Nothobranchius furzeri (turquoise killifish): 107375669
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Entry
107375669 CDS
T05163
Symbol
slit1
Name
(RefSeq) slit homolog 1 protein isoform X1
KO
K06838
slit 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107375669 (slit1)
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
107375669 (slit1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
LRRNT
Laminin_G_1
LRR_1
LRR_9
LRRCT
hEGF
DL-JAG_EGF-like
EGF_3
Motif
Other DBs
NCBI-GeneID:
107375669
NCBI-ProteinID:
XP_015799811
UniProt:
A0A1A8AIY7
LinkDB
All DBs
Position
sgr03:14194918..14297657
Genome browser
AA seq
1548 aa
AA seq
DB search
MNMPSEGSCLETIMGRPAGRWMWVVMLSALILGNTGACPALCTCSGTTVDCHGLGLKTMP
RNIPRNTERLELNGNNLTRVTKTDFAGLKYLRVLQLMENQITVIERGAFDDMKELERLRL
NRNQLQQLPELLFQKNPALSRLDLSENFVQSIPRKAFRGATDMKNLQLDKNHITCIEDGA
FRALRGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLNCDCHLAWLAQWLRQRPMI
GLFTQCTAPLELRGLNVAEVQKHEFSCSGHQDSSSLQPCITGGGSCPAMCTCSNNIVDCR
GKGLTAIPANLPDNMAEIRLEQNGIKSVPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGL
RSLNSLVLYGNKITDLPKGVFDGLYALQLLLLNANKIHCVRANAFQDLQNLSLLSLYDNK
IQTLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCASPRRLANKR
IGQIKSKKFRCSAKEQYVIPGTEDTRLNNACNTDPVCPPKCRCESNVVDCSNLKLTKLPE
HIPASTVELRLNSNEITALEATGVFKNLSQLKKINLSNNKITEIEDGTFEGASSVNELHL
TANQIDSVRSGMFRGLEGLRMLMLRNNKISCVHNDSFTGLHNVRLLSLYDNQLTTIAPGA
FDTLQTLSTLNLLANSFNCDCRLAWLGDWLRSRKIVTGNPRCQRPAFLKEIPLQDVALPD
FRCEEGQEESTCVPRPQCPSECTCLETVVRCSNKHLQTLPKGIPRNVTELYLDGNQFSVV
PKELNTFKYLQLVDLSNNKINSLTNSSFANMSQLTTLILSYNSLRCIPNMAFSGLHSLRL
LSLHGNEISELPDGIFNDVTSLSHLAIGANPLYCDCHLRWLSDWVKTGYKEPGIARCSGP
QGMEGKLLLTTPAKKFECTGDMDSEVLAKCNPCLSNPCLNLGICHNDPMQIYRCSCPPGF
KGKNCETGINACVSGPCANGGTCRVSEENEGEYSCTCPLGFEGPTCQINTDDCEDSDCEN
GATCIDGINNYTCFCPPYYTGEMCEEMEDMCAPGRSPCQHQSTCLITSSGPKCVCSPGYV
GDDCSVDYNDCEEHRCQNGAQCVDELNGYSCICLEGYSGQLCEVPPSPLSLCELADCQNS
APCVERGGRAFCQCPPEFGGPRCEKLVSVNFIDRDSYLLLSDLKNWPQANITLQVSTAED
NGILLYNGDNDHIAVELIQGHVKVSYDPGSQPGHAIYSTETINDGQFHTVELVTFDQMVN
LSIDGGLPTTMDSFGAVRPLNGEAPLYVGGRGPLQNTPPSSAGMPVDVHSGTFRLWQIQN
GSSFHGCIQNLYINNELQDFTKTQMKPGVVPGCEPCKKLYCVHGICQPDGVHGPVCHCQP
GWSGAHCDQPALNPCQGSKCVHGKCIPLDEQSYRCECAEGYRGALCNQQGELFNPCRHLF
CKHGRCQISDTGDAYCHCESGYTGELCDAESECRGEPVRDFYQVQRGYAICQTTRMVSWV
ECSGACDVGACCGSQRMKRRKYTFECSDGTSFSEEVEKTIKCGCVGCM
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgcccagtgaaggaagctgcttggagacaatcatggggagaccggctgggcgg
tggatgtgggtggtgatgctctctgccctgatcttaggcaacaccggtgcctgcccagcc
ctctgtacctgcagcggcaccacagtggactgccatggactgggtctcaaaaccatgcca
cgaaacatcccacgaaacactgaaagactggagctgaatggaaataacctcacacgtgtc
accaagaccgacttcgctggactgaagtacctcagagttctgcagctgatggagaatcag
attaccgtgatcgagcgaggggcttttgacgatatgaaggagctggagcgactgcggctg
aaccgtaatcaactgcagcagcttcccgagctgctgtttcagaagaaccctgccctctct
cgactagatctgagtgagaactttgttcagtccatcccaagaaaagcattcagaggagct
acagacatgaaaaatctgcagctggataaaaaccacatcacctgcattgaggatggagcg
ttcagagcgctgaggggcctggaggtgctaacgctgaacaacaacaacatcagcagcatc
cccgtctccagcttcaaccacatgcccaaactccgaactttccgactccactccaataat
ttgaactgcgactgtcacctggcctggctcgctcagtggctcagacagagacctatgatt
ggtttattcacccaatgcacagcacctctggagctcagaggactcaatgtggccgaggtc
cagaaacatgaattcagctgctcaggccaccaggactcctccagcctgcagccgtgcatt
actggtggaggctcgtgtcccgccatgtgtacttgcagcaacaacattgtggactgcaga
gggaaaggtctgactgccatcccggccaatttacccgacaacatggctgagatacgtctg
gagcagaacgggattaagtctgttcctcccggagccttctctccctacaagaaactccgc
aggatagacctgagcaacaaccagatctcagagatagctccggatgccttccagggtctg
cgctcgctcaactccctcgtgctgtatggaaataagatcaccgacctgcccaagggggtg
tttgacggcctctacgccttacaactgctgctgctgaatgccaataagattcactgcgtt
cgtgccaacgccttccaggacctgcagaatctctcgctgctatcgctgtacgataacaag
atccaaaccctcgccaagggcaccttcacttcactgagagccatacagacccttcacctg
gcccagaacccgttcatctgtgactgtaatctgaagtggctggctgactacctgcgctcc
aaccccattgagaccagcggtgcccgctgcgccagtccacgccgcctcgccaacaagcgt
atcggacaaatcaaaagcaaaaagttccgctgctctgccaaagagcagtacgtcatccca
ggtacagaggacacccgtctgaataatgcctgcaacactgatccagtttgtcctcccaag
tgccgctgtgagtctaacgtagtggactgctccaacctgaagctcaccaagctacccgag
cacatccctgcatctacagttgaacttcgcctcaacagcaacgagatcacagctctggag
gcaactggagtctttaagaacctttctcagctgaagaaaattaacctcagcaacaacaag
atcacagagattgaagacgggacgtttgagggagcttcctccgtcaacgagctccacctc
acagccaatcagatcgactcggttcgaagcgggatgttccgaggcctggaggggctgcgt
atgctgatgttgaggaacaacaagatcagctgcgtccacaatgacagtttcacggggctt
cacaacgttcgcctgctgtccttgtacgacaaccagctgactacgatcgctcccggagcc
ttcgacaccctgcagactctctccactcttaaccttttggccaactcctttaactgcgac
tgtcgtctggcctggctcggcgactggctcaggagcaggaagattgtgacgggtaatcct
cgctgccagcgtccggccttcctgaaggagatcccccttcaggatgtagctctgcctgac
tttcgctgtgaggaaggccaagaggagtcaacctgtgttcctcgcccccagtgtcccagt
gagtgcacctgcctggagacggtggtgcgctgcagtaacaagcacctccagacactcccc
aaaggcatccccagaaatgtcaccgagctgtacctcgatggaaaccagttcagtgttgtt
cctaaagagctgaataccttcaaatacctacagctggttgacctgagcaacaacaagatc
aactctctgaccaactcgtccttcgctaacatgagccaactcaccactttaatcctgagc
tacaactcgctgcgctgtatccccaacatggcgttcagtggactgcactcgcttcgactg
ctgtctctgcatggcaatgaaatctccgagcttcctgatggcatcttcaatgatgtgacc
tctctgtctcatttggcaattggtgctaaccccttgtactgtgactgccacctgcgctgg
ctctccgactgggtgaagaccggatacaaagaacccggaattgcacgctgttctggtcca
cagggcatggagggcaaactgcttcttacaacacctgctaagaagtttgagtgcacaggt
gacatggactctgaagtgctggccaagtgcaacccctgtctgtccaatccctgcctgaac
ctcggcatttgtcacaacgacccaatgcagatctacaggtgcagctgtcctccaggattc
aagggaaagaactgcgagaccggtataaatgcctgtgtgagcggcccgtgtgccaacgga
ggaacctgccgagtgagtgaggagaacgaaggagaatacagttgtacgtgtcctctgggt
tttgagggcccaacttgccaaatcaacactgatgactgtgaagacagcgactgcgagaat
ggcgctacctgcattgatggaatcaataactacacttgtttttgtcccccctactacaca
ggagagatgtgcgaagaaatggaagacatgtgtgctcctggacgaagcccctgccaacat
cagtctacctgcctcatcacctcctctggacccaagtgtgtgtgctctcctggttatgtt
ggcgacgactgcagcgtagactacaacgactgcgaggagcatcgctgtcagaacggagct
cagtgtgtggatgagctgaatgggtattcctgcatctgccttgaaggatacagcggtcag
ctgtgtgaggttcctccatctccactgtctctgtgtgagctggccgactgtcagaacagc
gccccctgtgtggagcgaggtgggcgcgccttctgccagtgtcctcctgaatttggtgga
ccacgttgtgagaaactggtcagcgtcaacttcattgacagagactcctatttactgctg
tcagacctaaaaaactggccacaagccaacatcaccctgcaggtgtctactgcagaggac
aacggtatcctgctgtataatggagacaatgatcacatcgcagtggagctcatccaaggc
cacgttaaggttagctatgaccctggcagccagcccggacatgccatctacagcaccgag
actatcaacgatggtcagttccacacagtggagctggtgaccttcgaccagatggtgaac
ctgtccattgacgggggtctccctaccacaatggacagcttcggggcggtgcggcccctc
aacggggaggcacctctatacgtggggggtaggggccctctccagaacacacctccctcc
tctgcaggcatgccggtggacgtccactcaggcacgttccgcctctggcagatccagaat
ggttccagcttccatggctgtatccagaacctgtacatcaacaacgagctgcaggacttc
accaagacccagatgaagcccggtgtggtgcctggctgtgaaccctgcaagaagctctac
tgtgttcatggcatctgccaacctgatggggtccatggaccggtgtgtcactgccagcca
ggctggagcggagcacactgtgaccagccggctctcaacccctgtcagggcagcaaatgc
gtccatggaaagtgcatcccactggacgagcagtcgtaccgctgtgagtgtgcagagggt
taccgtggcgctctgtgtaaccaacaaggggagctgtttaatccctgccgccaccttttc
tgcaaacatggccgatgccagatctcagacacaggagacgcgtactgtcactgcgaaagt
ggctacaccggggagctctgtgacgcagagtctgagtgtcgaggtgagcctgtgagagac
ttctaccaagtgcagcgagggtacgccatctgccaaaccactcgcatggtctcctgggtg
gagtgcagcggagcctgtgacgtgggggcctgctgcggcagccagaggatgaagcgccgg
aaatacacctttgagtgcagcgacggaacgtccttcagtgaggaggtggaaaagaccatc
aagtgcggctgcgtgggctgcatgtag
DBGET
integrated database retrieval system
