Nothobranchius furzeri (turquoise killifish): 107385376
Help
Entry
107385376 CDS
T05163
Symbol
itch
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy homolog
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04120
Ubiquitin mediated proteolysis
nfu04144
Endocytosis
nfu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107385376 (itch)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107385376 (itch)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107385376 (itch)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107385376 (itch)
04121 Ubiquitin system [BR:
nfu04121
]
107385376 (itch)
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107385376 (itch)
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
107385376 (itch)
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
HECT type E3
107385376 (itch)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
SWI-SNF_Ssr4_C
Motif
Other DBs
NCBI-GeneID:
107385376
NCBI-ProteinID:
XP_015814698
UniProt:
A0A1A7ZEY9
LinkDB
All DBs
Position
sgr10:complement(34235547..34253196)
Genome browser
AA seq
864 aa
AA seq
DB search
MKAQLQVTVLSAKLKENKKIWFGPSPYVEVAVDGQSKRTEKCNNTHSPKWKQALTVIVTP
VSKLVFRVWSYQTLKADILLGMATLDISKTLRANDLKLCEVVQTLQLSSDRDPQDVVGDL
SVCLDGMQIDPEAFDLAEREQTSVLNGNTKQNGSSNRSSRDTSPSSDSDEWVIVPSGLAV
PSTDSNSPSPGGSNASRLPRPLPSTPCKPASSPTSSSSSSPSELSEAPASDGSSQASASG
CSDPPDESGTRAAVAVSSQQPSGPKPGSAITAAPAATTPRVTPVNNGPLPPGWEQRVDQS
GRVYYVDHIEKRTTWDRPEPLPSGWERRVDPMGRVYYVDHITRTTTWQRPTQESVRNYEE
WQHQRSQLQGAMQQFNQRFIYGLQDQFAATATKEFDPLGPLPHGWEKRTDINGRVYFVHH
PTRTTQWEDPRTQGLLNDKPLPDGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGKSSLENG
PQITYVRDFKAKVQYFRFWCHQLSMPQHIKITVSRKTLFEDSFQQIMSFHPQDLRRRLWI
IFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFK
FIGRFIAMALFHGKFIDTGFSLPFYKRILNKLLALKDLESIDPEFYNSLIWIKDNNIEEC
GLEMFFSVDKEILGEVTTHELKPDGGNIQVTEENKEEYIRLVAEWRLSRGVEEQTQAFFE
GFNEVLPQQYLQYFDAKELEVMLCGMQEIDLGDWQRNTIYRHYTRGSKQILWFWQFVKEM
DNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPP
YKSYEQLKEKLMFAIEETEGFGQE
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcccaattgcaagtcactgtgctgtcagctaagctgaaggaaaacaaaaagatc
tggtttggtcccagtccatacgtggaggtagcggtggatggccagtcaaagagaactgag
aagtgcaacaacacacacagtcccaaatggaagcaggccctcacagtaattgtgactccc
gtcagcaagctggttttccgtgtttggagctatcagactttaaaagctgacatccttttg
gggatggctactttggacattagtaagactctcagagccaatgatctgaaattgtgtgag
gtggtgcagacgctgcagctgagctctgacagagaccctcaggatgttgttggtgacctg
tctgtctgtctggacggcatgcagatagacccagaagcctttgatttggcagagagagaa
cagacctctgttctaaatggaaacacaaaacaaaatggcagcagcaacagatcaagtagg
gacacgtctccatccagtgactcagacgagtgggtcattgttcccagtggtcttgctgtc
cctagtacagactctaactccccatctccagggggctctaatgcttcacgtcttcccaga
cctttaccttccacgccatgtaaacccgcatcctcacccacctcctccagcagttcttct
cctagcgagctaagtgaagctccagcatcagatggttcctctcaagcttcagcaagcgga
tgctctgacccgccggatgaatcaggaactcgagctgcagtagcagtttcctcacaacaa
ccaagtggtcccaaaccaggcagcgccatcactgctgctccagctgcaacaacgcccaga
gtcactcctgttaacaacggccccctgccaccaggatgggagcaaagagtggaccagagt
ggacgggtgtattatgtggaccacatagagaagaggacaacatgggaccggcctgagccg
ctaccatcagggtgggagcggagggtggacccgatgggtcgagtgtattatgttgaccac
ataacacgaactacgacgtggcagcggcccacgcaggagtcggtgcggaactatgaggaa
tggcagcaccagcgcagccagctccagggagcgatgcagcagtttaaccagaggttcatt
tatgggctccaggaccagtttgcagccacggcaactaaagagtttgacccactgggacct
ctaccacacggttgggagaagagaacagacatcaatggaagagtttattttgttcatcat
ccgactcggacgacacagtgggaggacccgaggacacaagggctgctgaatgataagccc
ctgcctgacggctgggagatgcggttcactgtggatgggattccttattttgtcgaccac
aacaggagaacgacgacctacatcgacccccgcactgggaaatcctcacttgagaacggc
ccacagatcacctacgtcagggactttaaagccaaagtgcaatacttcaggttctggtgt
caccaattgtcgatgcctcagcacatcaagattacggtctcaagaaaaacgttgttcgag
gattcgtttcagcagatcatgagtttccacccccaagatctacggcggcggttgtggatt
atatttcctggagaggagggtctggattacggaggtgtagccagagagtggtttttcctg
ctttcacacgaagtgctgaatcccatgtactgtttgtttgagtatgctggaaaagacaac
tactgcctccagatcaacccagcctcttacatcaaccccgatcacctcaagtacttcaag
ttcatcggccgcttcattgctatggccttgtttcacggaaaattcatcgacacgggtttc
tcgctgcctttctacaaacgcatcctgaacaaactgctggctcttaaagatttggagtcc
atagatccagagttttataattctctcatttggatcaaggataataatatagaagagtgt
ggcctggagatgtttttctctgttgacaaggagatcctgggtgaggtcaccacccatgag
ctgaaaccagatggaggaaacatccaagtaaccgaggaaaataaagaggaatacatcagg
ctggtggcagagtggaggctgtctagaggtgtggaggagcagacacaagccttctttgag
ggtttcaacgaagttcttccacagcagtaccttcagtactttgatgctaaagaactagag
gtgatgctttgtgggatgcaggagatcgaccttggcgactggcagagaaacacgatctat
agacattacactcggggtagcaagcagattctttggttttggcagtttgtgaaggagatg
gacaatgagaagagaatgagacttctgcagtttgtcacaggaacctgtcgtcttcctgtg
ggcggctttgctgatctgatgggaagcaacggccctcagaagttttgcatcgagaaagta
ggcaaagaaaactggcttccacgaagccacacctgctttaatcgcctggacctccctcca
tataagagctacgagcagctgaaggagaagctcatgtttgccatagaagagacggaagga
tttggacaggagtga
DBGET
integrated database retrieval system
