Nothobranchius furzeri (turquoise killifish): 107388870
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Entry
107388870 CDS
T05163
Symbol
cacna2d1
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04010
MAPK signaling pathway
nfu04260
Cardiac muscle contraction
nfu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107388870 (cacna2d1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
107388870 (cacna2d1)
04261 Adrenergic signaling in cardiomyocytes
107388870 (cacna2d1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107388870 (cacna2d1)
Ion channels [BR:
nfu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107388870 (cacna2d1)
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
dCache_1
VWA_3
VWA_2
VWA_CoxE
DUF2201
Cache_3-Cache_2
Motif
Other DBs
NCBI-GeneID:
107388870
NCBI-ProteinID:
XP_015820127
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Position
sgr13:26867871..26979596
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AA seq
1085 aa
AA seq
DB search
MDTCRVQAWVFLLLLCQEGCVSEFPTQLMIKEWVDQMQKELVTLADMATAGRSLTQIFLR
NQHLYTVEQNDADKLVARAARNIEQLLRKRSAALEKLATAAEVFQMEHVWKDEFEDDEIA
YYNSKDNLDANETEGRKYRIRPDFKEDPSYKRLTDHNHTAVHIPTDIYDGSAIVLNELNW
TEALEDVFKRNREDDPTLLWQVFGSATGLARYYPASPWMDARKTPSKIDLYDVRRRPWYI
QGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDFVNVVFFNTRVKNTACFD
HLVQANVRNKKLLKDAVQNITAKGITNYTKGFEFAFQQLNATNISRAYCNKIIMLFTDGG
EERAQFVLEKYNFDKKVRIFTFSVGQHNYDKGPIQWMACSNKGYFYEIPSIGAIRINTQE
YLDVLGRPMVLADKKAKQVQWTNVYLDALELGLVITGTLPVFNRTRTFDERNGEHQNQLI
LGVMAIDVSLDDIKKLTPRFTIGPNGYYFAIDPNGYVLLHPNLQPKNPKFQEPVTLDFLD
AELENDVKVEIRRMMIDGETGEQTINTLVKTQDERYIDRGVRTYTWAPVNGTDYSLALVL
PKYSEHFIQAKLGEDIKQAISSSWGQKAVETLQPEAFDDFGFTYIAPREYCKDLKLSLNN
TEFLLDFHQYIDGNTPDACNESLVSRLILDAGLTAELVKLWKEQTLDGMVARFVATDGGI
TRVYPRSAGEEWAENPETYESSFYKRTLDNEIYIFTAPSFNTDAREPVSESGILVSKAVD
LIVDEVTLKPAVVGVKLNVSFWMNSFINATLKLNCKDEICGCLRNDKQVDCVILDDGGFL
LMSNREEYISLIGQFFGEVDPVLMISLVNTSLYSFNKTYDYQSVCDPEKDSKAAAGPRSI
YVPTIADLLSIGWWASSAAWSMLQQLFVGLLFPNLFKAVESADEDIPDAMFKESCITEQT
QYFFDNDERSYSGTLDCGNCSRLYRAEKIPNTNLVFLITDAKATCLSCDPKPLRQAEQPS
EGPNPCELAQNPRYRKGPDVCFDNNENDEPLCPISRGFTFSFSPFQLFLILTSGKMILTV
EEGTA
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggatacctgcagggtgcaagcctgggtgttcttgcttctattgtgtcaggaggggtgc
gtgtcggagtttccgactcagctcatgatcaaagaatgggttgatcagatgcagaaagag
ctcgtcaccctggcagacatggccacagctggaaggagtctcacccagattttcctgaga
aaccagcacctctacactgtggagcaaaatgatgcagataagctggtggccagagcggcc
aggaacatagaacagctgctgcggaagaggtctgctgccctggagaaactggccacagct
gccgaagtattccagatggaacatgtgtggaaagatgagttcgaggatgatgagattgca
tactacaattcaaaagacaacctggatgcgaatgagacagagggaagaaaatacaggatt
cggccagacttcaaggaggatccatcatataaacgcctgacagatcacaaccacacggct
gtccacatccccactgacatctatgatggctccgccattgtattgaatgaactcaactgg
accgaggcactggaggatgtcttcaaaagaaatagggaagatgacccaacacttctatgg
caagtgtttggcagtgctacaggcctggctcgctattatccagcctccccatggatggat
gctcgaaagacacccagcaaaattgatttatatgatgttcgtagaagaccatggtacatc
caaggagctgcctcacccaaagacatgctgatccttgtggatgcgagtggaagtgtgtct
ggtttgactctgaaactcatcagaacctcagtcagtgagatgctggagactctgtctgat
gatgactttgtcaatgtggttttttttaacaccagggtaaagaacacagcgtgtttcgac
catctggttcaggccaatgtgaggaacaaaaagctgctgaaagatgcagttcagaacatc
acagcgaaaggaatcacaaactacacaaaaggctttgagtttgcttttcagcagctcaat
gcgaccaacatcagcagggcgtactgcaacaaaatcatcatgctgtttacagacggagga
gaagagcgagctcagttcgtactggagaaatacaactttgacaaaaaggtcagaattttt
accttctcagttggacaacacaactacgataaaggaccaattcagtggatggcctgctcc
aataaaggctacttctacgagattccctccattggagccatcagaataaacacacaggag
tacctagacgtcttgggaagacccatggttctagcagacaagaaggccaaacaggtccag
tggactaatgtataccttgatgctctggagttgggactggtcatcactggaacgctgcca
gtcttcaacagaaccaggacctttgatgagaggaatggagagcatcagaatcagctgatt
cttggagttatggcgattgatgtgtctcttgatgatatcaagaagctcacaccacgcttc
acaattggtccaaacggctactactttgccatcgatcccaatggatatgtcctgctgcac
cccaacctccagccaaagaatcctaaattccaggaacctgttactctggactttcttgat
gctgaactggagaatgacgtaaaagtggagataaggagaatgatgatcgatggggaaacg
ggagaacaaactattaacacactggtgaaaactcaggatgagaggtacatagatagagga
gtcaggacctacacatgggcaccagtcaacggaacagattacagcctggcccttgttttg
cctaaatacagtgaacacttcattcaagctaagctgggagaagacataaaacaagccata
tcttcatcttgggggcaaaaagctgtggaaactctgcagccagaggcgtttgatgacttt
ggttttacctacattgctccgagggagtactgcaaagacctgaagctgtctctgaacaac
acagagtttctcctcgactttcaccagtatattgatggaaacaccccagatgcatgcaat
gagtcccttgtgagtcgactgatcctggatgcaggtctgacagctgaactggttaaactt
tggaaagagcagactttggatgggatggtggcaaggtttgttgccacagatggcgggata
acacgagtttatccaagaagtgctggagaggaatgggccgagaatccagagacatacgag
tccagcttctacaaaaggaccttggataatgaaatatacatattcacagctccgtctttc
aacacagatgccagagagcctgtgtctgagtcaggtatccttgtaagcaaagcagtcgac
ctcatcgtggatgaagtcacactcaaaccagcagttgtaggagtgaagcttaatgtttcg
ttttggatgaacagtttcattaatgcaacattgaaactaaattgcaaggatgagatttgt
ggctgtctgaggaatgacaagcaagttgactgcgtgatattggatgatggaggatttctt
cttatgtcaaatcgagaagaatatatttccctgataggtcagttcttcggtgaggtggat
ccagtgctgatgatcagcctagtcaacacatctctgtactccttcaacaagacatatgac
tatcagtctgtctgtgacccagagaaagacagcaaagcagcagctggacctcgatccatc
tatgtgcccactatcgcagacttgctgagtattggttggtgggcctccagcgctgcctgg
tcaatgctacagcagctctttgtcggtctcttgtttcccaacctttttaaagcagtggag
tcagcagacgaagacataccagacgccatgtttaaagaaagctgtatcaccgagcagaca
cagtacttttttgacaacgatgagagatcgtactctggtacactggactgtggaaactgt
tccaggttgtaccgtgcagaaaagattcctaacactaacctggtgtttctaataactgat
gcaaaggcaacgtgtttatcatgtgacccaaagccccttcggcaggccgagcaaccctct
gaaggtccgaatccatgtgagctggctcagaaccccagatatcgcaaaggaccagatgtg
tgttttgacaacaatgaaaatgatgagccactgtgtccaatcagcagaggttttacgttc
agcttctcgccctttcagttgtttctgattctgacttcagggaagatgattctgactgtg
gaggagggaactgcttaa
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