Nothobranchius furzeri (turquoise killifish): 107382301
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Entry
107382301 CDS
T05163
Name
(RefSeq) low-density lipoprotein receptor-like isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107382301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107382301
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
107382301
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
TMEM154
Psg1
EGF
Motif
Other DBs
NCBI-GeneID:
107382301
NCBI-ProteinID:
XP_015809887
UniProt:
A0A1A8A3Y3
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Position
sgr08:6623042..6629782
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AA seq
851 aa
AA seq
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MTMWKGLAGLSSWWCLVMLIHLLAQTDTAFACSSTQFTCGNGRCITRRWICDGTDDCGDA
SDELPAVCATKTCLESQFNCGAPLNQCIPKSWHCDGSADCRNGADETNCTAKQCRDEEFQ
CANGQCVSKAFVCDKENDCSDGSDESSCPKPTCSLHSFQCHDSVCVPDIWRCDGDRDCRD
GSDEWPENCLDKQPRERPSKCGAHDFECANGECVHQSWRCDGGIDCTDRSDELNCSHPTC
RHDEFRCDNGTCISDSLRCNSVHDCLDGSDEAGCHTEDACKDPNQFKCGSGECISMDKVC
DKDRDCSDGSDQPEGQCGVDECLTANGGCSHTCNNLKIGYNCSCPAGYSLKTDNKTCQDI
DECEEPDTCSQLCINLLGSYKCDCYDGYEIDPVSNACKAGSGTVPMLFFTSQHEVRKITV
DHSEYVRLIPQLKNAVALDLDIPNKRIFWSDLSEKKIYSSGIDEVDDSSRHIEVIGSGLE
TPEGLAVDWIYGNIYWTDSLLKSISVASTDGVKRKTLITTNLGKPKAITVDPVNNFMYWT
DWGEEPKIEKCGLNGAGRVILVKEGIERPNGITLDMVNQRLYWVDAKLHTIFSIDVYGGS
RHTLIHSEEQLSWPSSLAVFEEKVYWTDIINGAVFSANRLTGKNITTLAVDLERPEDIVL
YHDLKQSAGVNWCRNSHSVNGGCEFLCLPAPLTGDRAPKYTCSCSDSTTLGPDGKKCVEA
PQAPTSQTTTTTTTSTAQTSTTTSPIQTTQRTEEPVVPAEGRKQSVTPEEAPSSHPLALY
IVLPIVVLAMLSFGAVMLWRHWRVKNTNTIHFANPVYQKTTEDEVHICRSGFDGHVYPER
QMVSMEDMDMA
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgactatgtggaagggactcgccgggctgtcctcgtggtggtgtctggtgatgctgatt
cacctcttggctcagacagatacagcgttcgcatgcagctccacccagttcacctgtgga
aacggaaggtgcatcacgcgcaggtggatctgtgacggtactgatgattgtggcgatgcg
agcgatgaacttcctgctgtctgtgctaccaaaacttgcctggagtcccagttcaactgt
ggcgctccgctgaaccagtgcatcccgaagagctggcactgcgacggcagcgccgactgc
agaaacggcgccgatgagacgaactgcactgcaaaacaatgccgagacgaagagtttcag
tgcgccaacggccagtgtgtgtccaaggctttcgtctgtgacaaagaaaacgactgctcc
gatgggtcggacgagagctcctgccccaaacccacctgcagccttcactccttccagtgc
cacgactctgtgtgtgttcctgacatatggcgctgcgatggagaccgagactgtcgggac
gggtccgacgagtggccagagaactgcctggataaacagccgagggagaggccttcaaaa
tgtggagcacacgactttgagtgtgcaaacggggagtgtgtccaccagagctggcgctgt
gacggagggatagactgcacggatcgatcggatgagctcaactgcagtcacccaacttgc
cgccacgatgagttcaggtgtgataacggcacgtgcatcagcgacagcctgaggtgtaac
tcggtgcacgactgcttagacggcagtgatgaggctgggtgccacacagaagacgcgtgc
aaagacccaaaccagttcaagtgtggcagcggggagtgcatcagcatggacaaggtgtgt
gacaaggacagagactgcagcgatggctctgatcaacctgagggtcaatgtggtgtagac
gagtgtcttacagcaaacggtggctgctcccatacctgcaataacctgaagattggctac
aactgctcctgccctgctggatacagtctgaagacagacaacaaaacctgccaagacatc
gacgaatgtgaggagccggacacgtgcagtcagctgtgcatcaacctgcttggcagctac
aagtgcgactgctacgatggctatgagatcgacccagtgagcaacgcgtgcaaagctgga
tcagggactgtacccatgttgttcttcacaagccagcatgaggtgaggaagatcacggtg
gaccacagtgagtacgtcaggctgatccctcagctgaagaatgcagtggctctggacttg
gacataccgaacaagaggatcttctggtcggacctgtctgagaagaaaatctacagctcc
ggtatagatgaggtggacgactcttctcgtcacattgaagttattggcagcgggcttgag
accccagagggacttgcagtggattggatctatggtaacatctactggactgacagcctt
ttgaagagcatctctgtagcatcgacagatggcgtcaagaggaagaccctcatcacgaca
aacctcgggaagccaaaagctatcacagtcgacccagtgaacaacttcatgtactggaca
gactggggggaggagcctaaaattgagaagtgtggactaaatggtgccggtcgtgtcatc
ttggtaaaggagggcattgaacggcccaacggcatcaccctcgatatggtcaaccagcgt
ctgtactgggtcgacgccaaactgcacaccatcttcagcatcgacgtctacggaggaagc
agacacacgctcatccatagcgaggagcagctcagctggccgtcctcgctggctgtcttt
gaggagaaagtctattggactgacatcatcaacggggctgttttcagcgccaaccgcctg
acaggaaagaacatcacaacgttggcagttgacctagaacgtccagaggacatcgtccta
taccacgacctcaagcagtcagctggggtaaactggtgcagaaacagccacagtgtgaat
ggaggttgtgagtttctgtgcctcccggctccgctcactggggaccgtgctcctaaatac
acgtgctcctgctccgacagcacgacgcttggtcctgatggaaagaaatgtgtggaagcg
ccccaagctcctaccagccagaccacgacgacgaccaccacctccaccgcccaaacgtct
acaactacctcacctatccagaccacacagcgcacagaggaacccgttgttcctgcagaa
ggtaggaagcagtcggtgacgcctgaggaggctccttcctcccaccctcttgctctctac
attgttctgcccattgtggtgctagcaatgctgtcgtttggagcagtgatgctatggagg
cactggcgcgtgaagaacaccaacaccatccactttgctaatccagtctaccagaagacc
accgaggacgaggtgcacatctgcagaagcggctttgacggccatgtttaccctgagaga
caaatggtgagcatggaggacatggacatggcctga
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