Nothobranchius furzeri (turquoise killifish): 107379696
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Entry
107379696 CDS
T05163
Symbol
setdb1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu00310
Lysine degradation
nfu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
107379696 (setdb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107379696 (setdb1)
Enzymes [BR:
nfu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
107379696 (setdb1)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
107379696 (setdb1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
107379696 (setdb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_4
DUF5604
Tudor_5
SET
MBD
Pre-SET
PLU-1
Peptidase_S46
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
107379696
NCBI-ProteinID:
XP_015806056
UniProt:
A0A1A8UBC7
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All DBs
Position
sgr05:63784832..63807052
Genome browser
AA seq
1224 aa
AA seq
DB search
MMEISERMEVDGWDSSLEDDLGVSLDDLKKLVEEAVEQSEMVQKKKAQLKELKQWVEQKE
EEEAKTEMLLKDTNQSLKRCEKLVKEAYQLNGLVYRESSSEDEGGGDGLCSEVIEIDDDD
DDDVIAVGCLVPPTKSPGKDSVLKEASAVLQKTSQQVQKLTQMVGKPSPGAPQSLIQVSA
PTIFVSQASSQGTTPPSSSLKKFDLRIGMNILGKKRTKTWHKGTLVAINPIGNGVYKYKV
RFDKGKSLLSGNHVAFDDNPAMEDLFVGARVVARYKDGSLTWLYAGIVAEMPNNKNRMRY
LIFFDDGYASYVILPEVYPVCKPLKRTWEDIEDASCRDFIEEYISAYPSRPMVLLKVGQI
IKTEWEGTWWKSKVEEVDGSLVKILFLEDKRSEWIYRGSTRLEPMFNLKMTSANTQEKKL
AGHQRTRPNMGVLRSKGPVVQYTGVEHAGSSSVPPSQPAATPQLQQRPQPIQPQQPPQIQ
QTPPPSQTIQPQRIENKHQMAKKSTSPFIPGVGGTHASKILQTLSPTSSNLSGKVMAIPN
ASTSQPSVTVSYQRQPSVAPPPPPVTHAMAVIPTQPAYRAPTDRIFYMPHVCQPACLKRI
RPVKPDKHRGKNPLLTPLLYDFRRMTSRRKINRKVSFHVTYKAPCGLCLRKMSEIQTYLF
QTRCDFIFLEMFCLDPYVLVDRPFQPQRPFYYIPDITSGKEDIPLSCVNEIDTTPPPKVA
YSKERIPEDGVVINTSSDFLVGCDCTDGCLDKSKCSCHQLTLQATGCTPGGLINQNAGYL
YKRLEECLPTGIYECNKRCKCCAQMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKG
SFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESEAHCSDSEGSGVDV
SRIKIQPSSLATGNTAAQLSKKGRSLSSSDDSNGEGDKDSKSDDESDSSDDTFVKDNYYS
SSSVWRSYTTRGQLKGNKEGSQDSKDGMSVSGGAASEKPPSIPVEMGKSKVASWLTSQGL
KKDTEDKSQMKSDASKRQDVMTLSDSDDVQTISSGSEDNKEKEKPAPVSGPSVTKKQVAV
KSTRGIALKSHSMMVKTGASGGGAGPSGQGGKAGNQGTPGESGDSGPKNTRLFFDGEESC
YIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNY
EVGSVEGKELLCCCGSTECRGRLL
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgatggagatcagcgagcgaatggaggtggacggctgggactcgagtctggaggacgat
ttgggtgtttccttggatgatctgaagaagctggttgaagaagctgtggaacagagtgag
atggtgcagaagaaaaaagctcagttgaaagaactgaagcagtgggtggaacagaaagag
gaagaggaggcaaagacggagatgcttctcaaagacacaaaccaatctttaaagaggtgt
gagaaactggtaaaggaggcttatcagctgaacggtcttgtctaccgagagagcagctct
gaggatgaagggggtggagatggactgtgctctgaagtcattgagatagatgatgatgac
gatgacgatgtcattgcagttggatgtttggttcctccaacgaaatctccaggcaaagac
tcagtgttaaaagaagcttctgcagttctccagaaaacctcccagcaggtgcagaagttg
acccaaatggtgggcaaaccttcaccaggagctcctcagtcactcatccaggtttcagca
ccgacaatatttgtatcgcaagcttcgtctcaagggacgaccccgccgagctcgagcttg
aaaaaatttgatctccggatcgggatgaacatcctgggaaagaaacgcaccaagacatgg
cacaaaggaaccctcgtggctatcaaccctattggaaacggtgtttataaatacaaagtg
aggtttgataaaggcaagagtttgctgtccgggaatcacgtggcttttgacgacaacccg
gctatggaggacctgtttgtcggggctcgtgtcgtcgccaggtacaaagacggaagcctg
acgtggctctacgcgggaatcgtggcagagatgcccaacaacaaaaaccgcatgaggtat
ttgattttcttcgacgacggctatgcttcatatgtgatactgcctgaagtctacccagtg
tgcaaaccgctgaagcgtacttgggaagacatagaggacgcgtcgtgtcgagacttcatc
gaggagtacatttctgcctaccccagcaggccgatggtgctcctaaaggtcggccagatc
atcaagaccgagtgggaggggacttggtggaagagcaaagtggaggaagtggacggcagc
ttggtcaaaattctctttttggaagataaaaggagcgagtggatttacagaggatccacc
agattagagcccatgttcaatctgaaaatgacttcagcaaacacacaagagaagaaactg
gccggccaccagcggaccagaccaaacatgggagtgcttagaagtaaaggcccagtggtt
cagtacactggcgttgaacatgctggaagttcttctgttcctcccagtcagcctgctgcg
acaccacagcttcagcagcgtcctcagcccattcagccccagcagcctcctcagatccag
caaacgcctccgccctcacaaaccatacagcctcagcgcatcgagaataagcatcagatg
gcaaagaagagcacatctccatttatccctggggttggaggaacacatgcctccaaaatc
ttgcagactttgtcccccacttccagcaacctcagcggaaaagtgatggctattccgaat
gcctctacgtcccaaccctctgtcaccgtttcctaccagagacagccctctgtggctcct
ccccctccacctgtgacccacgccatggccgtaattcctacacagcccgcctaccgagcc
ccgactgaccgcatcttctacatgcctcacgtgtgtcagcccgcttgtctgaaacgaatc
cggccggtgaaaccggacaagcatcgagggaaaaaccccctcctcacacccctgctctat
gattttagacgcatgacgagtcgacgcaaaatcaaccgaaaggtgtcttttcacgtgacg
tacaaggctccatgtggtctctgtctccgtaagatgtcagagatccagacctacctcttc
caaacccgctgtgacttcatattcttagaaatgttctgtctcgacccctacgtgctggtt
gatcggcctttccagccacaaaggccgttttattacattccagacatcaccagtggaaag
gaggacatcccgctgtcctgcgtcaatgagatcgacaccaccccccctcctaaagtagcc
tacagtaaagaacgtattcctgaagacggcgtggtcatcaacaccagttctgatttcctg
gtggggtgtgattgcacggacggctgtctggacaagtccaaatgttcctgccaccagctg
acgctgcaggctacaggctgcacacccgggggactgatcaaccaaaacgcgggatattta
tacaagcgattagaggagtgcctgcctacagggatctacgagtgtaataaaaggtgcaaa
tgctgtgctcagatgtgcacaaatcggctggtgcagcacggtctgcaggtccgcctccag
ctctttaagactcagaacaaaggctggggcatccggtgcttggatgatatcgctaagggc
tcgtttgtctgcatttatgccggtaaaatcctgactgatgacttcgctgacaaagaaggc
cttgaaatgggcgatgagtatttcgccaacctggaccacatagagagcgtggagaacttt
aaggagggctatgagagcgaggcgcactgctcggacagcgaggggagcggagtggatgtg
tccagaatcaaaatccagccgtcctctttggccactggaaacacggccgcacaactttct
aaaaaaggccgaagcttgagctcatcagacgacagcaacggggaaggcgacaaagactcg
aagagcgacgatgaaagcgacagttcagacgacacgtttgtgaaggacaactactactcg
tccagttcggtgtggaggagttacaccacgcggggtcagctcaaaggcaacaaggaaggg
agtcaggatagcaaagatggaatgagcgtttcaggaggggcagcttctgagaagccccca
tcgataccagtggagatggggaaaagcaaagtggcttcctggctaacgagccaggggctg
aagaaggacactgaagacaaaagtcaaatgaagtctgatgcatccaagaggcaggatgtg
atgacgctgtctgacagcgatgacgttcagactatcagctcaggatcagaggacaacaag
gaaaaagaaaaacccgctccagtttctggccccagcgtgaccaaaaagcaagtggctgtg
aaatccacccgaggcatcgccctgaagagccacagcatgatggtgaaaacgggagcatcc
ggaggaggggcggggccaagcgggcaaggagggaaagctggaaatcagggaacgcccgga
gaaagtggcgacagcggtcccaaaaacacccggctgttcttcgacggggaggaatcctgt
tacatcatcgacgcaaagttggaggggaatcttgggcgatatcttaatcacagctgcagc
ccaaacctttttgtccagaatgtgtttgtggacacacacgacctgcgattcccctgggtg
gccttctttgccagcaagcgtatccgggccggcaccgagctgacctgggactacaactat
gaggtggggagtgtggagggtaaagagctgctgtgctgctgcgggtccacagagtgcaga
ggaaggctactgtga
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integrated database retrieval system
