Nothobranchius furzeri (turquoise killifish): 107390329
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Entry
107390329 CDS
T05163
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107390329 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107390329 (nthl1)
Enzymes [BR:
nfu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
107390329 (nthl1)
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107390329 (nthl1)
Prokaryotic type
107390329 (nthl1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
MOV-10_Ig-like
Motif
Other DBs
NCBI-GeneID:
107390329
NCBI-ProteinID:
XP_015822449
UniProt:
A0A1A8U757
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Position
sgr02:complement(7056867..7064068)
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AA seq
419 aa
AA seq
DB search
MSHHDPEANFSSRSMFPSVRCGARSLRSLVRILIMSSPYFTQSRSVITRSSSQSAGVTPA
ASVRSKLFSRQPKTAPPVAVTLEVEEASVSELEPVSVASSAGCDKLKTKPSSERRRKQVK
VEYENHGHLPFKMEFWEPLNWKKQFELIREMRSGRDAPVDEMGAEKCYDTEALPRVRRFQ
VLVSLMLSSQTKDQVTGAAMQKLRAHGCTVENLLATSDEKLGELIYPVGFWRNKVKYLKQ
TSAVLQRDFGGDIPNSVEGLVRLPGVGPKMAHLAMDIAWNQVSGIGVDTHVHRISNRLGW
FRRPTKNPEETRKALEEWLPRELWSEINWLLVGFGQQVCLPVSPLCSSCLNQNICPSAHQ
SSPVKRPKAGSPRSPKSLPFKTKTEPGQELALNDETIKQEPRPETVSYMRPRRKNKCPL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaccacgatcctgaagcgaacttcagctccaggtcgatgtttcctagcgtccgc
tgtggcgcgaggagtctccgttcactggtccggattttgatcatgagctctccgtatttc
acacagagtaggtctgttatcacccgaagtagcagtcaaagcgcaggggtcacacctgcg
gcctctgttaggtccaaactattcagcagacagccgaaaacggctcctcctgtggcggtg
acgctggaggtggaggaggcgagtgtatccgagctggaacccgtctcggtcgcttcttcg
gcgggttgtgacaaactcaaaacaaagccttcctctgaacgtaggaggaaacaagttaag
gtggaatacgagaaccacggtcatttaccttttaagatggagttctgggaacctctgaac
tggaagaagcagtttgaattaatccgtgagatgagaagcggtcgtgatgcacctgtagat
gagatgggagcagaaaagtgctacgacacagaggcgcttccacgtgtgagacgttttcag
gtgttggtgtccctcatgttgtccagtcagactaaagaccaggtgacaggagctgctatg
cagaagcttcgtgctcacggctgcactgtggagaatctactggccacttctgatgagaag
ctgggagaactcatctatcctgttggtttctggaggaacaaggtgaaatatctgaagcag
acctcagctgtgctgcagagggactttggaggagatatcccaaatagtgtggagggactg
gtccggctgccaggagttggacctaaaatggctcaccttgcaatggacatcgcctggaac
caagtgtctggaatcggtgtggacacccacgtccatcgtatctctaaccggctgggctgg
ttcagaagaccaaccaagaatccagaagaaacacgcaaggccctggaggagtggttacct
cgggagctgtggagcgagatcaactggcttctggtgggattcgggcaacaggtttgtctt
cctgtcagccccctgtgctccagttgtctgaaccagaacatctgtccttcagctcatcag
agttctccggtcaaaaggcccaaagctggatcaccgcgctctcccaagagtctccctttt
aaaactaaaactgaacctggacaagaactggctttgaatgatgagaccataaagcaggag
ccacggccagaaacggtttcctacatgagaccaaggaggaaaaacaaatgcccactgtag
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