Nothobranchius furzeri (turquoise killifish): 107384568
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Entry
107384568 CDS
T05163
Name
(RefSeq) zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
107384568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107384568
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
107384568
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
zf-C2H2_aberr
Motif
Other DBs
NCBI-GeneID:
107384568
NCBI-ProteinID:
XP_015813381
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Position
sgr10:3417235..3442496
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AA seq
1297 aa
AA seq
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MRRSQKQKQILKIFLSSPAGLTSSPIISDISLIRLSPAAVATGESPFSPPHPYVSPHMEQ
YLRSIHGSPALSMIPAGRGLNPAECNSTSLTHILAHEHLKDRGLFGLPPPPPGASPAEYY
HLMAGHRSPYSELLLQGAGAAAGAHLSDYICPIDVSRFSSPRLTPRISRKRALSISPLSD
ATIDLHTMIRTSPNSLVAYINNSRSGSTASSSYGHLSVGGLSPPFPFHHPVNSMAYQQLL
SHQRSLSAFGHNPALIQTPPTFSEHQAGLSLPSVTINDVEVQNLKDDSAVSSSVDPFTNK
RPKVKAEGEGLRSASSLSPNHHSSLLDLKEDGDHDKCVQEPEMVYETNCHWEGCRREYQT
QDQLVHHINNDHIHGEKKEFVCRWEDCSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGC
SKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPG
CTKRYTDPSSLRKHVKTVHGPEAHVTKKHRGDQPPRPPAPKENSENESSRREMLHREDKM
SGNSSPRYVEDYLHVKSIKTENTVMYQSSPGGQSSCSSEPSPLGTNNDSGVKTAAQSRGS
QGDIRPLDHLPYTNSMGCEETSGGVAVVGLYPRKKFSNIQCLEQLKTNLRSVRDSSQWTK
NPTPPVHGITLPPIPTRGPPLECSGVRVDPALYSTYGQLRSGKTNLLGDTSEHRDSPSST
LSVVYTLSSCSSGISPDFLSRHSSQTSKAGANLLSSISSADSYDPISADTSRRSSQTNQC
RVHSSGPVHISLLNITQHYHLKAKYAAATGGAPPTPLPHMDRMNLKSCLELYEDSKKSLC
ARSQMTHEVPSNIPRRASAQERIFDLLNHPHVLQYNSMETVSRGVIIQPCPPDRQHSAQT
GCLGSGDGLDQFAYILRTADISTTIINEKETNTTQDATNLNDFQSTPNVRQSSTEVLKLR
PLGRGQTLARTTRGQWNACSLGLLDPTQQNSKLQGNLAFLQHNPTFGSFNLTPNREMFQS
LTNRGQRNFIQLSSEKGLNLFQPFSNLSEVAGPWYRPCEDTGTFDANGNPVDGLCGNMAE
DTRSIQTWTQEPALLDFVELKHVQVKTEICDVSGLILDQQNCNVILQKIHPSKNQNHLQS
GPSTGPKSLNPSDPELMQQTDCGSGHPCSPEDHALLYMGQFQVFESRGDLDCYGSNVNVS
PLENSAPASSSCENHLKPTLMDFQSLLDDGDYSSQMPETLNPGLTQSFSQSYSHPTTLRN
LVTLPLVPTGSGIIAFRNMSSLLVALAEGNKLLNLNC
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaagccaaaaacaaaaacaaatacttaaaattttcctctccagtccagcaggt
ctgacgagcagtcccatcatctctgatatctccctgatccgtctctctcctgctgccgtg
gcgacgggtgaatctccgttcagcccgcctcacccctacgtctccccccacatggagcag
tatctgcgctcaatacacggaagccctgccctgtccatgatcccggcaggccgaggactc
aacccagcagaatgtaactccaccagcctcacacatatcttggcccatgaacacctgaag
gaccgcggtctgtttggactccctcctcctcccccaggggccagtccagctgagtattac
cacctgatggctggccaccggagcccctacagcgagttgctcctgcagggggccggggcc
gccgctggagcccacctgtctgactacatctgtcccatcgatgtttcccgattttccagt
cccagactcacaccccggatcagcaggaagcgggctctgtccatctctcctctgtccgac
gccaccattgatcttcatactatgataaggacttcaccaaactccctggtggcgtatatc
aacaactcacgttcaggctcaaccgccagcagttcttatggtcacctgtcggtgggagga
ctcagcccaccctttcctttccatcatcctgtcaactccatggcctaccagcagcttctt
tctcatcagagaagtcttagcgcctttggtcacaacccagccctaatccagactccacct
accttctctgaacaccaggcaggcctcagcctgccctcagtgaccatcaatgatgtggaa
gtccaaaacctcaaagatgactcagcagtcagcagctcagtggaccccttcaccaacaag
aggccaaaggtgaaagcagagggcgagggattgaggtcggcatcttccctctcaccgaac
catcacagcagcctgctggatctgaaggaggatggggaccatgacaagtgtgtgcaagaa
ccggagatggtctacgagaccaattgtcactgggagggctgcaggagggagtaccagacc
caggaccagctggtccatcacatcaataatgaccacatccacggagagaagaaggagttt
gtgtgccgctgggaggactgctcacgggagcagaagcccttcaaggctcagtacatgctg
gtggttcacatgcgccgacacacgggggagaagccacacaagtgcacgtttgaaggatgc
tcgaaggcctactctcgcctggagaacctgaaaacccacctgcgctctcacactggggag
aaaccatatgtctgtgaacatgaaggatgtaacaaagcattctccaatgcctcagatcgg
gccaagcaccagaaccggactcattccaatgagaagccatatgtttgtaagatccctgga
tgcaccaagcgttacacagaccccagctctctcaggaaacatgtgaagacggttcatgga
cctgaggcccatgtcaccaagaagcaccgtggtgaccagcccccccgaccaccagcacca
aaggagaacagtgaaaacgagtccagtaggagggagatgctccacagggaggacaagatg
tcagggaacagctcccctagatatgtggaggactaccttcatgtcaaatccatcaagact
gagaacacagtgatgtatcagtccagtcctggcggtcagtcatcttgtagcagcgaacca
tcaccacttggcaccaacaatgacagtggagtaaaaacagcagcacaaagcaggggaagc
cagggggacatcaggcccctggatcatcttccctacacgaattccatgggctgtgaagag
acttctgggggggttgcagtagtgggcctttatcccagaaaaaagttcagtaacatccag
tgcctggagcaactcaaaacgaatctgaggagcgtgagggactcgtctcagtggaccaag
aacccaacaccccccgtccacggcatcacgcttccacctataccaacacgcgggcccccc
ctggagtgctcaggagtccgtgtagatccagctttgtactctacttatggtcaactgaga
tctggtaaaaccaacctgctaggagacacttctgagcaccgtgacagcccctccagcacc
cttagtgtggtctacaccctgagcagctgctcctcaggcatctcccctgatttcctcagc
cggcactccagccagacctctaaggctggtgccaacctcctcagcagcatcagctctgcc
gactcctatgaccccatatctgctgatacgtctcggcgttcaagtcagaccaatcagtgt
cgggtccacagtagtggacctgtacacatcagtctactaaacataacccagcactaccat
ctaaaagcaaaatacgctgccgccactgggggtgcaccacctacacctcttccacacatg
gatcggatgaatctgaagtcctgcttggaactttatgaggactcaaagaaatccttgtgt
gcacggagccagatgacccatgaagttccatccaacatccctcgccgtgccagcgcccaa
gagagaatttttgacttgctgaaccatcctcatgtgctgcagtacaacagcatggagact
gtgagcagaggggtgatcatacaaccctgtcctccagatcgccaacactcagcccagaca
ggctgcctgggatctggtgatggtctagatcaatttgcttacatcctgagaacagctgac
atctcaacgacgatcatcaacgagaaagaaacaaataccactcaagatgcaaccaatctg
aatgattttcaaagcactcctaatgtccggcagagcagtactgaggtgctgaagctgcgc
cccttaggcaggggtcaaaccctggccaggacaaccaggggacagtggaacgcatgttct
ttaggactcttggatcccactcaacagaactccaagctgcaagggaacttggctttcctc
caacataatccaacctttggttcttttaatctgacccccaacagagaaatgttccaaagc
ctaaccaacagaggccaacggaactttatacagctcagttctgaaaaaggactgaaccta
ttccaaccgttttccaatctaagtgaagttgctgggccttggtacaggccatgtgaagat
actggtacctttgatgcaaatggaaacccagttgatggcctctgtggaaatatggctgag
gacacaaggagcatacagacctggacacaagaaccagctctgttggactttgtagaactt
aaacatgtgcaggtaaagactgagatctgtgatgtatcaggactgattctagatcagcag
aactgcaatgtaatcttacagaaaatccatccatctaagaatcagaaccatctacaatca
ggaccatcaacaggacctaaatctttgaacccctcagacccagagctgatgcagcaaaca
gactgtggttcaggacatccctgcagcccagaggaccatgctctgctctacatgggtcag
tttcaagtctttgagtccaggggggacctggattgttacggctcaaatgtcaatgtgtct
ccattggaaaatagtgcaccagcctccagttcatgtgaaaaccatctgaagccaactctg
atggacttccaaagcttgcttgatgatggagattattccagccaaatgccagaaacccta
aatcctggactgacccagagtttctcccagagttattcccacccaaccactctaaggaac
ttagtgacactgcctttagtcccgactgggagcgggattattgccttcaggaacatgagt
tcactgctggtggctctggctgaagggaacaagctcctaaacttgaactgttaa
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