Nothobranchius furzeri (turquoise killifish): 107386969
Help
Entry
107386969 CDS
T05163
Symbol
smpd1
Name
(RefSeq) sphingomyelin phosphodiesterase
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu00600
Sphingolipid metabolism
nfu01100
Metabolic pathways
nfu04142
Lysosome
nfu04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
107386969 (smpd1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107386969 (smpd1)
09143 Cell growth and death
04217 Necroptosis
107386969 (smpd1)
Enzymes [BR:
nfu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
107386969 (smpd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
ASMase_C
SapB_1
Motif
Other DBs
NCBI-GeneID:
107386969
NCBI-ProteinID:
XP_015817164
UniProt:
A0A1A8UGK4
LinkDB
All DBs
Position
sgr11:34618560..34626290
Genome browser
AA seq
596 aa
AA seq
DB search
MKLHALFPFLGLMTCTLLLRGPSLGSGHPVQSLEQTRIRFLEQVDRLGLAFNWRNLTCPA
CKVVFTLLDIALLSNANEERVAHVVSEACVRLHLSDKLVCREIIELFRDDFIRALQQSFL
WPTEACALLVGPSCGTFDIYAPWNITLPKVPKPPVTPPSPPKPGSPQSRVLFLTDIHWDK
EYQAGSAADCKEPLCCRNSSGFPGKRQSLAGHWGTYSNCDLPFHTVESLLENAARAGPWD
WVYWTGDIPAHNVWSQTRNQQLTELTVISKLVRKHLGPKVTVYPAVGNHESTPVNIFPPP
FVHGNRSSAWLYDKMAEEWASWLPEQALKTLRYGGFYTATIQPGLRVVSLNMNFCARENF
WLMVNSTDPANQLQWLVQVLQASEDKGEKVHVIGHIPPGLCLSSWSWNYYHIVNRYESTI
TGQFFGHTHLDEFQMFYDEKTMTRPLGVAFIAPSATTFVNLNPGYRVYYVDGNYQTSSRL
VLDHETYILNLTVANHSPEKNPEWTLLYRATKAYSLPTLFPSDHHALLQNFVKDDHVFQK
FWHLRHKGHTSESCIETCKTALLCFLRSGRYDELQQCDHLNGFGGTLVRASLKTLC
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccacgcgctgttcccgtttctggggttgatgacctgcactctgctcctaagg
gggccgtcgctggggtcgggtcacccggttcagtcgttagaacagaccagaatccggttc
ctggagcaggtcgatcgcctcgggctcgccttcaactggaggaatctaacctgccccgcg
tgcaaagtggtcttcacccttcttgatatcgcccttctgagcaacgcgaacgaagagcga
gtggcgcacgtggtcagcgaggcgtgcgtccgcctccatctgtccgataagttggtgtgt
cgggaaataatcgagctgttcagggacgacttcatcagggcactgcagcagtccttcctc
tggcccactgaagcgtgcgccctgttggtgggcccttcctgtggcacgtttgacatttac
gctccttggaacatcactttgccaaaggttcccaaaccccctgttacaccgccttctcct
cccaaacccggttctccgcagagccgggttctgtttcttacagacatccactgggacaag
gagtatcaagccggcagcgccgcagactgcaaggaacctctgtgctgtcgcaacagctcg
ggcttccccgggaagaggcagagcctggctgggcactggggaacctacagcaactgtgac
cttccctttcacactgtggagagcctccttgagaatgccgccagagccggaccttgggac
tgggtctactggaccggagacataccagcacacaatgtttggtctcagaccaggaatcag
cagctgactgaacttacagtcatctccaagctcgtccgcaaacacctgggacccaaagtg
acggtctaccctgcagtaggaaaccacgagagcacaccagtgaacatctttccaccacct
tttgttcacgggaacagatcctccgcctggctttatgataaaatggcagaagagtgggca
tcatggttgccagagcaggctctgaagaccctgagatacggtgggttctacactgcaacg
attcagccgggtctgagggtggtctcgctcaacatgaacttctgtgctcgagaaaacttc
tggctgatggtgaactccaccgatcctgctaaccagctgcagtggctggtccaggtcctc
caggccagcgaggataaaggcgagaaggtgcatgtcatcggtcacatcccacctggcctg
tgtctcagcagctggagctggaactactatcacatagtcaacaggtatgaaagtacaatt
acaggccagttttttggtcacactcatctggatgaattccaaatgttttacgatgagaaa
accatgacccggccattaggagtggccttcatcgcccccagtgccaccacctttgtcaac
ctcaacccagggtatcgcgtgtactacgttgatgggaattaccagaccagttctcggctg
gtgctcgaccacgaaacctacatcctcaacctcacggtggccaatcacagtccggaaaag
aaccccgaatggactcttctgtaccgtgccaccaaagcgtacagtcttcccactctgttc
ccgtcggatcaccatgcactgttgcagaacttcgtcaaggatgatcacgtgttccagaag
ttctggcaccttcgacataaaggacacacgtccgagtcctgcatagagacctgcaaaacc
gcactgctctgcttcctgcgaagcggacgctacgacgaactgcagcagtgcgaccacctc
aacggctttggaggaacgttggttcgggcttcgttaaaaactctgtgctga
DBGET
integrated database retrieval system
