Nothobranchius furzeri (turquoise killifish): 107381722
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Entry
107381722 CDS
T05163
Symbol
fbn1
Name
(RefSeq) fibrillin-1
KO
K06825
fibrillin 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04350
TGF-beta signaling pathway
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
107381722 (fbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107381722 (fbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107381722 (fbn1)
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107381722 (fbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
hEGF
EGF
FXa_inhibition
TB
EGF_3
Fibrillin_U_N
Plasmod_Pvs28
FBN_EGF_st1
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
107381722
NCBI-ProteinID:
XP_015809043
LinkDB
All DBs
Position
sgr07:38375670..38476112
Genome browser
AA seq
2923 aa
AA seq
DB search
MSDSKRGGRLLQLAVALLALLQLFAGLGDAAEVLEVQDSELVTRQTDRANRAKRRGGTDV
LRGPNVCGSRNNAYCCPGWKTLTGGNQCIVPICRSPCGDGFCSRPNMCTCPNGQISSSCG
SKSVQHCNIRCMNGGTCAEDNCQCQKGYVGNHCGQPVCENGCLNGGRCVAPNRCVCTYGF
TGAQCERDYRTGPCFASVNNQMCQGQLSGIVCTKTLCCATVGRAWGHPCEMCPAQPHPCR
RGFIPNHRTGACQDVDECQAIPGICQGGNCINTVGSFECKCPDGHKFNEISQKCDDLDEC
SNIPGLCGVGECFNTAGSYFCKCPQGYYTSVDGSRCVDARAGYCYARLLNGRCANQNSQQ
LTKMQCCCDSGRCWSDGSIPEMCPIRGTEEYQRLCIQTLDTNGVLIPGRIPGSPDQPGIY
PVPVPGQLPQVIPGQIPIQIPGQVPGQIPIQIPGQVPGQIPIQIPGQLPVQIPGQIPGQF
PGQFPGPIQPPPPGPNVVQALNITNMCQAFRNLCLNGRCIPMPSIGYRCECNMGFRLDVR
GECIDDDECERTPCAHGECLNTPGSYICQCPAGFQSTATRTECRDLDECVANGRICNNGR
CVNTEGSFHCVCNAGFEISVDGKNCQDQDECLIRNMCLNGLCINEDGSFKCICKPGFLLD
TSGRMCVDIDECETPGMCMNGHCVNTEGSFRCECMAGMAVGLDGRICVDTHMRSSCYGGY
KRGQCIRPLFGAVTKSECCCASTDYAYGEPCQPCPSQSSAEFLALCPSGIGITGGGIDIN
ECALDPDICQNGVCENMLRTYKCTCNEGFEVDLSGKNCVDIDECLMNRLLCDNGLCRNTP
GSFTCQCPKGFRFDPETDVCEDVDECESSPCINGDCNNSQGSFVCTCSAGSSLDNTGLEC
IETTKSTCWLKIVNNRCEVNINGATLKSHCCATLGEAWNSPCAKCEKDPICGKGFARVKG
NACEDVDECQVFPGVCINGKCVNTQGSFFCQCPPGMTVDVSGRMCIDLRTEHCYLTHDDE
RCGLAISGKHRVDACCCSVGVAWGPECDECPEEGSSEFAQLCPRGPGFSHRGDFINGKPF
LKDINECRMINTLCSNGRCRNTIGSFRCRCDSGYALDSDERNCTDIDECRISPDLCGQGR
CVNTPGDFECECFDGYESGFMMMKNCMDIDECERNPLLCRGGECVNTEGSFQCVCPDGHS
VAPDGSGCLDINECELSDRLCRNGQCVNMIGRYQCSCNTGYKSTEDRLDCVDIDECTIEN
GGCETFCTNSEGSYECSCHSGYALMPDLRTCTDIDECEESLGICDGGQCTNTPGTYQCLC
FDGFMSSEDLKTCLDVDECELNPNICLSGNCENTKGSFICHCDLGYSVRKGSTGCTDINE
CEIGAHNCDRHATCTNTAGSFKCNCAPGWIGDGIKCSDLDECSNGTHMCSSNANCLNTMG
SYRCACKEGFSGDGFFCSDSDECAENGNLCESGHCLNLPGGFRCECDMGFITTSDGKACE
DIDECTFVDICVNGRCRNIPGLFRCECNRGYELDRSGGNCTDINECADPTICMNGVCVNI
PGNYHCNCPPDFELNPTRVGCVDTRSGSCYKDARSRGDASVNLDCSNEIGVGVSKASCCC
SEGRGWGSPCELCPSVNSSEYKTLCPGGEGFRPNPITVILEDINECQELPGLCQGGQCIN
TFGSFQCECPRGFVLNPDTRVCEDFDECEQPGICGPGKCYNTIGNYTCICPVDYMQVNGG
HNCMDMRKSYCYRNFYSDNRTCDGELNFNMTKKMCCCSYNIGHAWNKPCEQCPVPNTDEF
AVLCGSERPGYYIDITTGRVIDIDECREIPGVCENGVCINMIGSFRCECPVGFIYNDKLL
ICEDIDECQNGPVCQQNADCLNVPGSYRCECKSGYRFTPTGQCLDRNECLENPGICNPGQ
CIDFVGSYRCLCPNGYKTTRDQSMCVDVDECERQPCGNGTCKNTVGSYNCLCYPGFLNSH
NSDCIDVDECSTQRGLCRNGQCVNTLGTFHCVCNDGYELALDGRLCADINECTVNPGTCG
AGTCLNMDGTYRCICPPGYYLHEETCEDIDECSNSPEICTFGTCSNTDGSFTCLCPEGFQ
LSASGRRCLDTRVHYCYTKFENGRCLVPKPQNTSKAECCCTGMPGQGWGSPCEICPSKGE
EAYRILCPNEGYERGPDDHPKDINECLNDPCINGQCINTDGSFRCECPLGYHLDSSGVRC
EDTNECDIGNPCGNGTCTNVIGAFECSCDDGFEPGPMMTCEDINECAQNPLLCAFRCVNV
VGSYECKCPTGYILREDRRMCKDQNECEDGVDDCASRGMTCKNLIGTYMCICSPGYTRQP
NGDGCMDLNECTAKPGICKNGRCENTVGSYRCRCDQGFISNPTQTECIDNREGFCFTEVL
TILCQMSSSNRNLVTKSECCCDGGRGWGTNCELCPLPGTTQYKKMCPLGPGFTTDGRDID
ECRVMGNLCKNGQCVNSIGSYSCLCKPGYTTDITGSQCVDVDECIQAPKPCNFICKNTEG
SYLCSCPRGYILQEDGKSCRDLDECSTKQHHCQFLCINTIGGFTCKCPPGFTQHHSSCID
NNECSTDPNLCGSNGVCQNTPGSFNCDCQRGFSLDPNGQACEDMDECDGNHRCQHGCQNL
VGGYRCSCPQGYLQHYQWNQCVDENECMNSQICGGASCHNTLGSFRCLCPTGFNYEQMSG
SCTDVNECSTTQNPCKFGCSNTDGGYLCGCPPGYFRAGQGHCVTGLGFTSGGQDGEVDDN
SLSPEACYECKINGHPKKGRKRRSTNSTRDDAMEDLQLTEEISLASVDIENTLQLHLNIS
DLSNRDHILEFTPALSTLSDHVRYNINNGNEEGFFKINQKDGVSYLHFSKKKALMPGAYD
LQISSEPLYRKKELAELEDQHDKDYLTGQLGEILKMRVKLILH
NT seq
8772 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagtaagcgtggaggacggctgctgcagttggccgtggctctattggccttg
ctgcagctctttgcaggacttggcgatgctgcagaggtgctggaggtccaggacagcgag
ctggtgaccaggcagaccgatagagccaacagggcaaagaggaggggaggaacggacgta
ctcagaggaccaaatgtgtgtggctccaggaacaacgcctactgctgcccaggctggaag
actcttacaggaggaaaccagtgcattgttccgatctgccggagtccatgtggagatggt
ttctgctccagacccaacatgtgcacctgccccaatgggcagatttcttcatcctgtgga
tccaagtcagtccagcactgtaacattcggtgtatgaacgggggaacgtgtgcagaagac
aactgccagtgtcagaaaggctacgtgggaaatcactgtggtcaaccggtttgtgaaaat
ggctgtctgaatggaggacggtgtgtggctcccaacagatgtgtgtgcacatacggattc
accggagcccagtgcgagagagattaccgcacagggccgtgctttgcctctgtcaataac
cagatgtgccaaggccagctctcagggattgtatgcacgaaaacattgtgctgcgccaca
gtgggacgggcatggggtcacccctgtgagatgtgcccagcccagcctcacccttgccga
agagggttcataccaaaccaccgaaccggggcgtgccaagatgtggacgagtgccaggcc
atccctggcatctgccaaggaggaaactgcatcaacacggtgggatcctttgaatgtaaa
tgtcccgatgggcacaaattcaacgagatctcacagaaatgtgatgatctggatgagtgt
tcaaacattcctggtctttgtggtgtgggcgaatgctttaacactgctggcagctacttc
tgcaagtgtccccagggatattacacctctgtggatgggtccagatgtgttgatgcacgt
gctgggtattgttacgccagactgctgaacggacgctgtgccaaccaaaactcacaacag
ctgactaaaatgcaatgctgttgtgatagtggacgctgctggtctgacggctccatacca
gagatgtgccctatccgtggaacagaggaataccagaggctttgcattcagacgctcgat
acaaatggagttctgatacctggccgtatcccagggtctccggaccaacccggcatctac
cccgttccagttcctggccaattacctcaagtgattcctggtcaaattcccattcaaatt
cctggccaggtccccgggcaaattcccatccaaattcctggccaggtccccgggcaaatt
cccatccaaattccaggccagctccctgttcaaatcccaggtcaaatccctggacaattt
ccaggacaattcccaggacccatccaacctcctcctccaggccctaatgtagtccaagcc
ctgaatatcactaacatgtgtcaggctttccgaaacctctgcctgaatggcagatgtatt
cccatgccgagcattggatatcgctgcgagtgcaacatgggattcagactggacgttagg
ggagagtgcatcgatgatgatgaatgtgagaggaccccatgtgcacatggagagtgtttg
aacaccccagggtcttacatctgtcagtgtcctgctggatttcagtcaacagcaactcga
acagagtgcagagatctggatgaatgtgtggccaatggtcgtatctgcaacaatgggcgc
tgtgtgaacactgaaggcagcttccactgcgtctgcaacgctggatttgaaatttcagta
gatggcaaaaattgtcaagatcaggacgagtgtctgatcaggaacatgtgcctcaacgga
ctttgtatcaatgaggatggcagcttcaagtgcatctgtaaacccggattcctgctggac
accagtggacgcatgtgtgttgatatcgatgagtgtgagacgccaggtatgtgcatgaac
ggacactgtgtcaacaccgagggttcgtttcgctgcgagtgcatggctgggatggcggtg
ggcctggatgggcgaatttgtgttgatacacacatgcgtagttcatgttatggcggctac
aagcgaggccagtgtattaggcctttatttggagctgtgaccaagtcagagtgttgctgc
gcaagcacagactatgcctacggagagccctgccaaccatgcccttcacaaagctctgca
gagtttctggctctgtgtcccagtggcatcggtataaccggcggtggaatagatatcaac
gaatgtgcccttgaccctgacatctgtcagaacggagtgtgtgaaaacatgctgaggaca
tacaaatgcacctgcaatgaaggctttgaggtagacctttcaggcaaaaactgtgttgat
atcgatgagtgtctgatgaacaggctgctgtgtgacaacggtctgtgcaggaacacgccc
gggagtttcacctgtcagtgtcctaaaggatttcgctttgacccagagacggacgtgtgc
gaggatgtggacgagtgtgagtctagtccctgcattaacggagactgtaataacagccag
gggtccttcgtgtgtacgtgttcagcaggcagttccttggacaacacggggctggagtgt
atagagacaactaagagcacctgctggttgaagatagtcaataaccgctgtgaggtgaac
atcaacggagccacgctgaaatcccactgctgcgccacactgggagaagcctggaatagt
ccatgtgccaaatgtgaaaaagatccaatatgtggtaaaggctttgcaagagtcaaagga
aatgcctgtgaggacgtcgatgagtgtcaggtgtttccaggtgtttgcattaatggcaaa
tgcgtcaacacacaaggctcctttttctgccagtgccctccaggaatgactgttgatgtc
agtgggaggatgtgcattgacctgcgcactgaacactgttacctcactcatgatgatgag
cgttgtggattggctatatctgggaagcaccgcgtggacgcttgctgctgctccgtgggc
gtcgcctggggtcctgaatgtgacgagtgtccagaagagggatcttcagagtttgcccaa
ctttgtcctcgaggccccggcttctcacatagaggtgacttcatcaatggcaaacccttc
ctcaaagacataaatgagtgcaggatgataaacacgctgtgctccaacgggaggtgcaga
aacaccattggcagcttccgttgtcgctgcgatagcgggtacgctctggactctgacgag
agaaattgcactgacatcgacgagtgccgaatatctccagacctgtgtggacagggcagg
tgtgttaacacgccgggggattttgaatgcgagtgcttcgacggctatgaaagtggcttc
atgatgatgaaaaactgcatggacattgacgagtgtgagaggaaccctctgttgtgtcgt
ggaggtgagtgtgtgaacacagagggcagcttccagtgtgtgtgccctgacggacattcg
gtcgctcctgatgggtcgggctgtctagatataaatgaatgtgagttgagcgacaggctg
tgcaggaatggacaatgtgttaacatgatcggccgctaccagtgttcgtgcaacacggga
tacaaatccaccgaagacaggctggactgtgtcgacatcgatgagtgtacgatcgaaaac
ggcggctgtgagactttctgcacaaactcagagggcagctatgagtgcagctgccacagc
ggttatgctctgatgcccgacctgaggacctgcactgacatcgatgagtgtgaggagagc
ctcggcatctgtgatggaggccagtgcaccaacaccccagggacctaccagtgtttgtgc
tttgatggcttcatgtcttcggaggatttgaagacctgcctggatgtggatgagtgtgag
ctgaacccaaacatctgtctgagtgggaactgcgagaacacgaagggatccttcatctgt
cattgtgatctggggtattctgttcgcaaggggagcacaggctgcacagatatcaacgag
tgtgagatcggagcccacaactgcgacaggcatgcaacctgcaccaatacagccggcagc
ttcaaatgcaactgtgcaccagggtggattggcgacggcatcaaatgctcagacctggat
gagtgttcaaatgggacccacatgtgcagcagcaacgccaactgcctcaacaccatgggc
tcatatcgctgcgcgtgcaaagagggattctctggagatggattcttctgctcagacagc
gatgagtgcgccgagaacggcaacctatgtgaaagtggccactgtctgaatctacctgga
ggcttccgctgcgagtgcgacatgggcttcatcaccacctctgacggaaaggcctgcgag
gacatagacgagtgtacatttgttgatatctgtgtcaatggacgctgccggaacattcca
ggactttttaggtgtgaatgtaaccgtggttatgaactggacaggagtggaggcaactgc
actgacatcaatgaatgtgcagatccaaccatctgtatgaatggggtgtgtgttaatatc
cctggaaactaccactgcaactgcccaccagactttgaacttaaccccactcgggtgggt
tgtgtagacactcgttctggaagctgctacaaggatgcccgttcccgtggagacgcctca
gtgaacttggactgctccaatgagattggagttggagtttccaaagcatcctgctgctgc
tccgagggccgtggctgggggtctccgtgtgaattatgtccctctgtcaactcatctgag
tacaagacgttgtgtcctgggggagagggcttcagaccaaacccgatcacagtcatcttg
gaagacatcaatgaatgccaggaacttccgggcttgtgccagggaggacagtgcatcaac
actttcggaagtttccagtgtgaatgtccacgaggcttcgtcctcaacccagacaccaga
gtctgtgaagattttgatgagtgtgaacaaccaggaatctgtggtccgggtaagtgctac
aacaccattgggaactacacttgtatttgccctgtggactacatgcaggtgaatggaggg
cacaactgtatggacatgaggaagagctattgctacaggaacttttactcagacaacagg
acatgtgatggtgagctgaacttcaacatgactaaaaagatgtgctgctgctcctacaac
attggccatgcgtggaacaagccttgtgaacagtgtcctgtgcccaacactgatgagttt
gcagtcctgtgcggcagcgagaggccaggctattacatcgacatcacaacaggaagagtt
attgatattgatgagtgcagagaaatcccaggagtgtgtgagaacggtgtgtgcatcaac
atgattggtagcttcaggtgtgagtgccccgtgggtttcatttacaacgacaagctactg
atttgtgaagatattgacgagtgtcagaatgggccagtctgccagcagaatgctgactgt
ttgaacgtgcctggaagctaccgctgtgaatgtaaatctggatatcgcttcacccccact
ggacaatgtcttgaccgtaatgagtgccttgagaacccgggtatatgtaatcctggtcag
tgcattgactttgtgggaagctaccgctgcctttgccccaatggctacaaaacaacccgg
gaccagtccatgtgtgtcgacgtggatgagtgtgagaggcagccctgtggcaatgggacg
tgcaagaacacggtgggctcctataactgtctgtgctacccaggttttctgaactcacac
aacagcgactgcatcgatgtggatgagtgttcgacacaaaggggcttgtgtcgaaatggt
cagtgtgtcaacacgttgggaaccttccactgtgtgtgtaatgatggctacgagctggct
ttagacggcaggctttgtgctgatatcaatgagtgcaccgtgaatccaggcacatgtgga
gccggcacttgtctgaatatggatggaacctacaggtgtatttgccctcctggctattac
ctccatgaggaaacctgtgaagatattgatgagtgttccaattcgcctgagatctgtacg
tttggaacctgctccaacaccgacggaagcttcacctgcttgtgccctgagggcttccag
ctctctgcctcgggacgcagatgtttagatacccgtgtgcactactgctacaccaagttt
gaaaatgggcgctgcctcgttccgaagcctcagaacacgtctaaagcagagtgctgctgc
actggaatgcctggacaaggctggggaagcccctgtgaaatctgccccagcaaaggagag
gaggcttatcgcatcctctgtcctaatgaggggtatgagcggggtccggatgaccaccca
aaagatatcaatgaatgcctcaatgatccatgcattaatggccagtgcatcaacacagac
ggctccttccgttgtgaatgtcccttgggatatcatttggatagcagtggagtccgatgt
gaagacacaaatgagtgtgacattggtaatccctgtggaaacggtacatgtactaacgtc
attggcgcctttgagtgttcgtgtgatgacggcttcgagcctggaccaatgatgacctgt
gaagacatcaatgagtgtgcccagaatcctctcctgtgtgcctttcgctgtgttaatgtt
gtgggctcgtatgagtgtaaatgtcctacaggatacatcctgcgagaggacaggaggatg
tgcaaagatcagaatgagtgtgaagacggtgtagatgactgtgccagcagaggaatgacc
tgcaagaacctgattggtacatatatgtgcatctgctcacctggatacacacgccaaccc
aatggagatggatgcatggatctcaatgagtgtacagccaaaccgggtatctgtaagaat
ggccgctgtgaaaacacagttggaagctatcgctgcagatgtgaccaaggattcatttct
aaccccacacagacagaatgcattgataaccgggaaggcttctgttttaccgaagttctg
accattctgtgtcagatgtcgtccagcaacaggaacctggtgacgaagtctgaatgttgc
tgcgatggcggccgaggctggggcaccaactgtgaactctgccccctgccaggaaccacc
cagtacaagaagatgtgtcccctgggtccagggttcaccactgatggcagagacattgat
gagtgtcgtgtgatggggaatctgtgtaaaaatggtcagtgcgtcaacagtattggctcc
tatagctgcctctgcaaacctggctacaccactgacatcactggctcacagtgcgtggat
gtggatgagtgcatacaggcaccaaagccttgtaacttcatctgtaagaacaccgaagga
agttacctctgctcctgccctcgaggatacatcctgcaggaggatggaaagagctgcaga
gatctggacgagtgttcgaccaaacaacaccactgccagttcttgtgcattaacactatt
ggtggcttcacatgcaaatgtcctcctggcttcacccagcatcactcttcctgcatcgac
aacaacgaatgttccactgatcccaatctgtgcggctccaacggggtctgccagaacacc
ccggggagcttcaactgtgattgccagcgaggattctcattagatcccaacgggcaggct
tgtgaagatatggacgagtgtgatggaaaccacaggtgtcagcacggctgtcagaactta
gtgggtggatacagatgtagctgcccacaaggttaccttcagcactaccagtggaaccag
tgtgttgatgagaatgagtgcatgaacagtcagatctgtgggggagcatcgtgccacaac
accctggggagcttccgctgcctctgtcccactggcttcaactatgagcagatgtccggg
agctgcacagatgtcaacgagtgctcaaccacccagaacccctgcaagttcggctgctcg
aacacagatgggggctacctctgtggatgcccgcctggatacttccgtgcaggacaaggt
cactgcgttacaggtctgggcttcacaagtggtggacaggatggggaggtggatgataac
tctctctcacctgaagcctgttatgaatgtaagattaatggccaccccaagaagggacgg
aaacgccgtagcaccaactcaacacgggatgacgctatggaagacctgcagctgacagaa
gaaatcagtctagccagcgtggacatcgaaaacacccttcagttgcacctgaacatcagt
gacctcagtaaccgcgaccacatcctggagttcacgccggccctatccacgctcagcgac
cacgtgagatacaacatcaacaatgggaatgaggaaggcttttttaaaattaatcagaag
gacggtgtcagctacctgcatttcagtaagaagaaagctctcatgccaggggcgtatgac
cttcagatcagcagcgagcccctctacaggaagaaggagctggctgagctggaggaccag
cacgataaagactacctcacaggacagctgggagaaatactgaagatgagggtgaaactc
atcctccattaa
DBGET
integrated database retrieval system
