Nothobranchius furzeri (turquoise killifish): 107386518
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Entry
107386518 CDS
T05163
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04110
Cell cycle
nfu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
107386518 (rb1)
04218 Cellular senescence
107386518 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nfu01009
]
107386518 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107386518 (rb1)
Protein phosphatases and associated proteins [BR:
nfu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107386518 (rb1)
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
107386518 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
KxDL
Thiol_cytolys_C
Motif
Other DBs
NCBI-GeneID:
107386518
NCBI-ProteinID:
XP_015816441
UniProt:
A0A8C6LP48
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All DBs
Position
sgr11:complement(16898324..16916312)
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AA seq
915 aa
AA seq
DB search
MPPKKRHSGMVHNKQPKSGADNASPDKDSPELSEKEHRDKDGEFVSLCKSLHVTGLVCDR
AWSLWKIVQESMEIVKDRQLKLWGACLFVTVTDMDVGCFTLTQILKAISMNFKLFMELVR
QMDLNLDTISTKVNSVLTRLEKKYDVLLALYQRFEKTCKKIFTSTTYGKERETMQTCWTV
FLLAKGRTLQMEDDLVISFQLLLCTLELFIKRCSPDLLQPLYQSSINKVPTRASRRSQNK
AKSRPAELELDVQLLETLCKENECSLEEVKNVYQTSFLAFLESLDLSRSPDFPQVSDFNQ
QYEEHYLKSRDIDGRLFLDGDETLVAPKVEISQVERTPKKSQPDEDEILIPPETPVRAAM
TSIRMLRGDLPSSGDQPSTNLATYFKNCSVDPTQDVQKRLETLGQMFSQKFGEAVGPRGV
VYGRQRFALGVRLYYKVMEAMLKSEEKRLSVQNFSKLLNDSTFHTSLLACALEVVMATYE
ESSFKNGRYNVGGGDQAGTDVCFPWILNVFNLPAFDFYKVIESFIKAEPTLSKDIIKHLE
TCENLIMERIAWRTGSPLFELLKQERGSGAEEQVETPGSFSQPLQHNHTAADLYLSPMRA
GQWVSPPESPVKPVCKSAPVASSNPASQAPGQVPRHSKSNSLSLFYKKLYCLAYTRLKTL
CSYLLSSHPELEPIIWTLFQHTLQHEYELMRDHHLDQLMMSAMYAICKVKSVDLRFKSIV
SAYKNLPNTNQETFKHVLITEGQYDSIIVFYNQVFMQKLKTNILQYASTRPPPLSPIPQI
PRSPYKFPNSPLRVPGSNNVYISPMKSSRVSPGIITPRSRMLVSIGESFGLSNRFQKINQ
MVSSDRSHKRTLDLGSTPKPLKRLRFDIDGQDETDGSKPGEDSTLIQKLTEMSSTRSRMQ
EQKLKEDAESRKESL
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgccacctaagaaacgtcactccgggatggtacacaacaagcagccgaagtccggagct
gacaacgcctctccagacaaggacagtccggaattatctgagaaagaacacagagacaag
gatggagagtttgtgagtctgtgtaagagccttcatgttactggcctggtgtgtgaccgt
gcctggtccttgtggaaaatagtgcaggaatccatggagatcgttaaagatcgtcagcta
aagctttggggtgcttgtctgtttgtgactgtaacagacatggatgttggctgtttcacc
ttgactcagatcctaaaagctatcagtatgaattttaaactcttcatggaactggtgagg
cagatggatttgaacttggatacgataagcaccaaagtgaactctgttcttacacgactg
gagaagaaatatgatgtgctgttagcgctctaccagaggtttgagaaaacctgtaagaag
atctttacctcgaccacgtatggcaaggagagagagacgatgcagacatgctggacagtg
tttcttttggccaaaggaaggacgttgcagatggaggatgatctggtcatatcgttccag
ttgctgctttgcaccctggagctgtttatcaagcgctgctctccagaccttctgcagcct
ctttaccaatcttccattaacaaagtgccaacacgagcgtctcgtcggagccagaacaaa
gccaaatccaggcctgcagagctggagcttgatgttcagcttcttgaaactttgtgcaaa
gagaacgaatgcagtttagaagaggtgaagaatgtttaccagaccagcttcttggcattt
ctagagtccctggatctgtctagatctccagattttcctcaggtttctgacttcaaccag
cagtatgaggagcactacctcaagtccagagacatcgatggacggctgtttttggatgga
gatgagactcttgttgctcctaaagttgagatatcacaagtagagagaacaccaaagaag
agccagccagatgaagacgagattctgatccctccggagactcccgtcagagctgccatg
acatccatccggatgctgagaggagacctcccctccagtggagaccagccttctactaac
ctggctacatatttcaaaaactgctctgtggacccgacacaggatgtgcagaagcgtttg
gagacgcttggacagatgttcagccagaagtttggtgaggctgttgggccacgcggtgtt
gtgtacggtcggcagagatttgctctcggtgtacgactttattacaaagtcatggaggcc
atgctgaaatcggaagagaagcggctttctgttcaaaatttcagtaaactcctcaacgac
tccacgtttcacacatccctgctggcttgtgctttggaggtcgtcatggcaacatatgaa
gaaagcagttttaaaaatggaaggtacaacgttggaggaggggaccaggctggaacagac
gtgtgtttcccctggatactgaacgtgttcaacctgcctgcctttgacttctacaaggtc
atcgagagcttcatcaaagcggaacccacgctcagcaaagatatcatcaaacatctggag
acctgtgagaacctcatcatggagaggattgcatggagaacgggatccccgctgtttgag
ctcctgaaacaggaacgtgggagtggagcagaggagcaggtggagactcccggcagtttc
agccagccgctgcagcacaaccacaccgctgcagacctatatctgtcaccgatgcgagcc
ggccagtgggtttcgcctcctgagtcccccgtgaagcccgtgtgcaagtctgcccccgtg
gcttcctccaaccccgcctctcaagctcctggtcaagttccacgacattccaagtccaac
tccctaagcctcttctataaaaaattgtactgcctggcgtacaccagactaaagacgctc
tgctcctacttgttgtcctctcaccctgaactggagcccatcatctggaccttgttccag
cacactctgcagcatgagtacgagctgatgagagaccatcacctggaccagttgatgatg
tcagccatgtatgccatatgcaaagtgaagagtgtcgatctgcgcttcaagtccatcgtg
tcggcgtacaagaacctgcccaacaccaaccaagagacatttaaacacgtcttgatcact
gaaggccagtacgactccatcatcgtcttttacaaccaggtgttcatgcagaagctaaaa
accaacatcctgcagtatgcatctaccaggccgccccccctctctccaatcccacaaata
ccacgcagtccctataagttccccaactcgcctctgcgtgttcctgggagcaacaacgtt
tacatttctcccatgaagagctctcgcgtgtccccgggtattattacacctcgctccaga
atgctggtatcaatcggggaatcgtttgggctgtccaatcgcttccagaagatcaaccag
atggtcagcagcgatcgctcccacaagaggaccctggatctgggatctactccaaaacct
ctgaagaggctccgcttcgacatcgacgggcaagacgaaactgacggcagcaaacctgga
gaagactcaactctgatacagaagctgacagagatgagctccactcggagtcgcatgcag
gagcagaagctgaaggaagacgccgaatccaggaaggagtcactttaa
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