Nothobranchius furzeri (turquoise killifish): 107387647
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Entry
107387647 CDS
T05163
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04140
Autophagy - animal
nfu04142
Lysosome biogenesis
nfu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
107387647 (plekhm1)
04140 Autophagy - animal
107387647 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107387647 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107387647 (plekhm1)
Membrane trafficking [BR:
nfu04131
]
SNARE
SNARE associated proteins
Others
107387647 (plekhm1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
107387647
NCBI-ProteinID:
XP_015818226
LinkDB
All DBs
Position
sgr12:complement(14873558..14889182)
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AA seq
1069 aa
AA seq
DB search
MLATQMPETPLEAKDTKQIKERLAQSLKALQKRYITSDAVVTSDDGDANLLCCALEAIFI
HGIKSKCIRSEAGGRSRKGDRGPLPQPFFWSLLKTVTHRDVITELEKISFLCTDVGRCRA
WLRLALNHGLLECYLASLFREDSKLRAHYQPSALLLNEEEREVLLSYVQGLASLTFNLSY
KSAVLNEWTTTPLALAGLCPLSQVEVLAPSVNGGDHTNFKPTRKESWDTASQSSGSSEAV
DVQKVCPVVPSKTTAESREERTGLHSSNLSLDTTGSSHLSSSLSSDSLLQGQDPRSPTGD
QWSSGDLDESVSISTRRLQKDLLVDFCESGQCSQDSMREDSFVSSTGADPFSEIANFSSS
YSEIQSHQMPSQDLVERLPNSFIQLPTAEEQTEIQGVTSDLPSETEVVPSVSKPLQPTGE
QQVAGVQETAEPVQEMKQADNLKKPNTEFLSRRASQRSATIASRKLSLDSLSHSHSWISD
DDIYKPDLEQVSDSDEVSPVPIAEPSHCQSPPSVVHRRQIGLSNPFRGLLKLGHLERRSA
MAIWRDYYCELSPFEFRLYLNAEERTCCDNCSLLRCEDVRISSEGRFELIFSGKRLYLRA
ANRDEAEDWVDRIVEAVNKCRPAAHADEQWEVLQSLRENGVDERALSSPSSASSSPERHF
SSSDTNGRQQAASPQEFIWTRTTELETDALKEAVLYFSTDSEARTWRPLVFSLSLEALKS
FRVQEGKKLLWLTHPIEEIRDVVPDVSQGGAAFFKVLTVKESLRLRAENSEEARSWRDLI
RGALDSYLESGEDGHPEEPAPVWSTGVTGNLHRLVQHRLKEDGAFLVHLYTVPSEKGLDT
QNFKCAGCPQQIGPSLGKARLCEFSGQYYCDNCHKGDTTIIPSRMLHNWDLTHREVSKRA
LCLLAQVEQEPLLNLEQLNPELVTHSESMTQAHTLREKLRLLGDYLLSCRSGACKKLQAR
MGQRTYLLESSHLYSVMDLRQIAESQYAIFLDPLVQHASNHVLNCDLCTQRGYICQICHS
EDIIFPFQFESIIRCTACKAVFHRSCKSTTDSCPRCQRMKKYLERNLQE
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccacacagatgccagaaacaccactagaggccaaagataccaaacagattaaa
gagaggttggcacagtctctcaaggccctgcagaaacgttacataacatcggatgctgtg
gttaccagtgacgatggggatgctaacctcctctgctgtgccctggaggccatcttcatc
catggaatcaagagtaaatgcatccgctctgaagctggaggccggagcaggaagggcgat
cgaggccccctccctcagccttttttctggagccttcttaagaccgtcactcaccgagac
gtgatcacagagctggagaagatcagtttcctctgcacagatgtgggtcgctgccgagcg
tggctgcgcttggcactcaaccacggcctgctggagtgctacctcgcctctctgtttcgg
gaggactccaagctgcgcgcccattaccaacccagtgccttgcttctgaacgaagaggag
cgagaagttctgctcagctacgtccagggtctagcctcgctcacgtttaacctgtcttac
aagtcagctgttctcaacgaatggaccaccacccctctggctcttgctggactgtgcccc
ctgtctcaggtggaggtacttgccccgtctgttaatggcggagaccatactaacttcaag
ccaacacgtaaagagtcatgggacacagcgtcccagtcatcaggctcgtccgaggctgtg
gacgtgcagaaagtctgcccggttgtgccgtcaaagacgacagcagagtcacgagaagaa
agaactggacttcactcatctaacttaagtctggacacgacagggtcctcgcacctgtcc
tccagcttgagctctgatagccttctgcagggtcaggacccccgcagccccacaggggac
cagtggtcgtcaggtgacctggacgaatccgtcagcatcagcaccagaagacttcagaaa
gatttactggttgatttctgtgagagcggtcagtgcagtcaggactccatgcgagaagac
tcgtttgtctccagcacaggagctgatcctttctcagagattgccaatttcagcagttcg
tacagcgaaatccaaagtcaccagatgccgtcccaagatttggtggagcggctcccaaat
tccttcatccagctgccaacagctgaggagcaaactgagatccagggtgtaacctctgat
ttaccatcagaaaccgaggtggtcccttcagtcagcaagccccttcagcctacaggggag
cagcaagtggctggtgttcaggaaactgcagagccggtccaggaaatgaagcaagcagac
aatttaaagaagcccaacacagaatttctgtcacgcagagcatctcagcgttctgcgacc
atcgctagcaggaaactctccttagattcactgtcacattctcattcttggatttctgat
gacgacatctacaagcctgacctggagcaagtgtcagacagtgacgaagtgtctcctgtt
cctatagctgagcccagtcattgtcagtcccctcctagtgttgtccatcgcagacagata
gggctgtccaacccctttcgaggcttgctgaagcttggtcacctggaacgacggagcgcg
atggcaatttggcgcgactactactgcgaactctccccctttgagttccgtctgtatctg
aacgctgaggagcggacatgctgcgacaactgctccctgctgaggtgcgaagacgttcga
atctcatcagaaggtcgctttgagttgatcttttctggaaagcggctttatctccgagca
gccaatcgcgacgaagctgaagactgggtggaccgcatcgtagaagctgtgaacaaatgc
aggcctgcggctcatgctgacgagcagtgggaagtgcttcagtccttgagggaaaacgga
gtggatgagcgcgcgctttcctctccgtcctctgcttcctccagccctgagcgacacttc
tcttcctctgacacaaacggccgacagcaggccgcttcccctcaggagttcatctggact
cgcactacagaactggaaaccgatgctctcaaagaagcagtcttgtatttctccacagat
tctgaggccagaacatggagacctctggtcttttccctctccttggaggctctgaaaagc
ttccgggtgcaagagggaaagaagttgctgtggctaactcatcccattgaggagatccgg
gatgttgttcctgatgtctcccagggcggagcagcatttttcaaagtcctgactgtgaaa
gagtctttgagattaagggcagaaaactcagaggaagcccgctcctggagggatctgatc
cggggagctttggactcgtacttggaaagtggggaggacggacatcctgaggagcctgca
ccagtttggagcactggagtgactggtaatctgcacaggctggtgcaacacagactaaag
gaagatggagcttttctggttcatctttacacagttccctcagagaagggcttggacaca
cagaacttcaagtgtgcaggctgtcctcagcagatcggcccctcgctgggcaaagccagg
ttatgtgagttctcaggacagtactactgtgacaactgccacaagggggacaccaccatc
attccctcccggatgctgcacaactgggatctcacacaccgagaggtgtcaaagagagct
ctttgtctgttggctcaagtagaacaggaacctctgcttaacctggagcagctgaaccct
gagctggtgacacactcggagtccatgactcaggcccacactctgagagagaagctgcgt
ctcctgggcgactacctgctctcctgccgcagcggagcctgcaagaaactccaagcaaga
atgggccagcgaacatatctgctagagtcgagccatctttacagcgtcatggatctaaga
cagatagcagagagccaatatgcaatcttccttgacccactggtgcagcacgcctctaat
cacgtgctgaattgtgacttgtgcactcagcgtggctacatctgccagatatgtcactcc
gaagatatcatctttccctttcagttcgaaagcattatcaggtgcacagcctgtaaagcc
gtattccaccggtcctgcaagtccaccactgattcttgtccacgctgtcaaagaatgaag
aagtacctggagaggaatctgcaagaatga
DBGET
integrated database retrieval system
