Nothobranchius furzeri (turquoise killifish): 107385644
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Entry
107385644 CDS
T05163
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04010
MAPK signaling pathway
nfu04260
Cardiac muscle contraction
nfu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107385644
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
107385644
04261 Adrenergic signaling in cardiomyocytes
107385644
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107385644
Ion channels [BR:
nfu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107385644
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
Cache_3-Cache_2
MCP-like_PDC_1
DUF2201
Motif
Other DBs
NCBI-GeneID:
107385644
NCBI-ProteinID:
XP_015815169
LinkDB
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Position
sgr01:81705750..81838100
Genome browser
AA seq
1085 aa
AA seq
DB search
MDYSFCLLLFLSAVSSASTNNFPSPQSVKEWVDKMEQDLITLTNTASGLDSLIQIYDDHK
RHFTVESNDATELVRTAAENIEELLANRTKALKRLATEAENFQKEHQWRVDSEANKLFYY
NAKDGINRTALEVKQEKEKEKRNRFIPDDFEFDPAFKRLVSFNTTGVHIPTDIYEGSTII
LNELNWTEALEETFRINKEEDPSLLWQVFGSATGLTRYYPASPWIDTSSSPNKIDLYDVR
RRPWYIQGAASPKDMLILVDASGSVSGLTLKLIKTSVGTMLETLSDDDFVNVVYFNKSAR
PAACFQNLVQANVRNKRTLKNAVLNIKAEGITNYTSGFELAFQQLNQTNVSRANCNKIIM
LFTDGGEEKAEEIFAKYNPNQAVRIFTFSVGQHSYDKGPIQWMACANKGYYYEIPSIGAI
RINTQEYLDVLGRPMVYAHKTSKQVQWTNVYLDALELGLVITGTVPVFNYTGTTPQSKKP
KNQLILGVMAVDVSLEDIKRLTPRFTFGPNGYYFAIDPNGYVLLHPNLQPLTARFDEPVT
LDFLDAELENEIKVEMRRKMIDGERGSYTISTLVKSQDERYIDQGQRTYTFTPVKDTDYS
LALVLPEYSMHYIRAKIDDTITQAKWQTVSESLMADKFDEYGYTFIAPRLYCNDLKPLDK
NTNNTEFLMELNNYIDIKTPNDPNCNRDLVNRLLLDAGITSDLIKIWKGNELQHGVVARF
VATDGGITRVFPKSAGLDWNEEAETYESSFYKRSLDNDLYIFTPAPNNESDGILVSRAVN
LDIKGITLKPAVVGVKLDVEAWMENLIKVAYKQNCKDEICGCMRNDMNIDCVFLDDGGFL
VMSNQDDYNKKIGKFFGTINPSLMRTMVNVSLFTSISTYDYQSLCDPKEKVKSAAGLRSI
YVPSIADILNVGWWATAAAWSIVQQLLVSITFPNFLDAAEMDDDAADAINKDVCITKQTQ
YYFGNKEMSFSGLAETDNFSGFYHAEKLPQTNLVFIISEKTLNSSGNAIPLIQDEQESDG
PDPCEVALNPRYRKGPSFCFDKTENEKNHDCGGVSSLSPTLWLLVILQVALLWVVTDLRH
QAIPS
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggattactctttctgtcttttgctcttcttatcagccgtctcgtctgcctccaccaat
aatttcccatctccccagagtgttaaagaatgggtggacaagatggaacaagatttgatc
acattaacaaacacagccagcggcctggatagcctaatacagatatatgatgatcacaag
cgtcatttcacggtggagtccaacgatgctacagagctggtaaggacagctgctgagaac
atagaggagctcctggcaaatcgtactaaagccctaaagaggctggcaacggaggctgaa
aattttcagaaggaacaccagtggagggtcgacagtgaggctaacaaactcttctactac
aatgctaaagatgggataaacagaacagcattagaggtgaaacaggagaaagaaaaagag
aagaggaaccgattcattccagatgattttgaattcgacccagcctttaaacgactcgtc
tcgttcaacaccaccggcgttcacatccccacggacatatatgaaggctctaccatcatt
ttaaatgagctaaattggacagaagctttggaggaaacgttccggataaacaaagaggaa
gatccctcgctgctctggcaggtgtttggatctgcgacgggactgactcgttactatcca
gcttccccctggatcgacaccagcagctcaccaaataagatcgacctgtacgacgtgcga
aggcgaccctggtacattcagggggcagcttcacccaaggacatgctgatcctagtggat
gcgagtggaagcgtatcaggtctcaccctcaaactcatcaaaacatctgtaggcaccatg
ctggagaccctctctgatgacgactttgtgaacgtggtttatttcaacaaaagcgccagg
cctgcagcatgctttcagaacctggtgcaggccaacgtgaggaacaagaggacactgaag
aatgcggtactgaatatcaaagctgaggggatcaccaactacacaagtggcttcgagctg
gcctttcagcagctcaaccagacaaatgtgtctagagccaactgcaacaagatcatcatg
ctgttcaccgatgggggagaggagaaagcagaggagatatttgcaaaatacaaccccaat
caagcggtacgcatctttacattttctgttggtcagcacagctatgacaaaggaccaatc
cagtggatggcctgtgctaataaaggttattattatgagatcccatctatcggggccatt
cggatcaacacccaggagtacctggatgttttagggagaccaatggtctacgctcacaaa
acttccaaacaagtgcagtggaccaacgtctacctggatgctctggagcttggactagtg
atcaccggaactgtgccggttttcaactacacaggcacaaccccacagtcgaagaagcca
aaaaaccagctcattttgggggttatggctgtagatgtctccctggaggacattaagaga
ctgacccctcggtttacatttggaccaaatggctactactttgctattgacccaaatgga
tatgtgttgctccatccaaatcttcagccactgacggccagatttgacgaacctgttacg
ctcgactttctggacgcagagcttgagaacgagatcaaagtggagatgagaagaaaaatg
attgatggtgaaaggggaagttacacaatatcaacactagtgaaatctcaagatgagcgt
tacattgaccaaggtcagaggacgtacacctttacaccggtgaaggatacagactacagc
ttggctctggtccttccagagtacagcatgcattacattcgtgcgaaaatcgatgacaca
atcactcaggcaaaatggcaaactgtttctgagagcctgatggcagataagttcgatgag
tatggatacacattcatcgcaccaagattgtactgcaatgacttaaagccactggacaag
aacacaaacaacacagagttcctgatggagcttaataattacattgacattaagacacca
aatgatccaaattgtaatagggacctggtgaaccgactgcttttggatgctggcatcacc
tcagacctgatcaagatctggaagggaaatgagttgcagcatggtgttgtggccagattt
gttgccactgatggaggaatcacacgcgtcttccccaaaagcgctgggctggactggaat
gaagaagcagaaacatacgaatcaagtttctacaagcgaagtttggacaacgacctgtac
atttttacaccagcaccaaacaatgaaagtgatgggatccttgtgagtagagcagtgaac
ctggacattaaaggcatcacactcaaaccagctgtggtcggcgttaagctggacgtcgag
gcgtggatggagaacttaatcaaagttgcgtacaagcagaattgcaaggatgagatctgc
ggctgcatgagaaacgacatgaacatagactgtgtctttctggatgatggtggtttcctg
gtgatgtccaatcaagatgattacaataagaagatcgggaaattctttggcaccatcaac
cccagcctcatgagaaccatggtcaacgtgtcgctcttcacctccataagcacctacgac
taccagtcgctgtgtgaccccaaggagaaagtcaagtcggctgcaggcctgcgatccatc
tacgtgccgtcgatagcagatattctgaatgtaggatggtgggccacagctgcagcctgg
tcaatcgtgcaacagctgctggtcagcatcacgttccccaattttctggatgcggctgaa
atggacgatgatgcagcagatgccataaataaggatgtatgcatcactaagcaaactcag
tactactttgggaacaaggagatgtctttcagtggtcttgcagaaacggacaacttctct
gggttttaccacgccgaaaagctgccccagacgaacctggtcttcatcatcagtgaaaaa
acactgaatagctcaggaaacgcaattccgttaattcaggacgaacaggagtctgacggg
ccggatccttgtgaagtagctctcaatcctcgctacaggaaaggaccttcgttttgtttt
gataaaactgagaacgagaagaaccatgactgtggtggggtctccagcctgagtcccact
ctctggctgctggtgatccttcaggtggccctgctctgggtcgtgactgacctcaggcat
caagccatcccatcgtga
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