KEGG   Nothobranchius furzeri (turquoise killifish): 107376330
Entry
107376330         CDS       T05163                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03420  Nucleotide excision repair
nfu04110  Cell cycle
nfu04114  Oocyte meiosis
nfu04120  Ubiquitin mediated proteolysis
nfu04141  Protein processing in endoplasmic reticulum
nfu04310  Wnt signaling pathway
nfu04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107376330 (rbx1)
   04120 Ubiquitin mediated proteolysis
    107376330 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    107376330 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    107376330 (rbx1)
   04350 TGF-beta signaling pathway
    107376330 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    107376330 (rbx1)
   04114 Oocyte meiosis
    107376330 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nfu04121]
    107376330 (rbx1)
   03400 DNA repair and recombination proteins [BR:nfu03400]
    107376330 (rbx1)
Enzymes [BR:nfu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     107376330 (rbx1)
Ubiquitin system [BR:nfu04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   107376330 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     107376330 (rbx1)
   Cul2 complex
     107376330 (rbx1)
   Cul3 complex
     107376330 (rbx1)
   Cul4 complex
     107376330 (rbx1)
   Cul7 complex
     107376330 (rbx1)
   Cul8 complex
     107376330 (rbx1)
   Cul9 complex
     107376330 (rbx1)
DNA repair and recombination proteins [BR:nfu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      107376330 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      107376330 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 107376330
NCBI-ProteinID: XP_015800860
UniProt: A0A1A8A2J8
LinkDB
Position
sgr03:complement(68271874..68273383)
AA seq 108 aa
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagcaatggatgttgacacgccaagcggtacaaatagtggagcaagcaagaag
cgctttgaagtgaaaaagtggaatgctgttgcactgtgggcctgggacatagtggtggat
aattgtgctatctgtaggaaccacatcatggatctgtgcatagagtgccaggccaaccaa
gcttctgcaacctcagaagagtgcactgtggcctggggtgtctgcaatcatgccttccat
ttccactgtatctcccgttggctgaagaccagacaggtgtgtcccctggacaacagggag
tgggagtttcagaaatacggacactag

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