Nothobranchius furzeri (turquoise killifish): 107386363
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Entry
107386363 CDS
T05163
Name
(RefSeq) short transient receptor potential channel 6-like
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107386363
Ion channels [BR:
nfu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107386363
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Ank_4
Ank
Ank_5
YVC1_C
DUF6744
Motif
Other DBs
NCBI-GeneID:
107386363
NCBI-ProteinID:
XP_015816189
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Position
sgr11:13021055..13035557
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AA seq
877 aa
AA seq
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MNHRPLAAGSCPAGDARSSRARSRDNLLSYDDFGEEFCCAGRCLGCDRQLTCRLSAAKRR
QALRGPAYMFSAPSFSLSEVEQRFLEAAEYGNIPEVRRMLLHMPNLNVNAVDYMGQNALQ
LAVANEHLEVTELLLGRTDLARVGDALLLAISKGYIRITEALLSHPSFRDANRLTASPAQ
VDMMDDFYAYDEDGTRFSHDVTPVILAAHCQEYEIVHTLLSKGARIDPPHDYFCGCDSCN
YHQQYDSFSHSRSRINAYRGLASPAYLSLFNEDPVLAALELSNELAMLADIEKEFKNDYS
RLSNQCKDYVVGLLDLCRSTEEVEAILNGETFCEDTFDVAGRPPLTRLKLAIKYELKKFV
AHPNCQQQLLSIWYENLPGLRQQTTAVKLLVVLAVAVGLPGLAVAYWVTPCSRVGKVLRS
PFMKFVAHASSFTVFLGLLILNAADRFAGTTILPNMTHHQQQPGGLQFKSDPLLLYRKTT
TPFTWMEILIISWVMGMIWAEVKEIWSQGPEEYLVELWNFLDFGMLAIFLASFSCRFSAM
KRADLAQSFVYQHNKTLDKLPPEVEYFTKARIHWMPSDPQLISEGLYAIAVVLSFSRIAY
ILPANESFGPLQISLGRTVKDIFKFMVIFLLVFLAFMIGMFNLYSYYLGAKQNDAFTTLE
ESFKTLFWAIFGLSEVKSVVINNGHKFIENIGYILYGVYNVTMVIVLLNMLIAMINSSFQ
EIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSTLRLVTAMKSKLKQLVHRSR
EKNPGTQLNQLGERKKSVYGSSDNGTRYQKIMKRLIKRYIIKAQANRESDEITEGELKDI
KQDISSLRYELLEEKSQNMETLDVLLGRLGQIGPSSS
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacagaccgctggctgctgggagttgtccagctggtgatgcccgcagctccaga
gcccggagccgggacaacctgctcagctacgatgactttggagaggagttctgctgcgct
ggacgatgtctgggctgtgacaggcagctcacttgtcgcctcagtgctgctaaacgacgc
caggccctgcgaggtccagcctacatgttctctgctccctccttcagtctgtcagaggtg
gagcagcgtttcctggaggcagctgaatacggcaacattccagaggtgcgccgcatgctg
ctccacatgcccaacctgaacgtcaatgctgtggattacatgggacaaaatgccctgcag
ctggctgtggccaatgaacatctggaggtgacggagcttctgctggggaggacagactta
gccagagtgggtgatgccctcctcttagccatcagcaagggctacatccgtatcacagag
gccttgctcagtcatccttcattcagagacgctaatcgtctgacagcgagccccgcccaa
gtagacatgatggatgacttctatgcttacgatgaagatggaacaaggttttctcatgat
gtgactccagtcatacttgcagctcactgtcaggagtatgagatcgttcataccctgctg
agtaaaggcgcccgcatcgatcctcctcatgattacttctgtggctgcgactcgtgtaac
taccaccagcagtatgactcgttcagccactcacgctcaaggatcaacgcctacaggggt
ctggccagtcctgcttacctctctctattcaacgaggacccagtgttggccgctctggag
ctcagcaacgagctggccatgctggctgacattgagaaagaatttaagaatgactacagt
cgtctgtcaaaccagtgtaaggattatgtagtgggtcttctggatctgtgtcgcagcaca
gaggaagtggaggccatcttgaatggagaaacgttctgcgaagacaccttcgatgttgcg
ggtcgaccccctctcacaagactcaaactagccattaaatatgaacttaaaaagttcgta
gctcatccgaactgtcagcagcagctgctgagtatctggtatgagaacctgcctggtctg
agacaacaaactaccgctgtcaagctgctggtggttctggccgtggctgtcggactgcct
ggactggctgtggcttactgggtcactccctgcagcagagtgggaaaagttttgcgcagc
cccttcatgaagtttgtggcccatgcctcatccttcacagtatttctgggtctgctgatc
ctgaacgccgctgaccgttttgcaggtaccaccattttgccaaacatgacccaccatcag
cagcaacctggaggtctccagtttaagtctgatccattgctgctctaccgtaaaaccacc
acccccttcacctggatggagatcctcatcatttcctgggtcatgggtatgatttgggcg
gaagtgaaagagatctggagtcagggaccagaagaatacctggttgaactgtggaacttc
ctggactttgggatgttggccatatttttggcttcgttcagctgtcgcttctctgctatg
aaacgagctgatttggcccagagctttgtttaccagcacaacaaaactctcgacaaactg
cctccagaggtggaatacttcaccaaagcacgtatccactggatgccatcggatcctcag
ctcatatcggaaggcctttacgccatcgcagtggtgctgagcttctctcggattgcttac
atccttccagccaatgagagctttggtcctctccagatctccttagggagaaccgtcaaa
gacatcttcaagttcatggtcatcttcctcctagtctttctggcgtttatgattggcatg
ttcaacctgtactcttattacctgggagcgaagcagaatgatgccttcaccactctggag
gagagcttcaagacgttgttctgggccatatttggactgtctgaggtcaaatctgtggtg
atcaacaatggacacaagttcattgagaacattggttatatactgtacggggtttacaac
gtcaccatggtgatagtgctgctcaacatgctcatcgctatgatcaacagctcctttcag
gagatagaggacgatgcagatgttgagtggaagtttgctcgagccaaactttggttttcc
tattttgaagaaggaagaacgcttcctgtacccttcaatctggttcccagtcccaaatcc
acactgaggctggtaacggccatgaagtccaaactcaagcagcttgttcacagaagcagg
gagaagaatccagggacacaactcaatcagcttggggagagaaaaaaatcagtatatgga
agttctgacaacggcacaagatatcaaaagatcatgaagcgcctgatcaagcgttacatc
atcaaagctcaagcaaaccgagagagtgacgagatcactgaaggagagctgaaagatatc
aagcaggacatctctagtctgagatacgagctgctggaggaaaagtcccagaacatggag
acactggatgtactgttgggaaggctgggacagatcggcccatcttcatcctga
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