Nothobranchius furzeri (turquoise killifish): 107388592
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Entry
107388592 CDS
T05163
Name
(RefSeq) filamin-C-like isoform X1
KO
K27393
filamin-C
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107388592
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nfu04812
]
107388592
Cytoskeleton proteins [BR:
nfu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
107388592
Intermediate filaments
Intermediate filament-binding proteins
107388592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Big_3_5
DUF5060
Cep192_D4
CH_2
CFSR
Motif
Other DBs
NCBI-GeneID:
107388592
NCBI-ProteinID:
XP_015819642
LinkDB
All DBs
Position
sgr13:15890857..15912786
Genome browser
AA seq
2744 aa
AA seq
DB search
MSNNYSNEQLPPQYYQATDFGEEEDDEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKCV
NKTITDLQKDFSDGLKLISLLEVLSHKKMYRKHHIRPNFRQMKLENVSVALEFLDREHIK
LVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDDEDDEETKKLTPKQRLLGWIQNKV
PQLPINNFNRDWRDGKALGALVDNCAPGLCPDWAEWDPNLPVENAREAMQQADDWLGVPQ
VIAPEEIVDPDVDEHSVMTYLSQFPKAKLKPGAPLRPKQLFPDKVKAYGPGIESHGNKVL
QPAIFTVDTLEAGSGEVLVFVEDPEGHKEEAKVKPNKDKNKTYTVTYVPKVEGVHKVKVL
FAGQDTDKSPYTVNVAKVMGDPSKVHARGPGLDPTGNIANKPTYFDIYTAGAGHGDISVV
IIDPQGKKDTVELILENKGDSVFRCTYCPVQEGPHKIHILFAGQEIPKSPYTVNIAEAPA
VAPPTGAPLQIAPQSVLTPPGVKGGKGAPPPKPGRPTINPNACRATGRGLQPKGVRVKEV
ADFKVFTKGAGSGALNVSVKGPTGAEEHVKVQDAGNGVYECEYYPLKAGKYTVSITWGGQ
PIPRSPFEVEVGEEAGVQKVRAWGPGLKTGMVGKSADFVVEAIGTEVGTLGFSIEGPSQA
KIECDDKGDGSCDVRYWPTEPGDYAVHVICDDEDIKDSPFMAHILPAVNGVFPEKVKAYG
PGLLPTGVTVNKPTEFTIDARMAGKGHLKIYAQDAEGCTINIKITDRGDGTFVCVYTPVK
PIKHTIIITWGEVNVPNSPFRVLVGEGSHPDKVKVYGPGVEKTGLKANEPTYFTVDCSEA
GQGDISIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYTPPGAGRYTIMVLFADQEIPI
SPFKVKVDPSHDAGKVRAEGPGLNKTGVEVGTPTHFTIYTKGAGKAKPEVRFAAPGPGEA
VRDFEIIDNHDYSYTVKYTALQQGNMAISVTHGGDPIPKSPFQITVAPALDIGKVKVEGL
DTKVEVGKDQEFTVNTKGAGGQGNVGVKMTSPSGRPIPCKLESDKTKGTHSVKYIPPEEG
QYKVDVSYDGNPVMGSPFGVEAVMPADSSKVRAFGPGLKGGIVGKPAPFTIDTKGAGAGG
LGLTVEGPCEAKIECHDNGDGTCSVSYLPTDAGEYAINILFAEQHIPGSPFKAKVRPAFD
PSKVMASGPGLEKAKAGEPATFTVDCTRAGDAELTIEIVSETGVKAEVHIQKTSEGTFSV
TYIPSFHGSHTITIKYGGHAIPYFPKVLQVEPSLDTSGVHVYGPGVEPRGVLREVTTHFI
VDARALNKAGGSHVKVHIINPSGTNTDSYITDKGDGTYRVEYTAFEDGMHLIEVLYDSTP
VPKSPFRVFVVEGCDPTRVRAFGPGLEGGITNKSNFFTVETRGAGTGGLGLTIEGASEAK
ISCKDNKDGSCSVEYVPFTPGDYDVNITYGGQPIPGSPFHVLVKDPVDPSKVKCSGPGLG
AGVRAHVPQTFTADCTQAGQAPLDVKLYGPTGSVEPVGVKNNGDGTHTVHYTPAQDGPYT
VAVKYADQEVPHSPFKVMSQPGHDASKVRASGPGLDTKGVAASLPVEFTIDARDAGEGLL
TVQILDPEGKPKNATIQDNRDGTYTVSYVPDSTGPYTITIKYGGDEIPYSPYRIQSLPTG
DASKCRLTVSIGGHGVSSLHKLQTSEDTVITVDAKAAGKGKVTCKVLTPQGMELDMDVVE
NHDGTFDIYYTAPEPGKYVITIRFGGQNIPKSPFQVMATNEPVVPRDTVDPLFRPVNFLV
PFTPQQGEITGEVRMPSGKTGRPHITDNKDGTITIKYQPTERGLHEMDIKYDGNHIPGSP
LQFYVDAVNSGVVTAYGPGLSYGTVNKAAAFTVVTKNAGEGGLSLAVEGPSKAEITCKDN
KDGTCTVSYFPTAPGDYSIIVKFDNKHIPGSPFTAKITGDDTITRTSQLNVGTAADVSLK
IAETDLSSLTASIRAPSGNEEPCLLKRLPNRHLGISFTPKEVGEHEVSVRKNGMHVANSP
FKIMVGQSEIGEASRVKAFGKGLVEAHTFEMAEFFVDTRNAGYGGLALSIEGPSKVDINC
EDMEDGTCRVTYCPTEPGSYTVNIKFAEKHIPGSPFTVKVTGEGRIKESITRKRQASSIA
SVGSTCGLNLKIPGNWFQMVSAQERLTRTFTRSSHTYTRTERTEISKTRGGETKREVRVE
ESTQMGGGGGSPFRDVFGDFLGRESLSSFAGITSRPEVESGSQAMTAQVTSPSGKTVDAD
IVDGGSSTYSVRFIPQEIGPHTVNVKYRGQHVPGSPFQFTVGPMGEGGAHKVRAGGPGLA
RGVAGAPSEFSIWTREAGAGGLSIAVEGPSKAEISFEDRKDGSCGVSYIVKEPGDYEVSI
KFNNEHIPDSPFIVPIATLSDEARRLTVTSLQEKDLKVNQEASFMVQRNGARGVVDAKVH
TPSGSCEECYVSELDSDKSAIRFIPRENGVHSIDVKFNGCHIPGSPFNVRVGDPGLIGDP
GMVTALGPGLQGGTTGVPLEFVVNTCNAGSGTLSVNIDGPSKVKMDCRECPEGYRITYTP
MAPGNYLITIKYGGPQHIVGSPFKARITGPRLSGGHSLHETSSVLVETVTKTSKVGGAYS
SSSSTSSTKMMSDASKVVCRGVGLSKALVGQKNTFSVDCSKAGTNMLMVGVHGPQTPCEE
VYVKHMGNKLYNVTYTVKDKGSYTVIVKWGDDNVPGSPYKVAVP
NT seq
8235 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataactacagcaatgagcagctgcctccgcagtactaccaggccacggacttc
ggggaagaagaggacgacgagatgccagccacagagaaggatctagctgaagatgcgccg
tggaagaagatccagcagaacaccttcaccaggtggtgcaatgagcacctcaagtgcgtg
aacaagaccatcaccgacctgcagaaggattttagcgatggactaaagctcatctcgctc
ctggaggtgctgagtcacaagaagatgtacagaaagcaccatatcaggcccaacttccgg
cagatgaagctggagaatgtttctgtggctctggagtttctggacagggagcacatcaaa
ctggtctcaatagacagcaaagccattgttgatgggaatctaaagctgatccttgggctc
atatggacgctcatcctgcactattccatctcaatgcctatgtgggatgacgaagacgat
gaggagacaaaaaagctgactcccaaacaacgtctgctgggctggattcagaacaaggtg
ccccagttgcccatcaacaattttaaccgtgactggcgggatgggaaagccctgggagct
ctggtcgacaactgcgcccctggactgtgtcccgactgggcagagtgggacccaaatctg
cctgtggagaatgccagagaagctatgcaacaggctgatgattggctgggtgtgcctcag
gtgattgcccctgaggaaatcgtggacccagatgtggatgagcactcagtcatgacgtac
ttgtcccagttccccaaggcgaagctgaaacctggggcccctctcagaccaaaacagctg
tttccagacaaggtcaaagcctacggaccgggtattgaatctcatggcaacaaagttctg
cagccagccatcttcacggtggatactctagaagccggcagcggcgaagtcctggtgttc
gtggaggatcctgaaggtcacaaagaggaggctaaagttaaacccaacaaggacaaaaac
aaaacctacactgtcacttatgttccaaaggttgagggcgtccacaaggtgaaggtgctg
tttgcaggtcaggacactgataagagcccctacactgtcaacgtggcaaaggtgatgggt
gacccgagtaaagttcacgctaggggaccgggtctggatccaacaggcaacatagccaac
aaacccacctactttgacatctatacagctggtgctggtcatggtgacatcagtgtggtc
atcattgatcctcagggcaaaaaagacacagtggagctcatcctggagaataagggtgac
agtgtcttccgctgcacctactgtcctgtgcaggaaggccctcacaaaatccacatcctg
tttgcaggccaggagatccccaagagtccttacactgtcaacattgcagaggctccagca
gttgctcctcccacgggagcgccactgcaaatagctcctcagtcagtgctcacccctccg
ggagtgaagggtggcaagggggctcccccaccaaaacctggccgtccaaccataaaccca
aatgcttgcagagctactggcagagggctacagcctaaaggcgtgagagtgaaggaggtt
gcagacttcaaagttttcaccaaaggagctggcagcggtgcactaaacgtctccgtcaaa
ggaccgactggagcagaggagcatgtgaaagtgcaagatgcaggaaatggagtgtatgaa
tgtgaatattacccacttaaggcgggtaaatacacagtgagcatcacctggggaggccag
ccaattccgcgcagcccctttgaggtggaggtaggtgaagaagctggcgttcagaaggtg
agggcctggggtcctggtctgaagaccggcatggtgggaaaatctgcagattttgtggtt
gaggcaatcggcactgaagttggaactctgggcttttccatcgaaggcccatcccaggct
aagattgagtgtgacgataagggtgacggctcctgtgatgtgcgctactggcccactgag
cctggtgactacgctgtccatgtcatctgtgatgacgaagacatcaaggatagtcctttc
atggctcacattctgccagctgtaaatggtgtcttccctgagaaagtaaaagcctacggg
ccaggcttgctgccgactggtgtcactgtaaacaaaccgactgaattcaccattgatgcc
cgcatggctggcaagggtcatctcaagatctacgctcaggacgctgagggttgcaccatc
aacatcaagatcactgacagaggggatggcacgtttgtgtgtgtgtacactcccgtcaaa
cccattaaacacaccatcatcatcacctggggtgaagtcaacgtgccaaacagccccttc
agagtgctggttggagagggctctcatcccgataaagtcaaggtctacgggcccggagtg
gagaagactgggctcaaagctaacgagccaacgtacttcactgtggactgcagcgaagcg
ggtcaaggagacatcagcatcggaatcaagtgcgccccaggggtggtcggaccggctgag
gctgacatcgactttgacatcatcaagaatgacaatgacaccttcactgtcaagtacaca
ccccctggtgcgggccgatacaccatcatggtgctgtttgctgaccaggaaattccaatc
agtcctttcaaagtgaaggtggatccttcccatgatgctggcaaagtgagagcagagggt
cctggtctcaataagacaggtgtggaggtgggtacgccaacacacttcaccatctacaca
aaaggagctggaaaagccaagcctgaggtgcgttttgccgcgccaggccctggagaggca
gttcgtgactttgagatcattgataaccacgattactcctacaccgtcaagtacacggct
cttcagcagggcaacatggctatttctgtgactcatggaggagatcccattcccaaaagc
cctttccaaatcacagtagcaccagctctggatattggaaaggtgaaggtggaagggctg
gataccaaagtggaggtgggaaaagatcaggagttcacagtgaacacaaagggtgcaggt
gggcagggcaacgtaggtgtgaagatgacatccccctctggtcgacccatcccctgcaag
ctggagtcagacaaaaccaaaggcactcacagtgtgaagtacatccctccagaggaagga
cagtacaaggttgatgtgagctatgatgggaaccctgtgatgggtagtccctttggggtt
gaagcagtcatgccagctgattcttcaaaggtaagagcctttggtccaggccttaagggt
ggcattgtgggtaaaccagctccattcactattgacacaaagggagctggtgcaggtgga
cttggcctgacagtagaaggtccctgtgaggctaaaattgagtgccatgacaatggagat
gggacctgctcagtgtcctacctccccactgatgccggcgagtacgccatcaacatcctg
tttgctgagcagcacatccctggctcccctttcaaagccaaagttcgcccagccttcgat
cctagcaaagtaatggccagtgggccgggcctggagaaggccaaggcaggtgaaccagca
accttcaccgtggattgcaccagagcgggtgacgctgagctcaccatcgaaattgtgtcc
gaaactggggttaaagctgaggtgcacatccagaaaacctcagagggtaccttctctgtc
acctacatcccatccttccacggatctcacaccatcaccatcaaatatggtggacacgca
attccctactttccaaaagtattgcaagtggaaccctccttggacaccagtggagttcat
gtctatggtcctggggtggagcctagaggggtcctcagggaagtcacaacccacttcatt
gttgatgcgcgtgcccttaacaaggctggtggcagtcatgtaaaggtccacataatcaac
ccctccggcaccaacacagactcctacattaccgacaagggcgacggcacttacagagtg
gagtacactgcctttgaggatggaatgcatctgattgaggtgctgtatgacagcacgcct
gttcctaaaagccccttcagagtgtttgtggtggagggttgtgatcctacccgggtccgt
gcctttgggccaggtctagagggtggaataaccaacaagtcaaactttttcactgtggaa
accagaggtgctggtactggagggctaggtctgacgattgaaggagcctcagaggcaaaa
atttcctgcaaagacaacaaagatggcagctgcagtgtggaatatgttcccttcactcct
ggagactacgatgtaaatattacctatggaggtcagcccatccctgggagtcctttccat
gtgctggtgaaggacccggtagaccccagcaaggtgaaatgctctggtccaggtctgggc
gctggagtgagagctcacgttcctcagactttcacagcggactgcacccaggctgggcag
gccccgctggacgtcaaactctatggaccaacaggtagtgttgagcctgttggtgtgaag
aacaatggggacggcacccacacagttcactataccccggcacaggacggcccctacact
gtagcggtcaaatatgcagatcaggaagtcccgcacagtccattcaaggtgatgtctcag
cctgggcacgatgccagcaaggttcgtgccagtggcccaggtctagacaccaaaggtgtg
gctgccagcctgcctgtagagtttaccattgatgctcgtgatgctggagaggggctgctc
actgtgcagattctggacccagagggcaagccgaagaatgcgactatccaggataacagg
gatggaacctacacggtgtcctatgtccctgactctacaggaccctacacgatcactatt
aaatacggaggagatgagattccctactccccgtaccgcatccagtccctgcccacaggg
gatgctagcaaatgccgcctcactgtttcaattggaggacacggcgtgtcaagtctccat
aagctgcaaacctccgaggatacagtgatcactgtggatgccaaggcagccggcaaaggc
aaggtgacctgcaaggttctcaccccacaggggatggagttggacatggatgtggtggag
aatcacgacgggacctttgacatctactatacagcccctgaacccgggaaatatgtaatt
accatccgctttgggggccagaacatcccaaagagcccttttcaagtgatggctacaaac
gagccagtggttccccgtgataccgtggatcctctctttcgtcctgtcaacttcctggtg
ccgttcaccccacagcagggagagatcacaggtgaggttcggatgccttctggtaaaacg
ggtcgcccacacatcaccgacaataaggacggcaccatcacgatcaagtaccagcccaca
gaaagaggcctgcatgagatggacatcaaatatgatggaaaccacattccagggagtcct
ctgcagttttatgtggacgctgtgaacagcggagtcgtgactgcttacggtccaggtctg
agttatgggaccgtgaacaaagctgctgctttcactgtggtgaccaagaacgcaggagaa
ggtggtctgtcacttgcagtggagggtccctctaaagctgagatcacctgcaaggacaac
aaagatggcacctgcacagtgtcctacttccccacagcaccaggagactacagcatcatt
gtcaaatttgacaacaagcacattcctggcagcccctttactgccaagatcacaggggat
gataccataaccagaacatcccagctcaatgtcggcactgctgccgacgtgtccctgaag
atcgcggagactgatctgagctctctgactgccagtatcagagctccatcaggcaacgaa
gaaccctgcctgctcaagaggctccccaacagacatcttggcatttctttcaccccgaag
gaggttggagagcatgaagtgagtgtgaggaaaaacggcatgcatgtagcaaacagtcct
tttaaaatcatggttggccagtctgagatcggtgaagccagcagagtgaaggctttcggc
aaaggcctggtggaggcacacacttttgaaatggctgaattttttgtggatacaaggaac
gctggctatggtggactggcattgtcaattgagggtccaagcaaagtagatatcaactgt
gaggacatggaggatggaacgtgcagggtgacatactgccccaccgaaccaggaagttat
accgtcaatatcaagtttgcagaaaaacacatcccaggaagtcctttcacagtgaaggtg
actggagaaggaaggattaaggagagcattaccagaaagagacaggcgtcttctattgcc
tcagtgggcagcacatgtggtcttaacctcaagatccccggaaactggttccagatggtt
tcagcgcaggaaaggctaaccaggacattcacccgcagcagccacacctatacccgcact
gagcggacagagatcagcaagactcgtggtggggagaccaagagggaggtgcgagtggag
gagagcacccagatgggaggaggaggaggaagtcctttcagagatgtttttggagacttt
ctgggcagagagagcctcagcagcttcgctggcatcacctccagaccggaggttgagagc
ggttcccaggccatgacagcacaggtgaccagtcccagtgggaaaacggtggatgctgac
attgtggatggagggagcagcacatacagcgttcgcttcatcccccaggagatcggaccg
cacactgtgaatgtcaaatacagaggacagcacgtacctggaagccccttccagtttaca
gtaggacccatgggggaaggtggagcacacaaggtccgtgcaggaggacctggccttgca
agaggcgtggctggagcgccgtctgaatttagcatttggaccagagaggcaggagccggt
ggcctgtccattgcagtagaaggccccagcaaggctgaaatctcctttgaggacaggaaa
gatggttcttgtggcgtctcctacatagtaaaagagccaggtgactacgaggtgtcaatc
aaattcaacaacgagcacatccctgacagcccgttcatcgttccaattgctacactgtca
gatgaggcccgcaggctcactgtgacaagccttcaggaaaaggatttgaaagtaaaccag
gaggcgtccttcatggtgcaacgcaacggcgcccgcggtgtggttgatgccaaagttcac
acaccctctggctcttgtgaggaatgctacgtctcagagcttgacagcgataagagcgcg
atccgcttcattccacgtgagaatggagttcactccatagatgtcaagttcaatggatgc
cacattcctgggagccccttcaatgtgcgagtaggcgatccagggctgatcggagacccg
gggatggtgactgcacttggtcctgggctgcagggaggaaccacaggcgtacctttggag
tttgtggtcaatacttgtaacgcaggctccggcactctatcggtgaacattgacggtcct
tctaaagttaagatggactgtcgggaatgccctgagggctacaggatcacctacacacca
atggcacctggcaactatctcatcaccatcaaatacggcgggccgcagcacatagtcggc
agccccttcaaagccagaatcacaggcccgaggctttcaggtggacacagcctccacgag
acctcctctgtcttggttgaaacagttaccaaaacctccaaagtgggtggtgcctacagc
tcttcctcctccacctcatcaactaaaatgatgtcggatgccagcaaagtagtttgccgt
ggcgtggggctgtccaaagctttagtggggcagaaaaacacgttttctgttgactgcagc
aaagcaggcaccaacatgctgatggtgggcgtgcacgggccccagactccctgtgaggag
gtgtacgtcaagcacatgggaaacaagctctataacgtcacctacaccgtcaaggacaag
ggcagttacaccgtcatcgtcaaatggggtgatgacaatgtcccaggaagtccttacaaa
gttgctgtaccttaa
DBGET
integrated database retrieval system
