KEGG   Nothobranchius furzeri (turquoise killifish): 107374323
Entry
107374323         CDS       T05163                                 
Symbol
traf2
Name
(RefSeq) TNF receptor-associated factor 2
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04010  MAPK signaling pathway
nfu04137  Mitophagy - animal
nfu04141  Protein processing in endoplasmic reticulum
nfu04210  Apoptosis
nfu04217  Necroptosis
nfu04621  NOD-like receptor signaling pathway
nfu04622  RIG-I-like receptor signaling pathway
nfu04920  Adipocytokine signaling pathway
nfu05132  Salmonella infection
nfu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107374323 (traf2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    107374323 (traf2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    107374323 (traf2)
  09143 Cell growth and death
   04210 Apoptosis
    107374323 (traf2)
   04217 Necroptosis
    107374323 (traf2)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    107374323 (traf2)
   04622 RIG-I-like receptor signaling pathway
    107374323 (traf2)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    107374323 (traf2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    107374323 (traf2)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    107374323 (traf2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nfu03019]
    107374323 (traf2)
   04121 Ubiquitin system [BR:nfu04121]
    107374323 (traf2)
Enzymes [BR:nfu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107374323 (traf2)
Messenger RNA biogenesis [BR:nfu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     107374323 (traf2)
Ubiquitin system [BR:nfu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    107374323 (traf2)
SSDB
Motif
Pfam: TRAF-mep_MATH TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_4 zf-RING_5 zf-C3HC4_2 zf-C3HC4_3 Sina_ZnF zf-RING_2 zf-RING_6 zf-RING_UBOX Vps23_core ATG16 Paramyxo_NS_C zf-C3HC4_5
Other DBs
NCBI-GeneID: 107374323
NCBI-ProteinID: XP_015797961
UniProt: A0A1A8U3D6
LinkDB
Position
sgr02:54930834..54953005
AA seq 516 aa
MARISLDCPSSLPGIPLSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCVHCFKQLTSS
GPKPCEACRQEEIYEEPTSILNSNEAFPDNAAGREIASLPARCLNQGCSWTGSIKEYEAQ
HEGRCEYERVQCEACQASILLKDKDRHNEKECEERTLNCKYCKVTSNFKDIKAHDEICLK
FPLQCKECGKKKIQREKFNDHLKSCVKSKSACPFSDVGCKSVIENGKLSDHEHSSTMEHL
RLLLPRVLSLTRTHAEAPESGEWQEDSGFGLYRAPEEGSGAAASNQSLDLDKKVNALENI
VCVLNREVERSSITLEAFSHQHRLDQEKIENLSNRVRQLERTLTMRDLQISETEQLLREL
QHCTYDGVFVWKITDFSRRRQEAMAGRSPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGT
HLSLFFVVMRGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDITSTSFQRPISEMNI
ASGCPLFCPLAKLAGKSAYLRDDTIFIKAIVDLTGL
NT seq 1551 nt   +upstreamnt  +downstreamnt
atggctcgcatctctttggactgcccaagctccttaccagggatccccctcagtgtgctg
tcagttcccatggaaaataaatacaaatgtcagcagtgtctccaggtcctgaggaagcct
gttcaggctcaatgcggacatcgcttttgtgtacattgctttaagcagctcaccagctca
gggccaaagccttgtgaagcctgtcgtcaggaggagatatatgaggaaccgacgtctata
cttaatagtaatgaggcttttccagacaatgctgctggtcgagaaatcgcgagtctgcct
gccaggtgtttgaaccagggctgcagctggactggatctataaaagaatatgaggctcaa
cacgaaggtcgctgtgagtacgagcgggtccagtgtgaggcctgccaagcctccatcctc
ctcaaggacaaagacaggcataatgagaaagaatgtgaagaacgaaccctaaactgcaaa
tactgcaaagtgacatccaactttaaagacattaaggcccatgatgagatctgcctgaag
tttcctttacaatgtaaagagtgtggcaagaagaagatccagagagaaaagttcaatgac
cacctcaagtcctgcgtcaagtcaaagagcgcgtgtccattcagtgacgtgggctgcaaa
tctgtgatagagaacgggaagctgagtgaccatgagcacagcagcaccatggagcacctg
cgcctgctgctgcccagggttctgtccttgaccaggactcatgcagaggctccagagtca
ggagagtggcaggaggactcgggctttgggctgtaccgggctcctgaagaggggagtgga
gctgcagcctccaatcagtctttggacctggacaagaaagtgaacgctttagaaaacatc
gtgtgtgtcctgaatcgagaagtggagcgcagttccatcactctggaggcattctctcat
cagcaccgtttggaccaagagaagatagaaaacctgtcgaacagggtgcggcagctggag
cggacgctgacgatgagagacctgcagatttctgagacggaacagctgctgagagagctg
cagcactgcacctacgacggcgtgtttgtgtggaaaatcaccgacttctcccgccgcagg
caggaagccatggccggtcgatcacctgctatgttctcgccagcgttttactccagcaag
tacggctacaagatgtgtctcaggctgtatttgaacggcgacgggacggggcgagggacg
cacctttcgttgttctttgtggtcatgaggggcaaatgtgatgctctgttaaaatggcct
tttagccaaaaggtgactctgatgctcctggatcagaacaacagggagcatatcatcgac
gctttccgaccggatatcacctccacgtctttccaacggccgatcagtgagatgaacatc
gccagtggctgccctctcttctgcccactggccaaactggctggcaagagcgcctacctt
agagatgataccattttcatcaaagccattgttgaccttacaggcttataa

DBGET integrated database retrieval system