Nothobranchius furzeri (turquoise killifish): 107387652
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Entry
107387652 CDS
T05163
Name
(RefSeq) sodium channel protein type 4 subunit alpha A-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107387652
Ion channels [BR:
nfu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
107387652
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GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
107387652
NCBI-ProteinID:
XP_015818233
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All DBs
Position
sgr12:complement(14919207..14965384)
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AA seq
1891 aa
AA seq
DB search
MATLLPCPGTDVFRPFTRESLVEIERLAEERRNAAQVEKEDGEPEAPHRDLEAGKNLPLI
YGDPPPERLNTPLEDLDPFYKTHKTFIVITKGNTIYRFNAEPACYMLSPFSLIRRGAIKI
LIHSLFSMFIMLTILSNCVFMTMSNPPAWSKTVEYIFTGIYTFEATIKVLSRGFCAGSFT
FLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSV
KKMSDVMVLTVFALAVFALIGLQLFMGNLRQKCIRWPILMNETEFFITTSDFNDTFNFST
MNDTVYSNSTFNFTEYIENPDNQYFLEGSKDALLCGNSSDAGKCPEGYTCIKAGRNPNFG
YTSYDTFGWAFLSLFRLMTQDFWENLFQLTLRAAGRTYMLFFVVVIFLGSFYLINLILAV
VAMAYDEQNQATQQEAIEKEAEFQRLLEQLKNQEQAQIHGSRATLASQKSASEKADDEKT
SSHGETVKDCNGRIIPQLLIRAPTMDESAVDYELKGKSSDSLHSTLHVDQQGLKQRSASA
TTMLSAIAIEELEEAQRPCPPCWYKFADIFLKWDCCVPWVVFKKWVHFVVMDPFVDLAIT
ICIVLNTLFMAMEHYPMTPEFDDMLSVGNLVFTGIFTAEMVFKLIAMDPYYYFQVGWNIF
DSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTL
VLAIIVFIFAVVGMQLFGKSYKDCVCKISSDCELPRWHMNDFFHSFLIVFRILCGEWIET
MWDCMEVAGPAMCFIVFMMVMVIGNLVVLNLFLALLLNSFSGDNLSGVDDDGEMNNLQIA
IGRITLGINWFKAFVVQKVQQILGRKPKEPDEGPADGADAKTEGIEMNHLETCQAFNVAD
GLLVCLVEGQPSGFIVDGDASLNVPIAEAESDFENLSEYDQDDDDDDEQDVADKADNFER
TNERDIQQTTRNSEDVISISENIKLIGSVKEDDASVCSTADYEPEPEPVEEEEIIDPVEP
ETCFTDKCVLKWPCLTVDITDGKGKKWWNLRKTCFTVVEHDWFETFIIFMILLSSGALAF
EDIYIERRQTIKIILEFADKIFTYVFVIEMLLKWVAYGFKTYFTNAWCWLDFFIVDISLI
SLVASWMGYSDLGPVKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIF
WLIFSIMGVNLFAGKFYRCINTTTEELFPISEVNNRSECLALREATQEARWINIKVNYDN
VGQGYLSLLQVATFKGWMDIMYAAVDSREVGEQPSYEINLYMYLYFVIFIIFGAFFTLNL
FIGVVIDNFNQQKKKFGDKDLFMTDEQKKYYEAMKKLGSKKPPKPIPRPKNPIQGLVFDF
ISQQFFDIFIMILICLNMVTMMVETDDQSPEKEDFLFKLNVAFIVVFTGECVLKLFALRQ
YFFTNGWNIFDFIVVILSIAGTMLSDLIEKYFVSPTLFRVIRLARIGRILRVIKGAKGIR
TLLFALMMSLPALFNIGLLLFLIMFIFSIFAMSNFAYVKKEAGIDDIFNFETFGGSIICL
FQITTSAGWDGFLLPMLNREPPDCDPTFENPGTDVKGNCGSPVIGMVFFCSYIIVSFLVV
INMYIAIILENFNVAQEESGDVLCEEDFEMFNETWEKFDLNGTMFIKFSQLSEFCDTLQE
PLRVPKPNRFHLIEMDLPLVIGDRIHYLDVLLAVTQMVLGDTVEMAAMQKSIEMNFTLSN
PKNDSFAPVITTVRHKEELMSSFIIQRAYRRHLLKRCIHHAAFMHRSKTMGRKGGGDDSP
EKEGLLARRMGVLYGSNTDLAEEMERLDLQALANQEHLNTEVILCCDEAKCHQEPSEPHI
VVPVELTNEVLLYSAPDQHLLTLSILKESSV
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctgctcccttgccctggcaccgatgtcttccgcccctttacccgggaatct
ctggtggaaatcgagaggctcgcggaggaaaggaggaacgcagcacaagtagaaaaggag
gacggagaaccagaggctccacaccgtgatctggaggctgggaagaatctgcctcttatc
tatggagaccctcctccagagcggctcaacacacctctagaggacctggaccccttctac
aaaacacacaaaacattcattgtgatcactaaaggaaacaccatctacaggttcaacgct
gagccggcttgttacatgctgagcccctttagtttgatcaggagaggagccatcaaaatt
ctcatacattcattatttagcatgtttatcatgcttacaattctctccaactgtgtgttc
atgacgatgagcaacccaccagcatggagtaaaacggtcgagtatattttcactggtatt
tatacttttgaggcaacaatcaaagtgttgtccagaggtttctgtgctggttcttttaca
ttccttcgagatccctggaactggctggatttcatggtgatcagcatggcttacatcact
gagtttgttgatcttggcaacgtgtcggccctcaggacgtttcgtgtacttcgagcccta
aaaacaattactgtgatccctggtctgaaaacaatcgtgggcgcgttgatccagtcggtg
aagaaaatgagtgacgtcatggttctgaccgtcttcgccctggcggtctttgccctcatc
ggccttcagctttttatgggaaacctgcgtcagaaatgcattcgctggcccattctgatg
aatgaaactgaatttttcattaccacctctgattttaatgacacattcaacttcagcacc
atgaatgatacagtttattccaacagcactttcaattttactgaatatatagagaaccca
gacaatcagtattttctggagggtagcaaagatgctcttctatgtggtaacagctctgat
gctggaaagtgccctgaaggatacacatgcataaaagcagggaggaaccccaactttggg
tacaccagctatgacacttttggctgggcctttctgtccctcttcagactcatgacccag
gacttctgggagaaccttttccaactgacgctacgagcagcaggaaggacatacatgctg
ttcttcgtggtggtcatttttctgggctccttctacctcatcaacctcatcctggctgtg
gtagccatggcttatgatgaacagaatcaagcaacacaacaggaagccattgaaaaagag
gcagaattccaacgtctgctagagcaactcaaaaatcaagagcaggctcagattcatgga
agtcgagcgactctggccagtcaaaagtccgcgtctgaaaaagcagatgatgaaaagact
tcctcacatggtgagactgtaaaggactgcaatgggaggatcatccctcagttgctgatc
agagcgcccaccatggatgagtctgctgtagattatgaactcaagggcaagtcatcggac
tcgctgcacagcacgcttcatgtggatcagcaaggcctgaaacaaagatctgcgagtgct
acgactatgctttcagccattgctattgaagagttggaggaagctcagaggccgtgtcca
ccatgctggtacaagtttgcagacattttcttgaagtgggactgctgtgtgccctgggtt
gtctttaaaaagtgggtacactttgtggtcatggacccttttgttgacctggcgatcacc
atctgcattgtgctcaatacccttttcatggccatggagcattacccaatgaccccagag
tttgacgacatgctctcagtaggaaatctggtttttactgggattttcacagctgagatg
gttttcaagctaatcgccatggacccttactactattttcaagttggctggaacattttt
gacagcatcattgtcactctcagcctggtggagttggggttggcaaatgtccagggtctg
tcagttcttaggtcctttcgtttgctgcgtgtcttcaaactggcaaaatcctggcccacg
ctcaacatgctgatcaagatcatcggtaactctgttggagctttgggaaaccttactttg
gtgctggccatcatcgtcttcatttttgccgttgtgggcatgcaactttttggaaagagc
tacaaggactgtgtttgcaagatctcatcagactgtgagctgccacgatggcacatgaat
gacttcttccactcattcctcatcgtattccgaatcctgtgtggagaatggattgagacg
atgtgggactgcatggaggtggccggacctgcaatgtgttttatcgtcttcatgatggtc
atggttattgggaatctagtggtgttgaacctttttctggccttgctgctcaactcgttc
agtggagacaacctctcaggagtggacgacgacggagagatgaacaatctccaaattgcc
atcggcaggatcacattgggcatcaactggtttaaagcatttgttgttcaaaaagtccag
cagattcttggccgaaaacccaaggagcccgacgagggcccggctgacggagcagacgct
aaaacagagggaattgaaatgaaccacctggagacctgtcaggcttttaacgtagcagat
ggactattagtttgcctggttgaaggccagccatctggatttattgtggatggagatgcc
agcctgaacgtgccaatcgctgaagcagaatcagattttgaaaacctgagcgagtatgac
caggatgatgatgatgatgatgaacaagatgttgcagataaggcagacaactttgagagg
acaaatgagagagatattcagcaaactacgagaaactcagaagatgtgatcagtatctca
gaaaatatcaaattgattggttcagtgaaagaggacgacgcttcagtgtgcagcacagca
gactatgagcctgaaccagaaccagtagaggaagaagaaataatagatcctgtggagcca
gagacctgcttcactgacaagtgtgtgctgaaatggccatgtttaactgtggacatcact
gacggcaagggcaagaaatggtggaatctccgtaaaacttgtttcaccgtcgtggaacat
gactggtttgaaaccttcattatttttatgattctcctcagcagtggagctctggccttt
gaagatatctacatagaaagacgtcaaaccatcaagatcattctggagtttgcagacaag
attttcacatacgtctttgtgatagagatgcttcttaaatgggttgcgtatggcttcaag
acatacttcaccaatgcttggtgttggttagactttttcattgtggatatttccctgatt
agtttagttgccagctggatggggtactcggacctcggaccagtcaagtccctcagaacc
ctcagagcactgaggcctctccgagctctgtcgagatttgaaggcatgagggttgtggtg
aacgctcttgttggagcaattccctccatcttcaatgtgctgctggtgtgtctgattttc
tggctcatcttcagcatcatgggggtcaatctgtttgctgggaagttctaccgctgcatc
aacaccaccacagaggagcttttccccataagtgaggtcaacaatcggagtgaatgcttg
gcccttagagaagccacacaggaggctcgatggatcaacatcaaagtcaattatgacaat
gttggacaaggctacctgtctttgcttcaagtggcaacttttaaaggttggatggacatt
atgtatgctgctgtggactcaagagaggttggggagcaaccatcttatgagatcaacctt
tacatgtacttatattttgtcatcttcatcatctttggggctttcttcactttaaacctc
ttcatcggtgttgttattgacaatttcaaccaacaaaagaaaaagtttggagataaagat
ctttttatgactgatgagcaaaagaaatactatgaggccatgaagaaacttggttccaaa
aagccaccaaagccaattccacgcccaaaaaacccgatccagggcttggtgtttgacttc
atcagtcaacagttctttgatatcttcatcatgattctcatttgtctgaatatggtcacc
atgatggtggaaactgatgaccagagtccagagaaggaggattttctttttaaactaaat
gtggcattcatcgttgtcttcactggggagtgtgtgttgaagctgtttgcactgcgacaa
tacttcttcaccaatggatggaacatttttgatttcattgtggtaatcttgtctatagct
ggtacaatgctctcggacttaatcgagaagtactttgtttccccgaccctcttcagggtg
atcaggctagccaggattggaaggattctgcgcgtcattaaaggagctaagggtattcga
acgctcctctttgctctgatgatgtctcttcctgccttattcaacattggtctcctgctc
ttcctcatcatgttcatcttctctatatttgccatgtcaaattttgcctatgtaaaaaag
gaggctgggattgatgacatttttaactttgaaacatttggtggaagcattatttgcttg
tttcagatcacaacttctgcaggttgggatggatttttacttccaatgctgaacagagag
cctccagattgtgatccaacctttgagaacccaggaacagatgtaaaaggcaactgtggc
agcccagtaataggaatggtgtttttctgcagctatattatcgtctctttcttggtagtt
attaacatgtacattgccataatcttagagaacttcaatgtagcacaggaggagagcggc
gatgttctctgtgaggaagactttgagatgttcaacgaaacttgggagaagtttgaccta
aatggaacaatgttcatcaagttcagtcaactctcggagttttgtgacaccttacaggaa
cctctaagggttcccaaacccaatcggtttcacctgattgaaatggatctacctttagtt
atcggggacaggatccactacctggatgttttgttggctgttactcagatggtactggga
gacacagtggagatggcagccatgcagaagagcattgagatgaattttaccctgagcaac
ccaaaaaatgattcctttgcaccagtcatcacaacagtacgccacaaagaagagctaatg
tcttctttcatcattcaaagggcttatcgcagacatctcctgaagcgttgcatacaccat
gctgctttcatgcaccgctcaaagacaatgggcaggaagggtggaggtgatgattctcct
gaaaaagaggggttgcttgcaagaaggatgggggtgctgtatgggagcaatacagacctt
gctgaggaaatggagcgacttgatttacaagctctagcaaaccaagagcatctgaacaca
gaagtgattttatgctgtgatgaagccaaatgtcatcaagagccctcagagccacatatt
gttgttcctgttgaattaacaaacgaggtattattatactctgcccctgatcaacacctc
ttaactttatcaatcctaaaagagtcatctgtatga
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integrated database retrieval system
