcagggtgttcgcc
gcgctcggggtgcgcggcacgggccgttcgatgagccgccgcgtcgcccgccacttcgcc
accatggacgccatccgggcctccgacgccgaggcgatccagcaggtgcagggcatgggc
ccggagaaggcaccggtcgtggtggacgagctgatcgagctcgcgccgctcatcgacaag
ctggtccgagccggcgtcaacatgaccgaacccggcgccaccccgccctcggccgagccc
caggagccatcggccgacctccccctggtctcgatgtcggtggtcgtcaccggcaccatg
accggccccctggcccagctctcccgcaacgaggtcaacgagctgatcgagcgagccggc
ggcaaggccagctccagcgtctcggcgaagacgtccctgctggtggccggcgagaaggcc
ggctccaagcgtacgaaggcggagagcctgggggtgcgcatcgtcagcccggaggagttc
gcggagcaggtgaacgccttcttgtcgaccgacaacgtcagcgcttaa
DBGET
integrated database retrieval system
