Nothobranchius furzeri (turquoise killifish): 107391834
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Entry
107391834 CDS
T05163
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04620
Toll-like receptor signaling pathway
nfu04621
NOD-like receptor signaling pathway
nfu04622
RIG-I-like receptor signaling pathway
nfu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107391834 (traf3)
04621 NOD-like receptor signaling pathway
107391834 (traf3)
04622 RIG-I-like receptor signaling pathway
107391834 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107391834 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
Sina_ZnF
zf-C3HC4_2
zf-TRAF_2
zf-RING_4
Crescentin
MctB
FTA4
zf-RING_UBOX
DUF4201
Fez1
Baculo_PEP_C
FapA
zf-RING_6
Snapin_Pallidin
ATG16
Glyco_hydro_4
FlaC_arch
V_ATPase_I
GAS
Motif
Other DBs
NCBI-GeneID:
107391834
NCBI-ProteinID:
XP_015824778
UniProt:
A0A1A8UCL8
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Position
sgr16:14881757..14892595
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AA seq
590 aa
AA seq
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MSSGRSADGREVQIPLQQSAPSLVPPLSSALAIAPPSHRSVNPWTLCEFSTQQGFLPLHG
GFRDHFLETPEAKYCCEACRLVLCQPRQTECGHRFCQSCINDILSLQNPVCPADMEPLFK
DKIFKDVCCHREIMALKVFCRSEANGCQEQMSLQQIPDHLNVCPFFEVPCPLGKCKERMM
RKEIPDHLTWKCKHRESTCEFCMSKMPLTDLQKHKETVCPAFPVSCPNHCSFTSLPRSEL
TSHQHDCPKAQVSCLFQHYGCTFKGLNQDVRQHDSTFAAEHLRMMVKRNCLFENKVEDVK
EELMERYKVLPALSSRLSELETQNEELREKNRQLEQKLATMQKLMSSHSEKLLELELELR
SLRLLREEMENLRGTLENVRTRLSALEQGGRCGAGSTHTLASLETQLSRHDDMLSVHEIR
LADMDLRFQVLETSSYNGTLIWKIRDYKRRKQEAVAGKTLSLYSQPFYTGYFGYKMCARV
YLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFKPDPNS
SSFRRPLAEMNIASGCPLFVSQSVLDTGSYIKDDTIFIKVTVDTSDLPDP
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggggagaagtgctgatgggagggaagtccagatccccctccagcagtcggcg
ccttccctcgtcccccccctgtcctctgcccttgccatcgccccgccctcccaccgctct
gttaacccatggactctgtgtgagttctccacccaacaagggttcctgcccctccatgga
ggattcagagaccacttcttagagacgccagaagccaaatactgctgcgaggcctgcagg
ctggtcctgtgtcagccccgccagactgaatgtggacaccgcttctgtcagagctgcatc
aacgacatcctcagtcttcagaaccccgtgtgtccagcagacatggagcctttgttcaaa
gacaagatcttcaaagatgtctgctgccatcgggagatcatggcgctgaaggtgttctgt
cggagcgaagctaacggttgtcaggagcagatgagtctgcagcagatccctgatcacctg
aatgtctgtccgttcttcgaggttccctgtcctctgggtaaatgtaaagagcgaatgatg
aggaaggagatccccgatcacctgacctggaaatgtaaacacagagagtccacttgtgaa
ttctgcatgagcaagatgcctctgaccgacctgcagaaacacaaggagactgtgtgtcca
gcgttcccggtgtcctgtcccaaccactgctccttcacatccctgcctcgaagcgagctg
accagccaccagcacgactgccccaaggctcaggtcagctgtttgtttcagcactacggc
tgcaccttcaagggtttgaaccaggacgtcagacagcacgactccacctttgcagcagag
catctacggatgatggtcaaaaggaactgcttgtttgagaacaaggtggaggatgtgaaa
gaggagctgatggagcggtacaaggtgcttcctgctctcagcagccgcctgtctgaacta
gagacccagaatgaagagctccgtgagaagaaccggcagctggagcagaaactagccacc
atgcagaaactaatgagctcccactcagagaagctgctggagctggagctggagctgcgt
tctctccgtctgcttagagaagagatggagaacctacgaggaacgctggaaaatgttcga
accaggctcagtgctctggagcaagggggccggtgtggagctggatcaactcatactttg
gcgtccctggagacccagctgagccgccacgatgacatgctgagcgttcacgagatccgg
ttggctgacatggacctgcgttttcaggttctggagacatcgagctacaatgggactcta
atctggaagatccgagattacaagagaaggaaacaggaagcggtggcgggcaagacgctg
tcgctgtactcgcagccgttctacaccggatactttgggtacaagatgtgcgctcgagtt
tatttaaacggagacggaatggggaaggggacgcacctgtccctgttcttcgtggtgatg
aggggggagtatgacgccctgctgccctggccttttaaacagaaggtgaccctgatgctg
atggaccagggtccctctaggaaacacctgggtgatgccttcaaaccagatccaaacagc
agcagcttcaggcgacccttagctgagatgaacatcgcctctggctgtcccctcttcgtg
tctcagagcgtcctggacacaggcagctacatcaaggatgataccatcttcatcaaggtc
accgtggatacgtccgaccttcctgacccctga
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