Nothobranchius furzeri (turquoise killifish): 107376789
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Entry
107376789 CDS
T05163
Name
(RefSeq) short transient receptor potential channel 5-like isoform X1
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nfu01009
]
107376789
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107376789
Protein phosphatases and associated proteins [BR:
nfu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107376789
Ion channels [BR:
nfu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107376789
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_5
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
107376789
NCBI-ProteinID:
XP_015801544
UniProt:
A0A8C6KGX2
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Position
sgr04:5591026..5796161
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AA seq
1117 aa
AA seq
DB search
MNPMTQLYYKKATYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEV
YYNMDVNCLDPLGRSALLIAIENENLEIMELLLDHGIHTGDALLYAIRKEVVGAVELLLS
HRRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELDPRQCHDLAKLKLAIKY
HQKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGLLFPAFSLIYLLAPKSAL
GRFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTIVEWMILPWVLGFIW
AEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIIPSPKSVWYLLMWLHNKLCRRGQPPGEGSHKCENLREFTVSEGRRRELQIVLM
LQRGVRKSSERHADSLIQNQHYQEVIRSLVKRYVAAMIRSAKTDEGLTEENFKELKQDIS
SFRYEVLDLLGNRRPPRRHYSSSSETTKDDAAGASEDDSESGDGGGGGGGVGGVGVQKSK
SVTFSNPVEEDRRSGPTLGVSALVRSISGMTRIDRGRDGQLEENEGWGEGEEEEEGKPKS
NGLKTAVIPPSSTPVLPSPSSSFSSTFSSSLARTKNRLQRLSTPSSKTDSFKRLSYLFSR
SKRKAPPTPLPLQSPSSYTISDGLLRPLGSHSHSDFGLSDVTRSDTHLNEVGCLVDNPSF
SPLRTNGRDSLLALPLPPPCPCQSLHCASNMSESSSRLLDSSEDVFQSEGTEGAGVGGVD
GGGGRGGVMMMGGWVGPCEDVIEDSCEVIEDSVTTQL
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatgacacagctgtactacaagaaggcgacctattcaccataccgtgaccgc
attccacttcagattgttcgagctgaggtggaactgtctgcagaggagcgggcctacctc
acagctgtagagaaaggtgactatgcaggtgtcaagcatgcccttcgggaggcagaggta
tactacaacatggacgtcaactgtctggacccactgggccgcagcgcgctactcatcgcc
atcgagaatgagaatctggagatcatggagctcctgctggaccatggcatccacacgggc
gacgccctgctgtacgccatcagaaaggaggtggtgggcgcagtggagctgctgctgtcc
cacaggaggccgagtggggagaagcaggttccgtccctcatgatggacagtcagttttca
gagttcacccctgatataactcccatcatgctcgctgctcacaccaacaactatgagatt
atcaagctgcttgtccagagaaaggtcaccatccccagaccgcatcagatacgctgtgac
tgtgtagagtgtgtatccagttcagaggtcgacagccttcgacattcacggtctagactc
aacatctacaaggcactggcctcgccctcactcatcgctctttccagtgaagaccccatc
ctcacggccttcagactgggctgggaactcaaagaactcagcaaggtggagaatgagttt
cgtcaggagtacgaggagctgtcacagcagtgcaaacgattcgccaaagaccttctggat
caggccagaagttcgagagaactggagaccatcctgaaccacagagacaacgaccagagt
gaggagctggaccccagacaatgccatgatttagccaagcttaaactcgccatcaagtac
caccagaaagagtttgtggctcagccgaactgtcagcagctgctggccactctgtggtat
gacggcttcccgggctggaggaggagacactgggccgtcaaactggtcacctgcttcatc
atcggactgttgttccccgccttctcattgatctacctgttggctccaaagagcgctctg
ggtcgcttcatcaagaagcccttcatcaagttcatctgccatacagcatcatacctgacc
ttcctcttcctcctgctgctggcctctcagcacatcgcccgcaccaacctgcacatgcaa
ggacccccgcccaccattgtggagtggatgattcttccgtgggtgctgggcttcatctgg
gcagagatcaaagagatgtgggacgggggcttcacagagtacatccatgactggtggaac
ctgatggactttgccatgaactctctctacttggccaccatctctctgaaaatcgtggcc
tacgtcaagtataactcctctcgtccgagggaggagtgggagatgtggcacccgacgctg
atcgccgaggcgctgttcgccatcgccaacatcttcagctcgctcagactcatctccctc
ttcacagccaactcccaccttggccctctgcagatctcactggggcggatgctgctggac
atcctcaagttcctcttcatctactgcctggtcctgctagcgtttgctaacgggttaaac
cagctgtatttctactatgagacgaaggcctcagaggaacccaacaactgcaagggcatc
cgctgtgaaaagcagaacaacgccttctccacgttatttgagacgctccagtctctgttc
tggtccatatttgggctgctgaacctgtacgtcaccaacgtgaaggctcgccacgagttc
acggagtttgtcggggcgacgatgtttgggacgtacaacgtcatctcgctggtggttctg
ctgaacatgctgatcgccatgatgaacaactcctaccagctcatcgccgaccacgccgac
atcgagtggaagtttgcccgcaccaagctgtggatgagttactttgacgagggcggcacg
ctgccgcccccgttcaacatcatccccagccctaagtccgtgtggtacctcctcatgtgg
ctccacaacaagctgtgcaggcggggccagccgcccggggagggctcacacaaatgtgaa
aacctgcgagagttcacggtgagcgaaggtcgacggcgggagctgcagatcgttctgatg
cttcagagaggagtcaggaaatcttctgagcggcacgctgacagtctgatacagaaccag
cactaccaggaagtgatccggagtctggtgaagagatatgtggccgccatgatccgtagc
gccaaaacagacgaagggctgacagaggaaaactttaaggagctgaagcaggatatttcc
agtttccgctacgaggtgctggatctcctcggtaaccggcgtcccccacggcgacactac
tcctcctccagtgaaacaacaaaagatgatgcggctggagcatcagaggatgacagtgaa
tcgggggatggtggcggaggtgggggaggggttggaggagttggagtccagaagtcgaag
agcgtcaccttctccaacccggtggaagaagacagaaggtcagggccaacgctcggcgta
tctgcgctggtgcgatccatatcgggaatgacgcgaatagacagagggcgggacgggcag
ctggaggagaatgaggggtggggggaaggggaggaggaagaggaggggaaaccaaagagc
aacggcctgaagacggcagtcatccctccgtcctccacccctgtcctcccctctccatcg
tcatcgttctcctccacattctcctcttcgctcgctcgaacgaagaaccgcctgcagcgc
ctctccactccgagttcaaaaacagactccttcaaacgcctctcctacctgttctcccgg
tccaaacgcaaagccccgcctacaccgctccccctccagtccccatcctcctacaccatc
tctgacggattgctccgccccctggggagccacagccactccgactttggactcagtgac
gtcaccagaagcgacactcacctgaacgaggtgggctgtctggtggacaacccgtcgttc
tctccgctgagaacgaacgggcgggactcactcctggcactgcccctcccacccccgtgt
ccctgccaatctctgcactgtgcttccaacatgtctgagtccagctcgcgcctcctggac
tccagcgaggacgttttccaaagcgaaggcacggaaggagcgggtgtgggtggcgtggat
ggtggaggaggaagagggggggtgatgatgatgggcggatgggtgggaccatgtgaagat
gtcatagaggacagctgtgaagtcatagaggactcggtcaccacgcagctatag
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